Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for grpel1

Gene Name Gene ID Reads Annotation
grpel1 ENSDARG00000010021 3055 GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]










Genes with expression patterns similar to grpel1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. grpel1 ENSDARG00000010021 3055 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
2. minos1 ENSDARG00000101619 5273 2.198 0.727 - - - - - 0.719 0.752 - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
3. col4a6 ENSDARG00000052061 8636 1.792 - 0.882 - - - 0.910 - - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
4. snrpb ENSDARG00000011125 11729 1.768 - - - - - - 0.850 0.918 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
5. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.691 - - - - - - 0.772 0.919 - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
6. ppp6r3 ENSDARG00000013379 2912 1.689 - 0.773 - - - - - 0.916 - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
7. ghitm 1443 1.689 - - - - - - 0.731 0.958 - growth hormone inducible transmembrane protein
8. alas1 ENSDARG00000021059 4892 1.681 - - - - - - 0.894 0.787 - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
9. myef2 ENSDARG00000059398 6050 1.66 - 0.803 - - - - - 0.857 - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
10. si:ch211-209n20.57 si:ch211-209n20.57 1188 1.649 - - - - - - 0.716 0.933 -
11. ctsz ENSDARG00000043081 1073 1.644 - - - - - - 0.719 0.925 - cathepsin Z [Source:ZFIN;Acc:ZDB-GENE-041010-139]
12. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.644 - 0.714 - - - - - 0.930 - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
13. ube2z ENSDARG00000029215 1059 1.642 - - - - - 0.715 - 0.927 - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
14. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.612 - 0.730 - - - - - 0.882 - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
15. uggt1 ENSDARG00000054746 2060 1.576 - 0.738 - - - - 0.838 - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-619]
16. pafah1b1a ENSDARG00000032013 3183 1.57 - - - - - 0.703 - 0.867 - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
17. gna11b ENSDARG00000053326 5118 1.553 - 0.749 - - - - - 0.804 - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
18. ilk ENSDARG00000056964 6686 1.541 - 0.728 - - - - 0.813 - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
19. celf1 ENSDARG00000005315 5598 1.539 - - - - - - 0.737 0.802 - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
20. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.523 - 0.752 - - - - 0.771 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
21. MRPS12_1 MRPS12_1 2714 1.517 - 0.788 - - - - 0.729 - -
22. psmc3 ENSDARG00000007141 5592 1.51 - 0.751 - - - - 0.759 - - proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
23. eif3m ENSDARG00000013931 8117 1.497 - 0.796 - - - - - 0.701 - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
24. btg2 ENSDARG00000020298 6616 1.472 - 0.702 - - - - - 0.770 - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
25. vamp5 ENSDARG00000068262 2413 1.457 - 0.746 - - - 0.711 - - - vesicle-associated membrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4209]
26. nudcd2 ENSDARG00000078059, ENSDARG00000109490 2234 1.456 - - - 0.710 - - 0.746 - - NudC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-49]
27. samm50 ENSDARG00000045814 4511 1.455 - 0.724 - - - - - 0.731 - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
28. tmem14c tmem14c 1649 1.454 - 0.719 - - - - 0.735 - -
29. col11a1b ENSDARG00000009014 9998 1.443 - 0.728 - - - - 0.715 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
30. grip1 ENSDARG00000015053 1275 1.428 - 0.716 - - - 0.712 - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
31. ndufs6 ENSDARG00000056583 7220 1.422 - 0.703 - - - - 0.719 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
32. usp36 ENSDARG00000032327 1884 1.412 - 0.702 - - - 0.710 - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
33. fbxw5 ENSDARG00000099139 2802 1.411 - 0.707 - - - 0.704 - - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
34. slc25a12 ENSDARG00000102362 2773 1.41 - - - - - 0.702 0.708 - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
35. CU571336.1 ENSDARG00000099892 2164 0.998 - - - - - 0.998 - - -
36. fmr1 ENSDARG00000037433 5132 0.996 - - - - - 0.996 - - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
37. PHB2 PHB2 3755 0.995 - - - - - 0.995 - - -
38. zgc:153662 zgc:153662 4604 0.986 - - - - - 0.986 - - -
39. slc6a9 ENSDARG00000018534 4089 0.982 - - - - - 0.982 - - - solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:ZFIN;Acc:ZDB-GENE-050105-3]
40. rab43 ENSDARG00000059404 1118 0.969 - - - - - - - 0.969 - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
41. cetn2 ENSDARG00000101510 541 0.969 - - - - - - - 0.969 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
42. U6 U6 931 0.967 - - - - - - - 0.967 -
43. GRM2 GRM2 372 0.966 - - - - - - - 0.966 -
44. brd1a ENSDARG00000013596, ENSDARG00000116694 547 0.966 - - - - - - - 0.966 - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
45. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.966 - - - - - - - 0.966 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
46. bsk146 ENSDARG00000099069 274 0.966 - - - - - - - 0.966 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
47. psmd5 ENSDARG00000059046 622 0.966 - - - - - - - 0.966 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
48. GANAB_1 GANAB_1 685 0.966 - - - - - - - 0.966 -
49. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.965 - - - - - - - 0.965 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
50. nkain4 ENSDARG00000062699 377 0.965 - - - - - - - 0.965 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
51. TTC28 ENSDARG00000114920 580 0.965 - - - - - - - 0.965 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
52. sh3bp5a ENSDARG00000100529 642 0.965 - - - - - - - 0.965 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
53. CR354611.2 CR354611.2 2040 0.964 - - - - - - - 0.964 -
54. THEM4 ENSDARG00000061621 364 0.964 - - - - - - - 0.964 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
55. map7d2b ENSDARG00000045316 702 0.964 - - - - - - - 0.964 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
56. MDFIC ENSDARG00000074223 781 0.964 - - - - - - - 0.964 - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
57. ankrd10b ENSDARG00000004771 654 0.964 - - - - - - - 0.964 - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
58. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.964 - - - - - - - 0.964 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
59. lrrc4.2 ENSDARG00000003020 235 0.964 - - - - - - - 0.964 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
60. si:ch211-113e8.11 ENSDARG00000076585 721 0.964 - - - - - - - 0.964 - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
61. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.964 - - - - - - - 0.964 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
62. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.964 - - - - - - - 0.964 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
63. zgc:171727 ENSDARG00000105781 350 0.964 - - - - - - - 0.964 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
64. mapre3b ENSDARG00000102878 362 0.964 - - - - - - - 0.964 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
65. ZNF784_2 ZNF784_2 181 0.963 - - - - - - - 0.963 -
66. ezh1 ENSDARG00000037894 294 0.963 - - - - - - - 0.963 - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
67. tchp ENSDARG00000035605 1695 0.963 - - - - - - - 0.963 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
68. rapgef1a ENSDARG00000043593 416 0.963 - - - - - - - 0.963 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
69. SIPA1L3 ENSDARG00000061699 268 0.963 - - - - - - - 0.963 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
70. KIRREL3 ENSDARG00000115903 206 0.963 - - - - - - - 0.963 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
71. RBM33 RBM33 1954 0.963 - - - - - - - 0.963 -
72. irf2a ENSDARG00000007387 915 0.963 - - - - - - - 0.963 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
73. epb41a ENSDARG00000099283 860 0.963 - - - - - - - 0.963 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
74. wdr92 ENSDARG00000037334 329 0.963 - - - - - - - 0.963 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
75. XKR7 ENSDARG00000026333 175 0.963 - - - - - - - 0.963 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
76. smad7 ENSDARG00000016858 1660 0.963 - - - - - - - 0.963 - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
77. ppp1r8 ppp1r8 310 0.963 - - - - - - - 0.963 -
78. ift20 ENSDARG00000040556 285 0.963 - - - - - - - 0.963 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
79. anapc5 ENSDARG00000008461 434 0.963 - - - - - - - 0.963 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
80. PRRT2 ENSDARG00000103588 913 0.962 - - - - - - - 0.962 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
81. suco ENSDARG00000016532 1609 0.962 - - - - - - - 0.962 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
82. chd5 ENSDARG00000105083 132 0.962 - - - - - - - 0.962 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
83. SB:CB827 SB:CB827 245 0.962 - - - - - - - 0.962 -
84. eef1a1a ENSDARG00000039502 234 0.962 - - - - - - - 0.962 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
85. MANEAL ENSDARG00000056450 262 0.962 - - - - - - - 0.962 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
86. wdr47a ENSDARG00000078136 522 0.962 - - - - - - - 0.962 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
87. gltscr1l gltscr1l 782 0.962 - - - - - - - 0.962 -
88. xkr6 xkr6 286 0.962 - - - - - - - 0.962 -
89. actn2 actn2 1054 0.961 - - - - - - - 0.961 -
90. grna ENSDARG00000004954 189 0.961 - - - - - - - 0.961 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
91. dok7 ENSDARG00000060236 364 0.961 - - - - - - - 0.961 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
92. BX322612.1 BX322612.1 236 0.961 - - - - - - - 0.961 -
93. plk4 ENSDARG00000004576 688 0.961 - - - - - - - 0.961 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
94. SBNO2 SBNO2 773 0.961 - - - - - - - 0.961 -
95. fzd3b ENSDARG00000058692 627 0.961 - - - - - - - 0.961 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
96. ndnl2 ENSDARG00000058212 1042 0.96 - - - - - - - 0.960 - necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]
97. tnika ENSDARG00000056218 728 0.96 - - - - - - - 0.960 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
98. CABZ01073424.1 ENSDARG00000107858 688 0.96 - - - - - - - 0.960 -
99. sgsm3 ENSDARG00000019038 352 0.96 - - - - - - - 0.960 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
100. DEDD ENSDARG00000029783 530 0.96 - - - - - - - 0.960 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]

There are 782 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA