Zebrafish data search
Results for rag1
| Gene Name | Gene ID | Reads | Annotation |
|---|---|---|---|
| rag1 | ENSDARG00000052122 | 13 | recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234] |
Genes with expression patterns similar to rag1
| Nr. | Gene Name | Gene ID | Reads | Σ scores | 28hpf trunk1 | 28hpf trunk2 | 28hpf whole1 | 28hpf whole2 | 28hpf whole3 PA | 40hpf trunk1 | 40hpf trunk2 | 40hpf whole embryo1 | 40hpf whole embryo2 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | rag1 | ENSDARG00000052122 | 13 | 6 | 1.000 | - | 1.000 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234] |
| 2. | nfixb | ENSDARG00000061836 | 7 | 1.862 | - | - | - | - | 0.979 | - | - | - | 0.883 | nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000] |
| 3. | tmub2 | ENSDARG00000056467, ENSDARG00000109925 | 100 | 1.726 | 0.772 | - | - | - | 0.954 | - | - | - | - | transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254] |
| 4. | ncs1b | ENSDARG00000054186 | 252 | 1.707 | - | - | 0.943 | - | - | - | - | - | 0.764 | neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1] |
| 5. | lhx2a | ENSDARG00000037964 | 3 | 1.659 | - | - | - | - | - | - | - | 0.788 | 0.871 | LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-091118-109] |
| 6. | or125-4 | ENSDARG00000095417 | 2 | 1.659 | - | - | - | - | - | - | - | 0.788 | 0.871 | odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94] |
| 7. | or115-12 | ENSDARG00000044748 | 2 | 1.659 | - | - | - | - | - | - | - | 0.788 | 0.871 | odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13] |
| 8. | si:ch73-60p2.1 | si:ch73-60p2.1 | 21 | 1.656 | 0.793 | - | - | - | 0.863 | - | - | - | - | |
| 9. | TSPAN1 | ENSDARG00000052027 | 4 | 1.656 | - | - | 0.943 | - | - | - | - | 0.713 | - | tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5] |
| 10. | taar14h | ENSDARG00000090464 | 22 | 1.565 | - | - | - | - | - | - | - | 0.768 | 0.797 | trace amine associated receptor 14h [Source:ZFIN;Acc:ZDB-GENE-041014-32] |
| 11. | pvalb5 | ENSDARG00000032836 | 242 | 1.524 | - | - | - | - | - | - | - | 0.707 | 0.817 | parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336] |
| 12. | PEG3_9 | PEG3_9 | 3 | 1.496 | - | - | 0.708 | - | - | - | - | 0.788 | - | |
| 13. | top3b | ENSDARG00000027586 | 8 | 1.486 | - | - | 0.712 | - | - | - | - | - | 0.774 | DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37] |
| 14. | traf1 | ENSDARG00000069482 | 50 | 1.456 | - | - | 0.739 | - | 0.717 | - | - | - | - | TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4] |
| 15. | klc1a | ENSDARG00000009796 | 10 | 1 | 1.000 | - | - | - | - | - | - | - | - | kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599] |
| 16. | si:dkey-151g22.1 | ENSDARG00000098452 | 1 | 1 | 1.000 | - | - | - | - | - | - | - | - | si:dkey-151g22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-115] |
| 17. | FP245525.1 | FP245525.1 | 3 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 18. | DGKE | ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 | 45 | 1 | 1.000 | - | - | - | - | - | - | - | - | diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7] |
| 19. | SLC4A8 | ENSDARG00000015531 | 16 | 1 | 1.000 | - | - | - | - | - | - | - | - | solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88] |
| 20. | il34 | ENSDARG00000091003 | 14 | 1 | 1.000 | - | - | - | - | - | - | - | - | interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150] |
| 21. | cyp46a2 | cyp46a2 | 38 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 22. | si:dkey-57c22.1 | ENSDARG00000093846 | 12 | 1 | 1.000 | - | - | - | - | - | - | - | - | si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164] |
| 23. | ZNF70_14 | ZNF70_14 | 19 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 24. | zgc:136930 | ENSDARG00000055192 | 1208 | 1 | 1.000 | - | - | - | - | - | - | - | - | zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16] |
| 25. | CDH18 | ENSDARG00000102769 | 4 | 1 | 1.000 | - | - | - | - | - | - | - | - | cadherin 18 [Source:HGNC Symbol;Acc:HGNC:1757] |
| 26. | si:ch1073-416j23.1 | ENSDARG00000055934 | 4 | 1 | 1.000 | - | - | - | - | - | - | - | - | si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35] |
| 27. | CABZ01112732.1 | ENSDARG00000068453 | 4 | 1 | 1.000 | - | - | - | - | - | - | - | - | tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480] |
| 28. | THSD7B | THSD7B | 15 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 29. | lcp2a | ENSDARG00000055955 | 23 | 1 | 1.000 | - | - | - | - | - | - | - | - | lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97] |
| 30. | CR478286.1 | CR478286.1 | 3 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 31. | capn3a | ENSDARG00000041864 | 89 | 1 | 1.000 | - | - | - | - | - | - | - | - | calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97] |
| 32. | ATG4D_1 | ATG4D_1 | 1 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 33. | si:dkey-148b12.4 | si:dkey-148b12.4 | 2 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 34. | irf1b | ENSDARG00000043249 | 30 | 1 | 1.000 | - | - | - | - | - | - | - | - | interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13] |
| 35. | si:dkey-19n13.5 | si:dkey-19n13.5 | 36 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 36. | U2_5 | U2_5 | 5 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 37. | mylka | ENSDARG00000034801 | 133 | 1 | 1.000 | - | - | - | - | - | - | - | - | myosin, light chain kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8207] |
| 38. | fut11 | ENSDARG00000102402 | 56 | 1 | 1.000 | - | - | - | - | - | - | - | - | fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728] |
| 39. | fgf3 | ENSDARG00000101540 | 75 | 1 | 1.000 | - | - | - | - | - | - | - | - | fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178] |
| 40. | CHST15 | ENSDARG00000074527 | 210 | 1 | 1.000 | - | - | - | - | - | - | - | - | carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327] |
| 41. | CR848814.2 | CR848814.2 | 19 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 42. | CR388163.1 | ENSDARG00000096928 | 5 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 43. | ENSDARG00000089996 | ENSDARG00000089996 | 17 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 44. | CABZ01054405.2 | CABZ01054405.2 | 46 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 45. | BX000348.1 | BX000348.1 | 2 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 46. | GAS2 | 18 | 1 | 1.000 | - | - | - | - | - | - | - | - | growth arrest specific 2, transcript variant X1 | |
| 47. | ccdc33 | ENSDARG00000051858 | 11 | 1 | 1.000 | - | - | - | - | - | - | - | - | coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1] |
| 48. | CU302436.1_1 | ENSDARG00000114500 | 18 | 1 | 1.000 | - | - | - | - | - | - | - | - | si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883] |
| 49. | si:ch73-62b13.1 | ENSDARG00000093269 | 11 | 1 | - | - | 1.000 | - | - | - | - | - | - | si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366] |
| 50. | map3k4 | ENSDARG00000104835 | 34 | 1 | 1.000 | - | - | - | - | - | - | - | - | mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4] |
| 51. | atad1b | ENSDARG00000056609 | 40 | 1 | 1.000 | - | - | - | - | - | - | - | - | ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44] |
| 52. | ENKD1 | ENSDARG00000043550 | 44 | 1 | 1.000 | - | - | - | - | - | - | - | - | enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246] |
| 53. | slc4a4b | ENSDARG00000044808 | 9 | 1 | 1.000 | - | - | - | - | - | - | - | - | solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1] |
| 54. | BX649391.1 | BX649391.1 | 2 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 55. | KEL | ENSDARG00000076950 | 159 | 1 | 1.000 | - | - | - | - | - | - | - | - | Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118] |
| 56. | SNORD52 | SNORD52 | 23 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 57. | zgc:165604 | ENSDARG00000021241, ENSDARG00000116203 | 15 | 1 | - | - | - | - | - | - | - | 1.000 | - | zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34] |
| 58. | si:zfos-2548d7.1 | si:zfos-2548d7.1 | 3 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 59. | ZBED1_1 | ZBED1_1 | 3 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 60. | GANC | ENSDARG00000074556 | 36 | 1 | 1.000 | - | - | - | - | - | - | - | - | glucosidase, alpha; neutral C [Source:ZFIN;Acc:ZDB-GENE-130530-754] |
| 61. | si:ch211-11i5.3 | si:ch211-11i5.3 | 7 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 62. | mapre3a | ENSDARG00000020231 | 100 | 1 | 1.000 | - | - | - | - | - | - | - | - | microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88] |
| 63. | BX324198.1 | BX324198.1 | 12 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 64. | si:dkey-53f14.2 | si:dkey-53f14.2 | 4 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 65. | slc25a23b | ENSDARG00000024708 | 51 | 1 | 1.000 | - | - | - | - | - | - | - | - | solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220] |
| 66. | si:ch211-74m13.3 | ENSDARG00000076144 | 55 | 1 | 1.000 | - | - | - | - | - | - | - | - | si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219] |
| 67. | gja3 | ENSDARG00000021889, ENSDARG00000116798 | 49 | 1 | 1.000 | - | - | - | - | - | - | - | - | gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3] |
| 68. | ptger1c | ENSDARG00000078602, ENSDARG00000110042 | 2 | 1 | 1.000 | - | - | - | - | - | - | - | - | prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4] |
| 69. | sumf2 | ENSDARG00000069497 | 51 | 1 | 1.000 | - | - | - | - | - | - | - | - | sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55] |
| 70. | fpgt | ENSDARG00000042139 | 155 | 1 | 1.000 | - | - | - | - | - | - | - | - | fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489] |
| 71. | si:ch211-232d10.3 | ENSDARG00000104008 | 2 | 1 | 1.000 | - | - | - | - | - | - | - | - | si:ch211-232d10.3 [Source:ZFIN;Acc:ZDB-GENE-081103-4] |
| 72. | radil | ENSDARG00000079779 | 14 | 1 | 1.000 | - | - | - | - | - | - | - | - | Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1] |
| 73. | foxa | ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 | 6 | 1 | 1.000 | - | - | - | - | - | - | - | - | forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76] |
| 74. | XKR8 | XKR8 | 9 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 75. | si:dkey-63d15.12 | ENSDARG00000075480 | 9 | 1 | 1.000 | - | - | - | - | - | - | - | - | si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18] |
| 76. | cdh10 | cdh10 | 38 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 77. | ZBED1_3 | ZBED1_3 | 7 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 78. | BX005006.2 | BX005006.2 | 1 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 79. | FCHSD2_1 | FCHSD2_1 | 14 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 80. | si:ch211-76l23.4 | ENSDARG00000096242 | 202 | 1 | 1.000 | - | - | - | - | - | - | - | - | si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310] |
| 81. | TRMT12 | ENSDARG00000060338 | 58 | 1 | 1.000 | - | - | - | - | - | - | - | - | tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182] |
| 82. | si:ch73-119o17.1 | si:ch73-119o17.1 | 6 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 83. | SNORD59 | SNORD59 | 7 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 84. | ccrl1b | ccrl1b | 154 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 85. | gbgt1l3 | ENSDARG00000035555, ENSDARG00000091969 | 91 | 1 | 1.000 | - | - | - | - | - | - | - | - | globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46] |
| 86. | CABZ01088930.1 | CABZ01088930.1 | 20 | 1 | 1.000 | - | - | - | - | - | - | - | - | |
| 87. | si:dkey-253d23.8 | ENSDARG00000094427 | 26 | 0.998 | - | - | - | - | 0.998 | - | - | - | - | si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568] |
| 88. | U5_2 | U5_2 | 1 | 0.99 | - | - | - | - | - | - | - | - | 0.990 | |
| 89. | crygm2d16 | ENSDARG00000076790 | 129 | 0.989 | - | - | - | - | 0.989 | - | - | - | - | crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53] |
| 90. | BX511006.2 | BX511006.2 | 29 | 0.989 | - | - | - | - | 0.989 | - | - | - | - | |
| 91. | purg | ENSDARG00000099187, ENSDARG00000114450 | 33 | 0.984 | 0.984 | - | - | - | - | - | - | - | - | purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3] |
| 92. | si:ch73-381a20.2 | si:ch73-381a20.2 | 11 | 0.984 | 0.984 | - | - | - | - | - | - | - | - | |
| 93. | impact | ENSDARG00000043288 | 7 | 0.983 | - | - | - | - | 0.983 | - | - | - | - | impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10] |
| 94. | si:dkey-196n19.5 | si:dkey-196n19.5 | 6 | 0.983 | - | - | - | - | 0.983 | - | - | - | - | |
| 95. | si:dkey-199f5.4 | ENSDARG00000110483 | 4 | 0.983 | - | - | - | - | 0.983 | - | - | - | - | si:dkey-199f5.4 [Source:ZFIN;Acc:ZDB-GENE-100922-53] |
| 96. | si:dkey-27f16.4 | si:dkey-27f16.4 | 4 | 0.983 | - | - | - | - | 0.983 | - | - | - | - | |
| 97. | PEG3_24 | PEG3_24 | 5 | 0.983 | - | - | - | - | 0.983 | - | - | - | - | |
| 98. | si:dkeyp-9d4.2 | ENSDARG00000029720 | 9 | 0.983 | - | - | - | - | 0.983 | - | - | - | - | si:dkeyp-9d4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-156] |
| 99. | si:dkeyp-72h1.1 | ENSDARG00000095347 | 7 | 0.983 | - | - | - | - | 0.983 | - | - | - | - | si:dkeyp-72h1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-447] |
| 100. | si:ch211-234p6.9 | ENSDARG00000095730 | 3 | 0.983 | - | - | - | - | 0.983 | - | - | - | - | si:ch211-234p6.9 [Source:ZFIN;Acc:ZDB-GENE-060503-33] |
There are 485 more genes with r >= 0.7
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C.
Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA