Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rdh10a

Gene Name Gene ID Reads Annotation
rdh10a ENSDARG00000058730, ENSDARG00000113421 1914 retinol dehydrogenase 10a [Source:ZFIN;Acc:ZDB-GENE-070112-2242]










Genes with expression patterns similar to rdh10a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rdh10a ENSDARG00000058730, ENSDARG00000113421 1914 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinol dehydrogenase 10a [Source:ZFIN;Acc:ZDB-GENE-070112-2242]
2. RABGAP1 ENSDARG00000098967 933 1.735 - 0.999 - - - - 0.736 - - RAB GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-170622-1]
3. dpp4 ENSDARG00000079420 1286 1.714 - 0.998 - - - - 0.716 - - dipeptidyl-peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-081104-277]
4. nt5dc2 ENSDARG00000059646 3878 1.648 - 0.899 - - - - 0.749 - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
5. nav2b ENSDARG00000001879 1121 1.564 - - - - - 0.831 0.733 - - neuron navigator 2b [Source:ZFIN;Acc:ZDB-GENE-061207-13]
6. nrp1a ENSDARG00000102153 4154 1.551 - - - - - 0.808 0.743 - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
7. zgc:158222 ENSDARG00000051873, ENSDARG00000112532 642 1.524 - - - - - 0.761 0.763 - - zgc:158222 [Source:ZFIN;Acc:ZDB-GENE-070112-1522]
8. si:dkey-113d16.9 si:dkey-113d16.9 345 1.501 - - - - - 0.779 0.722 - -
9. mars ENSDARG00000034396 3618 1.494 0.720 - - - - 0.774 - - - methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
10. dio3b ENSDARG00000095767 521 1.48 - - - - - 0.729 0.751 - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
11. si:dkey-183n20.15 ENSDARG00000094265 190 1.468 - - - - - 0.752 0.716 - - si:dkey-183n20.15 [Source:ZFIN;Acc:ZDB-GENE-041001-160]
12. cactin ENSDARG00000059866 553 1.444 0.741 - - - - 0.703 - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
13. cpe ENSDARG00000055874, ENSDARG00000116033 2981 1 - 1.000 - - - - - - - carboxypeptidase E [Source:ZFIN;Acc:ZDB-GENE-090313-68]
14. nanos1 ENSDARG00000109337 2494 0.999 - 0.999 - - - - - - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
15. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 0.999 - 0.999 - - - - - - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
16. STMN3 ENSDARG00000038465 1009 0.999 - 0.999 - - - - - - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
17. MED17 ENSDARG00000006345 779 0.999 - 0.999 - - - - - - - mediator complex subunit 17 [Source:ZFIN;Acc:ZDB-GENE-040302-1]
18. TMPPE ENSDARG00000036059, ENSDARG00000114955 567 0.999 - 0.999 - - - - - - - transmembrane protein with metallophosphoesterase domain [Source:ZFIN;Acc:ZDB-GENE-061013-104]
19. dub ENSDARG00000059774 1026 0.999 - 0.999 - - - - - - - duboraya [Source:ZFIN;Acc:ZDB-GENE-060825-81]
20. ercc6l ENSDARG00000002479 1535 0.999 - 0.999 - - - - - - - excision repair cross-complementation group 6-like [Source:ZFIN;Acc:ZDB-GENE-060531-56]
21. gulp1a ENSDARG00000001733 1206 0.999 - 0.999 - - - - - - - GULP, engulfment adaptor PTB domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-21]
22. NUAK1_1 NUAK1_1 1782 0.999 - 0.999 - - - - - - -
23. SERP1 ENSDARG00000076223 2528 0.999 - 0.999 - - - - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
24. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 0.999 - 0.999 - - - - - - - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
25. creg1 ENSDARG00000105154 843 0.999 - 0.999 - - - - - - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
26. mbnl2 ENSDARG00000018460 3328 0.999 - 0.999 - - - - - - - muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
27. rasef ENSDARG00000076250 1359 0.999 - 0.999 - - - - - - - RAS and EF-hand domain containing [Source:ZFIN;Acc:ZDB-GENE-081105-157]
28. rad21a_1 ENSDARG00000006092 4482 0.999 - 0.999 - - - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
29. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 0.999 - 0.999 - - - - - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
30. stag1b ENSDARG00000062137 1814 0.999 - 0.999 - - - - - - - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
31. acvr2ab ENSDARG00000104700 1569 0.999 - 0.999 - - - - - - - activin A receptor type 2Ab [Source:ZFIN;Acc:ZDB-GENE-120215-23]
32. nup133 ENSDARG00000010078 2373 0.999 - 0.999 - - - - - - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
33. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 0.999 - 0.999 - - - - - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
34. TMEM200B TMEM200B 554 0.999 - 0.999 - - - - - - -
35. si:dkey-197c15.6 ENSDARG00000079401 745 0.999 - 0.999 - - - - - - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
36. dact1 ENSDARG00000101635 1303 0.999 - 0.999 - - - - - - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
37. decr1 ENSDARG00000003869 1344 0.999 - 0.999 - - - - - - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
38. rmi1 ENSDARG00000041376 674 0.999 - 0.999 - - - - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
39. FAM3D ENSDARG00000091625 1392 0.999 - 0.999 - - - - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
40. nit2 ENSDARG00000017590 1393 0.999 - 0.999 - - - - - - - nitrilase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-65]
41. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 0.999 - 0.999 - - - - - - - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
42. CHCHD3 CHCHD3 1425 0.999 - 0.999 - - - - - - -
43. MRPL42 ENSDARG00000079391 1403 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L42 [Source:ZFIN;Acc:ZDB-GENE-101014-1]
44. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 0.999 - 0.999 - - - - - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
45. hccsa hccsa 869 0.999 - 0.999 - - - - - - -
46. lims2 ENSDARG00000014976 1248 0.999 - 0.999 - - - - - - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
47. murca murca 6614 0.998 - 0.998 - - - - - - -
48. surf6 ENSDARG00000035427 1695 0.998 - 0.998 - - - - - - - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
49. ndufa7 ENSDARG00000036684 6051 0.998 - 0.998 - - - - - - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
50. med10 ENSDARG00000070623 5134 0.998 - 0.998 - - - - - - - mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
51. eif4a3 ENSDARG00000102978 16162 0.998 - 0.998 - - - - - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
52. PHLPP1 ENSDARG00000078694 2466 0.998 - 0.998 - - - - - - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
53. me3 ENSDARG00000002305 3305 0.998 - 0.998 - - - - - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
54. CABZ01081490.1 ENSDARG00000111653 11892 0.998 - 0.998 - - - - - - -
55. dyrk1b ENSDARG00000070187 2777 0.998 - 0.998 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
56. riok3 ENSDARG00000042751 3163 0.998 - 0.998 - - - - - - - RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
57. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 0.998 - 0.998 - - - - - - - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
58. hnrnph1l ENSDARG00000005551 8727 0.997 - 0.997 - - - - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
59. atp1b3b ENSDARG00000042837 5163 0.997 - 0.997 - - - - - - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
60. fbl ENSDARG00000053912 5891 0.997 - 0.997 - - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
61. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 0.997 - 0.997 - - - - - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
62. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 0.997 - 0.997 - - - - - - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
63. cnot6 cnot6 7029 0.996 - 0.996 - - - - - - -
64. plscr3b ENSDARG00000069432 8500 0.996 - 0.996 - - - - - - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
65. psmb4 ENSDARG00000054696 8100 0.996 - 0.996 - - - - - - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
66. nfe2l3 ENSDARG00000019810 3682 0.996 - 0.996 - - - - - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
67. txndc17 ENSDARG00000058079 3533 0.995 - 0.995 - - - - - - - thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
68. psmd13 ENSDARG00000016239 4229 0.994 - 0.994 - - - - - - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
69. stab2 ENSDARG00000045748, ENSDARG00000111479 2952 0.993 - 0.993 - - - - - - - stabilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-336]
70. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.993 - 0.993 - - - - - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
71. acsf2 ENSDARG00000061201 4413 0.992 - 0.992 - - - - - - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
72. cox7c ENSDARG00000104537 12169 0.984 - 0.984 - - - - - - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
73. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 0.983 - 0.983 - - - - - - - Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
74. ube2d3 ENSDARG00000038473 4096 0.983 - 0.983 - - - - - - - ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
75. rer1 ENSDARG00000012747 6939 0.982 - 0.982 - - - - - - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
76. coq10b ENSDARG00000056141 1532 0.982 - 0.982 - - - - - - - coenzyme Q10B [Source:ZFIN;Acc:ZDB-GENE-050417-263]
77. sf3b14 sf3b14 9434 0.981 - 0.981 - - - - - - -
78. s100v1 ENSDARG00000070427 6633 0.981 - 0.981 - - - - - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
79. znf706 ENSDARG00000056307 12518 0.98 - 0.980 - - - - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
80. cmn ENSDARG00000055527 14039 0.977 - 0.977 - - - - - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
81. nexn ENSDARG00000057317 10972 0.968 - 0.968 - - - - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
82. eif2a ENSDARG00000101061 3800 0.966 - 0.966 - - - - - - - eukaryotic translation initiation factor 2A [Source:ZFIN;Acc:ZDB-GENE-050626-52]
83. smtnl1 ENSDARG00000041257 7410 0.964 - 0.964 - - - - - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
84. cnbpb ENSDARG00000070922 14606 0.958 - 0.958 - - - - - - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
85. zgc:92518 ENSDARG00000016343 3837 0.95 - 0.950 - - - - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
86. BX005001.1 BX005001.1 741 0.945 - - - - - - 0.945 - -
87. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 0.94 - 0.940 - - - - - - - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
88. slc39a5 ENSDARG00000079525 2157 0.94 - - - - - - 0.940 - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
89. si:ch1073-286c18.5 ENSDARG00000098567 7391 0.937 - 0.937 - - - - - - - si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
90. HNRNPAB HNRNPAB 22267 0.936 - 0.936 - - - - - - -
91. aars ENSDARG00000069142, ENSDARG00000113882 10348 0.933 - 0.933 - - - - - - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
92. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 0.927 - 0.927 - - - - - - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
93. mcm4 ENSDARG00000040041 7971 0.924 - 0.924 - - - - - - - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
94. col9a2 ENSDARG00000024492 20234 0.916 - 0.916 - - - - - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
95. hoxc12a ENSDARG00000070352 7409 0.913 - - - - - - 0.913 - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
96. ddx5 ENSDARG00000038068 35302 0.912 - 0.912 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
97. CABZ01028296.1 CABZ01028296.1 6203 0.9 - 0.900 - - - - - - -
98. cdh6 ENSDARG00000014522 5492 0.899 - - - - - - 0.899 - - cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
99. rpl31 ENSDARG00000053365 55475 0.898 - 0.898 - - - - - - - ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
100. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 0.896 - 0.896 - - - - - - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]

There are 450 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA