Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top3b

Gene Name Gene ID Reads Annotation
top3b ENSDARG00000027586 8 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]










Genes with expression patterns similar to top3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top3b ENSDARG00000027586 8 6 - - 1.000 1.000 1.000 1.000 1.000 - 1.000 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
2. si:dkeyp-3f10.17 ENSDARG00000087254 1 2 - - - - - 1.000 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
3. IQGAP3 ENSDARG00000098650 5 2 - - - - 1.000 - - - 1.000 IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
4. PGBD4_4 PGBD4_4 15 2 - - - - - 1.000 1.000 - -
5. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 2 - - - - - 1.000 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
6. PLEKHS1_2 PLEKHS1_2 21 2 - - - - 1.000 - 1.000 - -
7. si:ch211-220b11.4 si:ch211-220b11.4 8 1.916 - - - - 0.916 1.000 - - -
8. si:ch211-105d18.7 si:ch211-105d18.7 6 1.914 - - - 1.000 - - 0.914 - -
9. KCNK17 ENSDARG00000105453 16 1.861 - - - - - 0.861 - - 1.000 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
10. nub1 ENSDARG00000061417 33 1.858 - - - - - 0.954 0.904 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
11. GM2A ENSDARG00000088439 55 1.845 - - - 1.000 - - 0.845 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
12. si:ch211-233h19.2 ENSDARG00000042213 47 1.785 - - - 0.785 - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
13. si:ch211-237l4.6 ENSDARG00000056915 49 1.785 - - - - - 0.871 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
14. CU104716.2 CU104716.2 10 1.781 - - - - 0.781 - 1.000 - -
15. TMBIM1 TMBIM1 2 1.772 - - - - - 1.000 - - 0.772
16. si:ch211-190k17.13 si:ch211-190k17.13 48 1.769 - - - 0.769 - - 1.000 - -
17. si:ch73-248e21.5 ENSDARG00000088283 19 1.723 - - - - - - 1.000 - 0.723 si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
18. gsto1 ENSDARG00000022183 13 1.72 - - - - 0.962 - 0.758 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
19. avpr2aa ENSDARG00000007436 43 1.713 - - - 0.713 - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
20. si:dkey-86e18.1 ENSDARG00000043536 75 1.621 - - - - - 0.717 0.904 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
21. ENSDARG00000092910 ENSDARG00000092910 44 1.602 - - - - - 0.808 0.794 - -
22. si:dkey-165i8.5 si:dkey-165i8.5 21 1.581 - - - - - 0.808 0.773 - -
23. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.57 - - - - 0.750 - 0.820 - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
24. rag1 ENSDARG00000052122 13 1.486 - - 0.712 - - - - - 0.774 recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
25. si:ch211-197n1.2 58 1.476 - - - - - - 0.750 - 0.726 si:ch211-197n1.2, transcript variant X1
26. si:ch211-132g1.6 ENSDARG00000093102 13 1.446 - - - 0.709 - 0.737 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
27. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 1 - - - - - - - - 1.000 WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
28. cd44a ENSDARG00000087863 4 1 - - - 1.000 - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
29. lonrf1 ENSDARG00000075048 13 1 - - - - - 1.000 - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
30. U1_43 U1_43 0 1 - - - 1.000 - - - - -
31. si:dkey-163m14.6 5 1 - - - - 1.000 - - - - si:dkey-163m14.6
32. LRRC69 LRRC69 1 1 - - - - - - 1.000 - -
33. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1 - - - - - 1.000 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
34. BX465203.1 ENSDARG00000113985 8 1 - - - 1.000 - - - - -
35. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
36. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
37. CU570981.1 CU570981.1 9 1 - - - - - 1.000 - - -
38. PSMD2 ENSDARG00000099653 97 1 - - - - - 1.000 - - - proteasome 26S subunit, non-ATPase 2 [Source:HGNC Symbol;Acc:HGNC:9559]
39. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
40. CR387932.1 ENSDARG00000097344 2 1 - - - - - - 1.000 - -
41. BX927362.1 ENSDARG00000097469 13 1 - - - - 1.000 - - - -
42. smad6b ENSDARG00000031763 12 1 - - - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
43. dzank1 ENSDARG00000055787, ENSDARG00000111473 26 1 - - - - - 1.000 - - - double zinc ribbon and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-051113-296]
44. ZC3H12A ENSDARG00000005271 5 1 - - - - - - 1.000 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
45. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
46. si:dkey-220o21.2 si:dkey-220o21.2 19 1 - - - - - 1.000 - - -
47. gata4 ENSDARG00000098952 11 1 - - - - - - 1.000 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
48. ighv14-1 ENSDARG00000096418 17 1 - - - 1.000 - - - - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
49. cyp2n13 ENSDARG00000042953 10 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
50. U1_35 U1_35 1 1 - - - - - - 1.000 - -
51. slc6a18 ENSDARG00000068387 6 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 18 [Source:ZFIN;Acc:ZDB-GENE-080219-9]
52. CU181898.1 CU181898.1 0 1 - - - 1.000 - - - - -
53. tlr20al tlr20al 0 1 - - - - - 1.000 - - -
54. CREBBP CREBBP 8 1 - - - 1.000 - - - - -
55. si:ch211-233m11.3 si:ch211-233m11.3 1 1 - - - - - - 1.000 - -
56. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - 1.000 - - -
57. CU571310.1 ENSDARG00000102580 53 1 - - - - - 1.000 - - - ras-related protein Rab-39A-like [Source:NCBI gene;Acc:100330257]
58. CENPA 63 1 - - - - - 1.000 - - - histone H3-like centromeric protein A
59. fibcd1 ENSDARG00000060393, ENSDARG00000109954 0 1 - - - - - - - - 1.000 fibrinogen C domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070424-245]
60. si:dkey-122c11.1 ENSDARG00000093747 19 1 - - - - - - 1.000 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
61. TRAF2 TRAF2 13 1 - - - 1.000 - - - - -
62. frmd7 ENSDARG00000068958 1 1 - - - - - - - - 1.000 FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
63. EGFLAM 0 1 - - - - - 1.000 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X2
64. slc6a2 ENSDARG00000016141 49 1 - - - - - - 1.000 - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
65. ZBED1 ZBED1 2 1 - - - - - 1.000 - - -
66. fabp10a ENSDARG00000038439 4 1 - - - - - 1.000 - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
67. CLDN10_1 CLDN10_1 71 1 - - - - - - - - 1.000
68. pcdh2aa3 0 1 - - - - - 1.000 - - - protocadherin 2 alpha a 3
69. hcrt ENSDARG00000070932 4 1 - - - 1.000 - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
70. MFAP4_6 MFAP4_6 162 1 - - - - - 1.000 - - -
71. tlr5a ENSDARG00000044415 3 1 - - - 1.000 - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
72. CU183952.2 CU183952.2 6 1 - - - - - 1.000 - - -
73. EFEMP1_1 EFEMP1_1 8 1 - - - - - 1.000 - - -
74. UBXN11 ENSDARG00000053828 22 1 - - - - - 1.000 - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
75. pnp4b ENSDARG00000029230 6 1 - - - - 1.000 - - - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
76. stk32a ENSDARG00000079499 17 1 - - - - - - - - 1.000 serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
77. CR457462.1 CR457462.1 11 1 - - - - 1.000 - - - -
78. BX511021.2 ENSDARG00000097646 5 1 - - - - - - 1.000 - -
79. zgc:158654 19 1 - - - 1.000 - - - - - zgc:158654, transcript variant X1
80. pigr ENSDARG00000101890 10 1 - - - - - - 1.000 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
81. GRINA GRINA 12 1 - - - - - - 1.000 - -
82. CR388132.1 ENSDARG00000097728 61 1 - - - - - 1.000 - - -
83. fasn ENSDARG00000087657 99 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
84. zgc:136924 zgc:136924 0 1 - - - - - - - - 1.000
85. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1 - - - - - 1.000 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
86. or115-15 ENSDARG00000079294 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 15 [Source:ZFIN;Acc:ZDB-GENE-990415-189]
87. si:dkey-261l7.2 ENSDARG00000094345 51 1 - - - - - - 1.000 - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
88. CU468142.1 CU468142.1 6 1 - - - 1.000 - - - - -
89. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B
90. CHD6 ENSDARG00000017244 219 1 - - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
91. gig2p ENSDARG00000088260 5 1 - - - - - - - - 1.000 grass carp reovirus (GCRV)-induced gene 2p [Source:ZFIN;Acc:ZDB-GENE-070705-490]
92. TRIM8 TRIM8 5 1 - - - - - - 1.000 - -
93. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
94. adipoqb ENSDARG00000100086 5 1 - - - - - 1.000 - - - adiponectin, C1Q and collagen domain containing, b [Source:ZFIN;Acc:ZDB-GENE-060825-220]
95. ppp2r3a ENSDARG00000077722 7 1 - - - - - - 1.000 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
96. si:dkey-47k20.6 si:dkey-47k20.6 2 1 - - - - - - 1.000 - -
97. CABZ01054391.1 ENSDARG00000103952 2 1 - - - - - 1.000 - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
98. phf21aa ENSDARG00000006878 31 1 - - - - - - 1.000 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
99. Metazoa_SRP_4 Metazoa_SRP_4 0 1 - - - 1.000 - - - - -
100. si:ch211-244b2.4 ENSDARG00000045530 32 1 - - - - - 1.000 - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]

There are 825 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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