Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for msxa

Gene Name Gene ID Reads Annotation
msxa msxa 263










Genes with expression patterns similar to msxa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msxa msxa 263 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. KLHL35 ENSDARG00000063577 77 2.731 1.000 - - 0.855 - - 0.876 - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
3. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 2.628 - - - 0.881 - - - 0.876 0.871 hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
4. si:dkey-221j11.3 ENSDARG00000093304 1001 2.47 - - 0.713 - - - 0.794 - 0.963 si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
5. CR848784.2 ENSDARG00000111157 16 2 1.000 - - - - 1.000 - - -
6. NMUR1 NMUR1 30 1.981 1.000 - - - - - - 0.981 -
7. htra1b ENSDARG00000014907 146 1.961 1.000 - - - - - - 0.961 - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
8. CARD11 ENSDARG00000052741 249 1.951 - - - - - - - 0.974 0.977 caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
9. C19H18orf21 C19H18orf21 338 1.937 - - - - - - - 0.955 0.982
10. si:ch73-367f21.6 ENSDARG00000089953 46 1.897 0.905 - - - - 0.992 - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
11. mmp9 ENSDARG00000042816 298 1.896 - - - - - 0.910 - - 0.986 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
12. THEM4 ENSDARG00000061621 364 1.893 - - - 0.901 - - - - 0.992 thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
13. il17rd ENSDARG00000098359 1153 1.856 - - - - - - - 0.889 0.967 interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
14. figf 48 1.851 1.000 - - 0.851 - - - - - c-fos induced growth factor, transcript variant X2
15. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 1.841 - - - - - - - 0.852 0.989 F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
16. si:dkey-106l3.7 ENSDARG00000093444 29 1.823 - - - - - - 0.848 0.975 - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
17. rin1a ENSDARG00000079095 99 1.818 - - - - - 0.910 0.908 - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
18. CABZ01081748.1 ENSDARG00000102139 31 1.817 1.000 - 0.817 - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
19. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 1.812 - - - 0.826 - - - - 0.986 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
20. dkk3b ENSDARG00000070683 209 1.811 - - - - - 0.918 - 0.893 - dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
21. haao ENSDARG00000076487 143 1.802 - - - - - 0.873 - 0.929 - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
22. ZBTB41 ENSDARG00000054984 464 1.795 0.813 - - - - 0.982 - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
23. dmrta2 ENSDARG00000039412 328 1.792 0.871 - - - - - 0.921 - - DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
24. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 1.788 - - - 0.867 - - - 0.921 - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
25. ints10 ENSDARG00000043031 455 1.787 - - - - - - 0.797 - 0.990 integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
26. CABZ01044023.1 ENSDARG00000117734 240 1.786 0.811 - - - - - - 0.975 -
27. nadka_1 ENSDARG00000006577, ENSDARG00000098313 544 1.776 - - - - - 0.875 0.901 - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
28. irak4 ENSDARG00000100534 108 1.776 0.897 - - - - - 0.879 - - interleukin-1 receptor-associated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-738]
29. xdh ENSDARG00000055240 250 1.767 1.000 - - - - - - 0.767 - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
30. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 1.763 - - - 0.812 - - - - 0.951 distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
31. agps ENSDARG00000042821 203 1.759 - - - - - - 0.881 0.878 - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
32. dlx6a ENSDARG00000042291 185 1.751 - - - - - 0.849 - 0.902 - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
33. prkra ENSDARG00000076718 606 1.751 - - - 0.763 - - - - 0.988 protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
34. hbegfa ENSDARG00000075121 1865 1.746 - - - 0.808 - - - - 0.938 heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
35. RPS6KA5 ENSDARG00000060551 109 1.746 - - - - - 0.932 0.814 - - ribosomal protein S6 kinase, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-130530-693]
36. vcana ENSDARG00000103515 611 1.744 0.773 - - - - - - - 0.971 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
37. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 1.744 - - - - - - - 0.769 0.975 bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
38. si:ch211-110p13.9 ENSDARG00000093821 82 1.741 0.823 - - - - - 0.918 - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
39. CACUL1 ENSDARG00000021885 691 1.74 - - - - - - - 0.761 0.979 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
40. asap2b ENSDARG00000019564 1660 1.734 - - - - - - - 0.769 0.965 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
41. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.733 - - - 0.761 - - - - 0.972 RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
42. atp2a3 ENSDARG00000060978 1408 1.725 - - 0.766 - - - - - 0.959 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
43. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.722 - - - - - - - 0.741 0.981 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
44. fam20c fam20c 603 1.72 - - - - - - 0.763 - 0.957
45. zgc:136439 ENSDARG00000009267 720 1.719 - - - - - 0.730 - - 0.989 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
46. ZFAT ENSDARG00000077987 205 1.707 - - - - - 0.819 0.888 - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
47. MPPED1 ENSDARG00000088181 117 1.702 1.000 - 0.702 - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
48. CABZ01068473.1 CABZ01068473.1 67 1.701 - - 0.857 - - 0.844 - - -
49. BX548021.2_1 BX548021.2_1 164 1.697 - - 0.767 - - - 0.930 - -
50. SYTL1 ENSDARG00000070094 282 1.69 - - - - - 0.971 0.719 - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
51. acsl4l acsl4l 540 1.685 - - - 0.913 - 0.772 - - -
52. ippk ENSDARG00000003446 51 1.685 - - 0.704 - - 0.981 - - - inositol 1,3,4,5,6-pentakisphosphate 2-kinase [Source:ZFIN;Acc:ZDB-GENE-050327-41]
53. si:ch211-147d7.5 ENSDARG00000095457 132 1.684 - - - - - 0.720 - 0.964 - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
54. CRP CRP 136 1.682 - - - - - - 0.727 0.955 -
55. gna12a ENSDARG00000025826 1769 1.682 - - - - - 0.730 - - 0.952 guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
56. DIP2C DIP2C 222 1.681 - - - - - 0.858 - 0.823 -
57. mrpl14 ENSDARG00000068886 1991 1.673 - - - 0.734 - - - - 0.939 mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
58. pygl ENSDARG00000002197 192 1.673 - - - - - 0.792 - 0.881 - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
59. si:dkey-92i15.4 ENSDARG00000078387 428 1.669 - - - - - - 0.910 0.759 - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
60. CT573389.2 CT573389.2 1183 1.668 - - - - - - 0.708 - 0.960
61. gnai2b ENSDARG00000017294 686 1.665 0.750 - - - - - - 0.915 - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
62. chic2 ENSDARG00000022690 184 1.663 - - 0.838 0.825 - - - - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
63. fgf24 ENSDARG00000037677 242 1.663 - - - - - - - 0.720 0.943 fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
64. cry1a cry1a 738 1.658 - - - - - 0.790 - 0.868 -
65. zbtb17 ENSDARG00000074548 661 1.656 - - - - - 0.824 - 0.832 - zinc finger and BTB domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-090313-240]
66. BX324198.2 BX324198.2 84 1.653 0.740 - - - - - 0.913 - -
67. CLSTN2 ENSDARG00000060637 41 1.653 0.793 - - - - - 0.860 - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
68. zgc:113102 ENSDARG00000103530, ENSDARG00000113011 86 1.651 0.723 - - - - 0.928 - - - zgc:113102 [Source:ZFIN;Acc:ZDB-GENE-050306-35]
69. aldh3a2a ENSDARG00000028259 591 1.65 - - 0.738 - - - 0.912 - - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
70. ZNF408 ENSDARG00000036043 232 1.644 - - - - - - 0.776 0.868 - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
71. PLCXD1_1 PLCXD1_1 317 1.635 - - - - - 0.791 - 0.844 -
72. arl6ip5b ENSDARG00000016238 1622 1.634 - - - - - 0.740 - - 0.894 ADP-ribosylation factor-like 6 interacting protein 5b [Source:ZFIN;Acc:ZDB-GENE-040718-223]
73. rilpl2 ENSDARG00000024818, ENSDARG00000112872, ENSDARG00000114989 343 1.625 - - - - - 0.796 - 0.829 - Rab interacting lysosomal protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6682]
74. ERCC6L2 ENSDARG00000012403 236 1.62 - - - - - 0.726 - 0.894 - excision repair cross-complementation group 6-like 2 [Source:ZFIN;Acc:ZDB-GENE-110411-274]
75. trip4 ENSDARG00000098074 79 1.616 - - 0.762 0.854 - - - - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
76. CT485993.2 CT485993.2 1419 1.616 - - - - - 0.808 0.808 - -
77. cxcr4a ENSDARG00000057633 1829 1.603 - - - 0.728 - - - - 0.875 chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
78. col4a4 ENSDARG00000002831 803 1.599 0.752 - - 0.847 - - - - - collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
79. si:dkey-87o1.2 ENSDARG00000095796 6602 1.596 - - - - - - - 0.715 0.881 si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
80. lims1 ENSDARG00000026985 2072 1.594 - - - - - 0.788 - - 0.806 LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
81. zgc:153924 507 1.592 - - 0.824 0.768 - - - - - zgc:153924
82. kcnk18 ENSDARG00000057049, ENSDARG00000110571, ENSDARG00000112385 118 1.587 0.761 - - 0.826 - - - - - potassium channel, subfamily K, member 18 [Source:ZFIN;Acc:ZDB-GENE-100405-2]
83. si:rp71-81e14.3 si:rp71-81e14.3 9 1.585 0.838 - - - 0.747 - - - -
84. CABZ01114089.1 CABZ01114089.1 127 1.585 0.823 - - - 0.762 - - - -
85. lmo7a ENSDARG00000004930 2414 1.585 - - 0.714 - - - - - 0.871 LIM domain 7a [Source:ZFIN;Acc:ZDB-GENE-030219-74]
86. CR936200.1 CR936200.1 327 1.584 0.876 - - - - - - 0.708 -
87. SPAG9 ENSDARG00000078142 629 1.578 - - - 0.736 - - 0.842 - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
88. zgc:101663 ENSDARG00000037852 830 1.571 - - - - - 0.845 0.726 - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
89. MYO1D ENSDARG00000036863 768 1.57 - - - 0.759 - - 0.811 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
90. BX927294.1 BX927294.1 361 1.565 - - - 0.776 - - 0.789 - -
91. abcb6a ENSDARG00000063297 264 1.556 - - - 0.748 - 0.808 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-9]
92. si:ch211-263m18.4 ENSDARG00000093353 27 1.552 0.765 - 0.787 - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
93. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.548 0.702 - - 0.846 - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
94. otof otof 127 1.544 0.771 - - - - - 0.773 - -
95. BICD2 ENSDARG00000075571 401 1.542 - - - 0.747 - - 0.795 - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
96. acsl3a ENSDARG00000032079 897 1.539 - - - - - 0.764 - 0.775 - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
97. tmem101 ENSDARG00000114508 494 1.536 - - - 0.749 - - 0.787 - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
98. LRCH1 ENSDARG00000078778 407 1.535 - - - - - 0.707 0.828 - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
99. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.532 - - - - - - 0.765 - 0.767 TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
100. dffb ENSDARG00000009748 204 1.528 0.809 - - - - 0.719 - - - DNA fragmentation factor, beta polypeptide (caspase-activated DNase) [Source:ZFIN;Acc:ZDB-GENE-030826-4]

There are 1973 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA