Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pum2

Gene Name Gene ID Reads Annotation
pum2 ENSDARG00000061040 207 pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]










Genes with expression patterns similar to pum2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pum2 ENSDARG00000061040 207 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]
2. arap3 ENSDARG00000076801 725 2.229 0.756 0.759 - 0.714 - - - - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
3. BX537137.1 ENSDARG00000092436 77 1.84 - - - - - 0.863 0.977 - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
4. taf1b ENSDARG00000028937 879 1.803 - - - - - 0.895 0.908 - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
5. gmcl1 ENSDARG00000020948 261 1.754 0.810 - - 0.944 - - - - - germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
6. ddx59 ENSDARG00000022177, ENSDARG00000114618 205 1.723 - 0.776 - 0.947 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:ZFIN;Acc:ZDB-GENE-050208-665]
7. slx4ip ENSDARG00000039069 260 1.675 - - - 0.868 - 0.807 - - - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
8. TMEM150A TMEM150A 975 1.656 0.829 - - 0.827 - - - - -
9. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.651 - - - 0.822 - 0.829 - - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
10. ubox5 ENSDARG00000058563 161 1.648 - 0.701 - 0.947 - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
11. si:ch211-59m15.1 87 1.644 - - - - - 0.862 0.782 - - si:ch211-59m15.1
12. cdc45 ENSDARG00000043720 353 1.643 - - - 0.745 - 0.898 - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
13. ZBTB41 ENSDARG00000054984 464 1.634 - 0.729 - - - 0.905 - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
14. pemt ENSDARG00000103614 474 1.631 - - - 0.745 - 0.886 - - - phosphatidylethanolamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-719]
15. sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 1.615 - 0.726 - 0.889 - - - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
16. PPP1R1B ENSDARG00000076280 352 1.61 - - - 0.828 - 0.782 - - - protein phosphatase 1, regulatory (inhibitor) subunit 1B [Source:ZFIN;Acc:ZDB-GENE-120126-1]
17. pold3 ENSDARG00000076169 694 1.591 - - - 0.851 - 0.740 - - - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
18. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.58 - 0.838 - 0.742 - - - - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
19. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1.58 - 0.718 - - - 0.862 - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
20. rxrab ENSDARG00000035127 231 1.576 - - - 0.758 - 0.818 - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
21. fbxl3b ENSDARG00000021882 58 1.57 - - - - - 0.822 0.748 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
22. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 1.562 - - - 0.734 - 0.828 - - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
23. si:ch211-176m18.1 si:ch211-176m18.1 27 1.561 - - - - - 0.813 0.748 - -
24. si:ch211-162i8.6 si:ch211-162i8.6 15 1.561 0.713 - - - - 0.848 - - -
25. CR559945.3 CR559945.3 1029 1.528 - 0.820 - 0.708 - - - - -
26. strumpellin 212 1.523 - 0.748 - - - 0.775 - - - strumpellin
27. psmf1 ENSDARG00000022652 527 1.518 - - - - - 0.761 0.757 - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
28. kcnk1a ENSDARG00000045067 743 1.505 - 0.713 - - - 0.792 - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
29. SLC46A3 ENSDARG00000077313 162 1.504 - 0.723 - - - 0.781 - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
30. hcn2 hcn2 158 1.49 - - - - - 0.751 0.739 - -
31. ccdc11 ccdc11 79 0.977 - - - - - - 0.977 - -
32. lrrcc1 ENSDARG00000078535 118 0.963 - - - 0.963 - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
33. ARX ARX 71 0.954 - - - 0.954 - - - - -
34. pcdh1gb9 ENSDARG00000088475 71 0.953 - - - 0.953 - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
35. BX324003.4 BX324003.4 24 0.947 - - - 0.947 - - - - -
36. trpa1b ENSDARG00000031875 39 0.945 - - - 0.945 - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
37. itprip ENSDARG00000015576 62 0.945 - - - 0.945 - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
38. CU638738.1 CU638738.1 131 0.945 - - - - - - 0.945 - -
39. NRSN2 NRSN2 57 0.942 - - - 0.942 - - - - -
40. si:dkey-93l1.9 13 0.941 - - - 0.941 - - - - - si:dkey-93l1.9
41. FJX1 ENSDARG00000035873 22 0.94 - - - - - 0.940 - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
42. grm2a ENSDARG00000004150 64 0.939 - - - 0.939 - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
43. ftsjd1 ftsjd1 137 0.939 - - - 0.939 - - - - -
44. NAPB_1 NAPB_1 33 0.939 - - - 0.939 - - - - -
45. rock2b ENSDARG00000004877, ENSDARG00000096433 135 0.937 - - - 0.937 - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
46. olfm1a ENSDARG00000018270 107 0.936 - - - 0.936 - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
47. C24H16orf11 C24H16orf11 32 0.936 - - - 0.936 - - - - -
48. si:dkey-93n13.2 ENSDARG00000092816 119 0.935 - - - - - - 0.935 - - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
49. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 0.935 - - - 0.935 - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
50. minal minal 383 0.934 - - - 0.934 - - - - -
51. lss ENSDARG00000061274 68 0.933 - - - - - 0.933 - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
52. robo4 ENSDARG00000009387 98 0.932 - - - - - - 0.932 - - roundabout, axon guidance receptor, homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020809-1]
53. STEAP2 ENSDARG00000062887 59 0.932 - - - - - - 0.932 - - STEAP family member 2, metalloreductase [Source:ZFIN;Acc:ZDB-GENE-131121-79]
54. zgc:173726 ENSDARG00000077078 250 0.932 - - - 0.932 - - - - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
55. mapk10 ENSDARG00000102730 108 0.932 - - - - - - 0.932 - - mitogen-activated protein kinase 10 [Source:ZFIN;Acc:ZDB-GENE-051120-117]
56. psme3 ENSDARG00000012234, ENSDARG00000111284 113 0.931 - - - 0.931 - - - - - proteasome activator subunit 3 [Source:ZFIN;Acc:ZDB-GENE-991110-19]
57. BX284638.2 BX284638.2 265 0.928 - - - - - - 0.928 - -
58. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 0.927 - - - 0.927 - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
59. nos1apb ENSDARG00000058701 148 0.927 - - - 0.927 - - - - - nitric oxide synthase 1 (neuronal) adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-100824-1]
60. dnah9l ENSDARG00000062630 268 0.927 - - - 0.927 - - - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
61. tmem187 ENSDARG00000051989 136 0.927 - - - 0.927 - - - - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
62. phyh ENSDARG00000086740 88 0.927 - - - 0.927 - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
63. cyth4b ENSDARG00000103984 27 0.926 - - - - - 0.926 - - - cytohesin 4b [Source:ZFIN;Acc:ZDB-GENE-080219-45]
64. si:dkey-152b24.7 ENSDARG00000099715 26 0.926 - - - - - 0.926 - - - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
65. dhcr24 ENSDARG00000013236 61 0.923 - - - - - 0.923 - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
66. si:dkey-261e22.5 si:dkey-261e22.5 68 0.923 - - - 0.923 - - - - -
67. tmem222b ENSDARG00000104097 132 0.923 - - - 0.923 - - - - - transmembrane protein 222b [Source:ZFIN;Acc:ZDB-GENE-090303-4]
68. C12H17orf62_1 C12H17orf62_1 83 0.923 - - - 0.923 - - - - -
69. map3k3 ENSDARG00000060348 1482 0.922 - - - 0.922 - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
70. zgc:111991 zgc:111991 159 0.922 - - - 0.922 - - - - -
71. esrrgb ENSDARG00000011696 108 0.919 - - - - - 0.919 - - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
72. tnfaip3 ENSDARG00000027777 1066 0.919 - - - 0.919 - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
73. zgc:174651 zgc:174651 90 0.919 - - - - - 0.919 - - -
74. si:dkey-191g9.5 ENSDARG00000056080 60 0.919 - - - - - 0.919 - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
75. xkr8.2 ENSDARG00000076820 51 0.919 - - - 0.919 - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
76. klc3 ENSDARG00000055965 116 0.919 - - - 0.919 - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
77. slc6a13l 121 0.918 - - - - - 0.918 - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
78. crb2b ENSDARG00000060081 144 0.917 - - - - - 0.917 - - - crumbs family member 2b [Source:ZFIN;Acc:ZDB-GENE-060610-1]
79. fam43b ENSDARG00000070222 92 0.916 - - - 0.916 - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
80. hsp70l_1 ENSDARG00000055723 72 0.916 - - - 0.916 - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
81. ids ENSDARG00000071699 265 0.916 - - - 0.916 - - - - - iduronate 2-sulfatase [Source:ZFIN;Acc:ZDB-GENE-061215-37]
82. clcn6 ENSDARG00000032577 174 0.914 - - - 0.914 - - - - - chloride channel 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2056]
83. drd4-rs ENSDARG00000001912 45 0.914 - - - - - 0.914 - - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
84. si:dkey-192g7.3 ENSDARG00000094012 105 0.912 - - - 0.912 - - - - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
85. cdc42l2 ENSDARG00000057869, ENSDARG00000109454 181 0.911 - - - 0.911 - - - - - cell division cycle 42 like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-21]
86. TRIM14_2 TRIM14_2 15 0.91 - - - - - 0.910 - - -
87. SPA17 ENSDARG00000069361 141 0.91 - - - 0.910 - - - - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
88. si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 0.91 - - - - - 0.910 - - - si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]
89. srd5a1 ENSDARG00000020509 242 0.909 - - - 0.909 - - - - - steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [Source:ZFIN;Acc:ZDB-GENE-060929-938]
90. rft1 ENSDARG00000060398 146 0.908 - - - 0.908 - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
91. hoxb1a ENSDARG00000008174 462 0.908 - - - - - - 0.908 - - homeobox B1a [Source:ZFIN;Acc:ZDB-GENE-990415-101]
92. VSTM2B VSTM2B 149 0.908 - - - 0.908 - - - - -
93. helb ENSDARG00000053127 235 0.908 - - - 0.908 - - - - - helicase (DNA) B [Source:ZFIN;Acc:ZDB-GENE-030729-16]
94. TKT TKT 298 0.907 - - - 0.907 - - - - -
95. MAPK8IP1_1 MAPK8IP1_1 186 0.907 - - - 0.907 - - - - -
96. adhfe1 ENSDARG00000053518 499 0.906 - - - 0.906 - - - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
97. vav3a ENSDARG00000086623 498 0.906 - - - - - 0.906 - - - vav 3 guanine nucleotide exchange factor a [Source:ZFIN;Acc:ZDB-GENE-091204-266]
98. fam110b ENSDARG00000088073 420 0.906 - - - 0.906 - - - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
99. parp6a ENSDARG00000042703 112 0.906 - - - 0.906 - - - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
100. myo6b ENSDARG00000042141 349 0.905 - - - 0.905 - - - - - myosin VIb [Source:ZFIN;Acc:ZDB-GENE-030318-3]

There are 1171 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA