Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rag2

Gene Name Gene ID Reads Annotation
rag2 ENSDARG00000052121 15 recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]










Genes with expression patterns similar to rag2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rag2 ENSDARG00000052121 15 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
2. cldnd ENSDARG00000006580 17 2.796 1.000 - - - 0.847 0.949 - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
3. kiaa1549la ENSDARG00000062477 143 2.295 0.823 0.718 - - - - 0.754 - - KIAA1549-like a [Source:ZFIN;Acc:ZDB-GENE-061207-55]
4. zgc:195633_1 142 2 1.000 - - - - - 1.000 - - zgc:195633
5. pcyox1 ENSDARG00000103052 20 1.973 - - - - - 0.973 1.000 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
6. ANGEL1 ENSDARG00000077567 38 1.973 - - - - - 0.973 1.000 - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
7. si:ch211-223a21.3 ENSDARG00000104737 28 1.973 - - - - - 0.973 1.000 - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
8. ascc2 ENSDARG00000013058 228 1.961 1.000 - - - - 0.961 - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
9. zgc:172053 ENSDARG00000038321 9 1.941 1.000 - - - 0.941 - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
10. si:dkey-57a22.12 si:dkey-57a22.12 23 1.937 1.000 - - - - - - 0.937 -
11. si:ch211-26b3.4 ENSDARG00000075491 50 1.929 1.000 - - - - - 0.929 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
12. SCARB2 SCARB2 24 1.924 1.000 - - - - 0.924 - - -
13. Metazoa_SRP_27 Metazoa_SRP_27 2 1.911 1.000 - - - - - - - 0.911
14. si:ch211-57m13.9 ENSDARG00000095884 10 1.911 - - - - - - 1.000 - 0.911 si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
15. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1.902 - 0.902 - - - - 1.000 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
16. si:ch211-71k14.1 ENSDARG00000087061 48 1.899 - 0.899 - - - - 1.000 - - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
17. col8a1b ENSDARG00000003533 18 1.865 - - - - - 0.954 - - 0.911 collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
18. SLITRK4 ENSDARG00000079781 54 1.841 1.000 - - - - - 0.841 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
19. BRINP3 BRINP3 11 1.836 1.000 - - - - - 0.836 - -
20. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.836 1.000 - - - - - 0.836 - -
21. wu:fd60c08 wu:fd60c08 35 1.83 - - - - - 0.830 1.000 - -
22. sdr42e1 ENSDARG00000098838 25 1.817 1.000 0.817 - - - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
23. cxxc4 ENSDARG00000077817 197 1.813 1.000 - - - - - 0.813 - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
24. mxc ENSDARG00000024789 68 1.809 1.000 0.809 - - - - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
25. slc24a1 ENSDARG00000041431 33 1.805 1.000 - - - 0.805 - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
26. CABZ01080492.1 CABZ01080492.1 495 1.796 - - 0.823 - - 0.973 - - -
27. BX323876.2 ENSDARG00000104577 62 1.794 - 0.794 - - - - 1.000 - -
28. lppr2a lppr2a 19 1.792 1.000 - - - - - - 0.792 -
29. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1.782 - 0.809 - - - 0.973 - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
30. PEG3_10 PEG3_10 45 1.782 - 0.809 - - - 0.973 - - -
31. angptl6 ENSDARG00000020265 273 1.772 - 0.809 - - - 0.963 - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
32. CABZ01090303.1 CABZ01090303.1 2 1.768 1.000 - - - - - - 0.768 -
33. CABZ01087549.1 CABZ01087549.1 108 1.754 1.000 - - - - - 0.754 - -
34. trpc1 ENSDARG00000061203 62 1.753 - - - - - 0.920 0.833 - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
35. C8H1orf194 C8H1orf194 111 1.752 - 0.897 - - - - 0.855 - -
36. mxtx1 ENSDARG00000069382 32 1.737 - 0.764 - - - 0.973 - - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
37. CR936465.1 CR936465.1 7 1.719 1.000 - - - - - - 0.719 -
38. kctd3 ENSDARG00000060854 82 1.713 - 0.773 - - - 0.940 - - - potassium channel tetramerization domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-169]
39. MTBP ENSDARG00000090447 174 1.713 - - - - - 0.822 0.891 - - MDM2 binding protein [Source:ZFIN;Acc:ZDB-GENE-120724-1]
40. si:ch73-389b16.2 ENSDARG00000103802 340 1.713 - 0.809 - - - - 0.904 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
41. FLVCR2 FLVCR2 5 1.709 - - - - 0.941 - - 0.768 -
42. CU459160.1 CU459160.1 104 1.708 - - - - - 0.872 0.836 - -
43. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 1.706 - - - - - 0.927 0.779 - - cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
44. tceanc2 ENSDARG00000062919 32 1.696 - - 0.757 - - - - - 0.939 transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
45. nek8 ENSDARG00000045626, ENSDARG00000117017 67 1.672 - - - - - 0.893 0.779 - - NIMA-related kinase 8 [Source:ZFIN;Acc:ZDB-GENE-020509-1]
46. kif5c ENSDARG00000076027 424 1.664 - 0.871 - - - - 0.793 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
47. shisa7 shisa7 181 1.661 0.783 - - - - - 0.878 - -
48. shq1 ENSDARG00000058522 123 1.656 0.956 - - - - 0.700 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
49. c1qtnf4 ENSDARG00000024299 578 1.633 0.921 - - - - - 0.712 - - C1q and TNF related 4 [Source:ZFIN;Acc:ZDB-GENE-050417-198]
50. C7H19orf12_1 C7H19orf12_1 20 1.619 - 0.821 - - - - 0.798 - -
51. immp1l ENSDARG00000045935 175 1.609 - 0.716 - - - 0.893 - - - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
52. BX664622.3 BX664622.3 42 1.607 - 0.809 - - - - 0.798 - -
53. CCHCR1 CCHCR1 238 1.6 - - - - - 0.715 0.885 - -
54. sv2c ENSDARG00000059997 592 1.592 0.754 - - - - - 0.838 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
55. ksr2 ENSDARG00000094526 134 1.582 0.819 - - - - - 0.763 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
56. kifap3a ENSDARG00000008639 721 1.58 - - - - - 0.727 0.853 - - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
57. CR854963.2 ENSDARG00000114235 82 1.576 - - 0.727 - - 0.849 - - -
58. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1.567 0.758 0.809 - - - - - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
59. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 1.567 - 0.714 - - - - 0.853 - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
60. ispd ENSDARG00000005034 173 1.566 0.745 - - - - 0.821 - - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
61. mpg ENSDARG00000069729 43 1.558 0.749 0.809 - - - - - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
62. U11 U11 11 1.555 0.852 - 0.703 - - - - - -
63. fam212ab 454 1.552 - 0.809 0.743 - - - - - - family with sequence similarity 212, member Ab
64. pxmp2 ENSDARG00000003144 50 1.54 - 0.809 0.731 - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
65. BCL6B ENSDARG00000069335 602 1.494 - 0.784 0.710 - - - - - - B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
66. her4.3 ENSDARG00000070770 613 1.445 - 0.705 - - - - 0.740 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
67. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 1.000 - - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
68. kif3cb ENSDARG00000079500 935 1 - - - - - - 1.000 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
69. tbkbp1 ENSDARG00000061473 24 1 - - - - - - 1.000 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
70. BX004873.3 BX004873.3 59 1 - - - - - - 1.000 - -
71. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - - - 1.000 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
72. CABZ01078431.1 CABZ01078431.1 183 1 1.000 - - - - - - - -
73. sp5l ENSDARG00000115868 361 1 - - - - - - 1.000 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
74. edar ENSDARG00000099088 1 1 - - - - - - 1.000 - - ectodysplasin A receptor [Source:ZFIN;Acc:ZDB-GENE-070117-2062]
75. FBF1 FBF1 13 1 1.000 - - - - - - - -
76. wisp1a ENSDARG00000054331 26 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
77. itga6l ENSDARG00000056018 1 1 - - - - - - 1.000 - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
78. zgc:171626 zgc:171626 42 1 1.000 - - - - - - - -
79. CMKLR1_1 CMKLR1_1 2 1 - - - - - - 1.000 - -
80. zswim7 ENSDARG00000067608 179 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
81. CR391967.1 CR391967.1 135 1 - - - - - - 1.000 - -
82. si:dkey-148a12.2 si:dkey-148a12.2 1 1 1.000 - - - - - - - -
83. BPIFC BPIFC 11 1 - - - - - - 1.000 - -
84. zfyve19 ENSDARG00000003642 12 1 1.000 - - - - - - - - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
85. si:rp71-1f1.4 ENSDARG00000092476 11 1 1.000 - - - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
86. gnai3 ENSDARG00000030644 29 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
87. si:dkey-239j18.3 ENSDARG00000089806 12918 1 - - - - - - 1.000 - - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
88. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - - - 1.000 - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
89. TMEM57 TMEM57 260 1 1.000 - - - - - - - -
90. fastkd1 ENSDARG00000056128 141 1 1.000 - - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
91. lrguk ENSDARG00000069698 5 1 1.000 - - - - - - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
92. ciz1a ENSDARG00000089781 20 1 - - - - - - 1.000 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
93. C6H22orf23 C6H22orf23 15 1 - - - - - - 1.000 - -
94. BX005421.3 ENSDARG00000114309 7 1 - - - - - - 1.000 - -
95. APEH ENSDARG00000008703 73 1 1.000 - - - - - - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
96. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
97. nrl ENSDARG00000100466 41 1 1.000 - - - - - - - - neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
98. FNDC7_1 FNDC7_1 3 1 - - - - - - 1.000 - -
99. CABZ01024686.1 CABZ01024686.1 1 1 1.000 - - - - - - - -
100. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 - - - - - - 1.000 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]

There are 1433 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA