Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psmc3

Gene Name Gene ID Reads Annotation
psmc3 ENSDARG00000007141 5592 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]










Genes with expression patterns similar to psmc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmc3 ENSDARG00000007141 5592 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
2. plcg1 ENSDARG00000038442 5324 2.384 - - - - - 0.825 0.742 - 0.817 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
3. psmc5 ENSDARG00000015315 8458 2.322 0.776 - - - - 0.772 0.774 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
4. uba1 ENSDARG00000037559 11579 2.308 0.773 - - - - 0.800 0.735 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
5. drg1 ENSDARG00000039345 7545 2.269 0.789 - - - - - 0.713 - 0.767 developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
6. rbbp6 ENSDARG00000037919 4813 2.247 - - - - - 0.726 0.729 - 0.792 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
7. PSIP1 PSIP1 5252 2.231 0.737 - - - - - 0.704 - 0.790
8. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 2.181 - 0.725 - - - 0.709 0.747 - - ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
9. gps1 ENSDARG00000040650 3893 2.168 0.751 0.715 - - - 0.702 - - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
10. mcrs1 ENSDARG00000020840 3232 1.712 - - - - - - 0.871 - 0.841 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
11. zgc:63637 zgc:63637 3636 1.683 - - - - - - 0.832 - 0.851
12. EIF1B ENSDARG00000029445 5034 1.666 - - - - - - 0.748 - 0.918 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
13. mrpl3 ENSDARG00000103318 2308 1.664 - 0.771 - - - - - - 0.893 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
14. ide ENSDARG00000075570 4331 1.646 - 0.762 - - - - 0.884 - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
15. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.637 - - - - - - - 0.744 0.893 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
16. prr12a ENSDARG00000074229 1668 1.629 - - - - - 0.747 - - 0.882 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
17. hnrnpk ENSDARG00000018914 8841 1.625 - - - - - - 0.810 0.815 - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
18. pknox1.1 ENSDARG00000018765 2149 1.619 - - - - - - 0.738 - 0.881 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
19. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.609 - - - - - 0.721 - - 0.888 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
20. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.603 - - - - - - 0.727 - 0.876 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
21. srebf1 ENSDARG00000067607 1537 1.595 - - - - - - 0.819 - 0.776 sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]
22. ube2d2l ENSDARG00000099749 1462 1.592 - 0.723 - - - - - - 0.869 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
23. dut ENSDARG00000106529 3120 1.592 - - - - - - 0.816 - 0.776 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
24. srpr 5148 1.589 - - - - - - 0.705 - 0.884 signal recognition particle receptor (docking protein)
25. psmb7 ENSDARG00000037962 11542 1.588 0.773 - - - - - 0.815 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
26. lypla2 ENSDARG00000053656 8971 1.587 - - - - - 0.728 0.859 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
27. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 1.585 - - - - - - 0.768 - 0.817 ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
28. gse1 ENSDARG00000062020 2337 1.578 - - - - - - 0.713 - 0.865 Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
29. MATR3 MATR3 3962 1.577 - 0.760 - - - - - - 0.817
30. cd99l2 ENSDARG00000056722 5036 1.577 - - - - - - 0.764 - 0.813 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
31. gatad2ab ENSDARG00000006192 2461 1.574 - - - - - - 0.735 - 0.839 GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
32. ssbp4 ENSDARG00000056483 10196 1.571 - - - - - 0.781 0.790 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
33. TAF2 ENSDARG00000102307 1401 1.57 - - - - - 0.705 - - 0.865 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
34. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 1.568 - - - - - 0.709 - - 0.859 ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
35. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.567 - - - - - - 0.791 - 0.776 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
36. MIB1 ENSDARG00000102184 3285 1.565 - - - - - - 0.730 - 0.835 mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
37. KDM6B KDM6B 10265 1.563 - - - - - - 0.710 - 0.853
38. wu:fb17g07 wu:fb17g07 10567 1.563 0.743 - - - - 0.820 - - -
39. anp32e ENSDARG00000054804 11017 1.561 - - - - 0.703 - 0.858 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
40. ank2b ENSDARG00000043313 3065 1.559 - - - - - 0.701 - - 0.858 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
41. tsc22d1 ENSDARG00000038306 2413 1.557 - - - - - 0.711 - - 0.846 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
42. KIF1A KIF1A 1686 1.556 - - - - - - - 0.701 0.855
43. znf865 ENSDARG00000036698 15532 1.556 - - - - - 0.816 0.740 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
44. IM:7163548 IM:7163548 6540 1.555 - - - - - 0.791 0.764 - -
45. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.552 - - - - - - - 0.707 0.845 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
46. PROSER1 ENSDARG00000086302 1935 1.551 - - - - - - 0.710 - 0.841 proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
47. RBM6 ENSDARG00000077060 3521 1.547 - - - - - - 0.726 - 0.821 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
48. pes ENSDARG00000018902 3286 1.546 0.716 - - - - - - - 0.830 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
49. lsm4 ENSDARG00000023852 6083 1.544 - - - - - 0.734 - 0.810 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
50. arid4a ENSDARG00000043873 4176 1.544 - - - - - - 0.732 - 0.812 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
51. CWC15 ENSDARG00000013382 8969 1.543 - 0.766 - - - 0.777 - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
52. psmd11b ENSDARG00000005134 4242 1.543 - 0.704 - - - - 0.839 - - proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
53. sarnp ENSDARG00000059357 4768 1.543 - - - - - 0.727 - - 0.816 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
54. hn1b hn1b 7325 1.539 0.764 - - - - - 0.775 - -
55. ell ENSDARG00000000568 1404 1.533 - 0.703 - - - - - - 0.830 elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
56. ncalda ENSDARG00000070688 5069 1.531 - - - - - - 0.708 - 0.823 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
57. prpf4bb ENSDARG00000040310 2260 1.528 - - - - - 0.701 - - 0.827 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
58. denr ENSDARG00000037229 8370 1.526 - - - - - - 0.752 - 0.774 density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
59. pfn2l ENSDARG00000012682 21690 1.524 0.726 - - - - - 0.798 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
60. snrnp70 ENSDARG00000077126 5921 1.522 - - - - - 0.741 - - 0.781 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
61. actr1 ENSDARG00000011611 3879 1.518 - - - - - 0.772 0.746 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
62. syne2b ENSDARG00000053484 9225 1.516 - 0.778 - - - - 0.738 - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
63. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.516 0.814 0.702 - - - - - - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
64. med10 ENSDARG00000070623 5134 1.512 - - - - - 0.729 0.783 - - mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
65. pbxip1b ENSDARG00000011824 3726 1.512 0.756 - - - - - - - 0.756 pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
66. pbx2 ENSDARG00000019717 6892 1.51 - - - - - - 0.755 - 0.755 pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
67. grpel1 ENSDARG00000010021 3055 1.51 - 0.751 - - - - 0.759 - - GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
68. pl10 pl10 10795 1.509 - - - - - 0.778 0.731 - -
69. angptl4 ENSDARG00000035859 2701 1.508 - - - - - - 0.707 - 0.801 angiopoietin-like 4 [Source:ZFIN;Acc:ZDB-GENE-041111-222]
70. sin3b ENSDARG00000062472 2025 1.508 - - - - - 0.771 - 0.737 - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
71. ppp6c ENSDARG00000002949 2948 1.508 - - - - - 0.714 0.794 - - protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
72. vdac1 ENSDARG00000045132 8051 1.506 - - - - - 0.782 - - 0.724 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
73. mrpl43 ENSDARG00000076334 4045 1.505 0.707 0.798 - - - - - - - mitochondrial ribosomal protein L43 [Source:ZFIN;Acc:ZDB-GENE-040718-125]
74. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.505 - - - - - 0.736 0.769 - - proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
75. hexim1 ENSDARG00000036482 4317 1.504 - 0.711 - - - - 0.793 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
76. smc1al ENSDARG00000058203 8838 1.501 0.774 - - - - 0.727 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
77. GABARAP GABARAP 8341 1.499 - - - - - 0.704 0.795 - -
78. h2afva ENSDARG00000068820 16427 1.498 - - - - - 0.782 0.716 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
79. anp32a ENSDARG00000006487 28249 1.496 - - - - - - 0.777 - 0.719 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
80. rpl22 ENSDARG00000070437 56743 1.491 - - - - - - 0.722 - 0.769 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
81. edf1 ENSDARG00000009950 10518 1.49 - 0.740 0.750 - - - - - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
82. uhrf1 ENSDARG00000103409 3282 1.489 - 0.704 - - - - - - 0.785 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
83. ube2e3 ENSDARG00000012244 8909 1.488 - 0.770 - - - 0.718 - - - ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]
84. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.488 0.736 - - - - - 0.752 - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
85. cops2 ENSDARG00000004785 4911 1.488 - - - - - 0.740 0.748 - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
86. MKI67 ENSDARG00000091150 11038 1.485 - - - - - 0.743 - - 0.742 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
87. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.484 0.706 - - - - 0.778 - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
88. CABZ01111990.1 CABZ01111990.1 4374 1.482 - - - - - - - 0.719 0.763
89. ccdc47 ENSDARG00000054362 5970 1.481 - - - - - 0.711 0.770 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
90. mical3a ENSDARG00000021979, ENSDARG00000097017 1790 1.48 0.743 - - - - - 0.737 - - microtubule associated monooxygenase, calponin and LIM domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-050126-2]
91. chd9 ENSDARG00000074498, ENSDARG00000112964 2603 1.48 - - - - - - 0.761 - 0.719 chromodomain helicase DNA binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-497]
92. cars ENSDARG00000036164 2019 1.48 - - - - - - 0.737 - 0.743 cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
93. gna11b ENSDARG00000053326 5118 1.479 - - - - - 0.763 0.716 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
94. smarca4 smarca4 9726 1.478 - - - - - 0.759 0.719 - -
95. ing4 ENSDARG00000030716 5908 1.47 - 0.726 - - - 0.744 - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
96. tmpoa ENSDARG00000007315 3638 1.47 - - - - - 0.742 0.728 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
97. anp32b ENSDARG00000023330 25013 1.467 - - - - - 0.723 0.744 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
98. BAZ2B BAZ2B 3285 1.466 - - - - - 0.742 0.724 - -
99. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.464 - 0.742 - - - - 0.722 - - cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
100. mibp2 ENSDARG00000101844 17444 1.463 0.718 - - - - - - - 0.745 muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]

There are 1221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA