Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psen1

Gene Name Gene ID Reads Annotation
psen1 ENSDARG00000004870 1590 presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]










Genes with expression patterns similar to psen1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psen1 ENSDARG00000004870 1590 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]
2. hgs ENSDARG00000020960 3574 2.191 - - - - - 0.724 0.703 - 0.764 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
3. adam17b ENSDARG00000093093 792 1.696 - - - - - 0.802 - - 0.894 ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
4. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.696 - - - - - 0.829 - - 0.867 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
5. eya3 ENSDARG00000036100 1965 1.693 - - - - - 0.806 - - 0.887 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
6. ube3d ENSDARG00000026178 244 1.689 - - - - - 0.805 - - 0.884 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
7. otub1b ENSDARG00000011462 4329 1.67 - - - - - 0.825 - - 0.845 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
8. bre bre 1233 1.663 - - - - - 0.815 - - 0.848
9. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.659 - - - - - 0.854 0.805 - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
10. eml3 ENSDARG00000058038 449 1.647 - - - - - 0.793 - - 0.854 echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
11. bmper ENSDARG00000101980 668 1.644 - - - - - 0.759 - - 0.885 BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
12. kifc1 ENSDARG00000001558 6658 1.642 - - - - - - 0.740 - 0.902 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
13. eps15l1a ENSDARG00000042670 1565 1.64 - - - - - 0.799 - - 0.841 epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
14. dnajb9a ENSDARG00000052072 578 1.633 - 0.866 - 0.767 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
15. derl1 ENSDARG00000021905 4698 1.632 - - - - - 0.732 - - 0.900 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
16. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.63 - - - - - 0.751 - - 0.879 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
17. apmap ENSDARG00000017422 2692 1.625 - - - - - 0.767 - - 0.858 adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
18. aqr ENSDARG00000016775 1581 1.622 - - - 0.723 - - - - 0.899 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
19. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.619 - - - - - 0.771 - - 0.848 zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
20. CEP152 ENSDARG00000075725 391 1.615 - 0.726 - - - - - - 0.889 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
21. setd5 ENSDARG00000078576 1974 1.61 - - - - - 0.803 - - 0.807 SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
22. polr2gl ENSDARG00000056127 1771 1.61 - - - - - - - 0.715 0.895 polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
23. exoc7 ENSDARG00000087229 987 1.61 0.794 - - - - 0.816 - - - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
24. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.601 - - - - - - 0.815 - 0.786 WD repeat domain 44 [Source:NCBI gene;Acc:569045]
25. tmed8 ENSDARG00000052390 469 1.599 - 0.845 - - - 0.754 - - - transmembrane p24 trafficking protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-283]
26. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 1.598 - - - 0.729 - 0.869 - - - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
27. gb:ai877918 ENSDARG00000100179 173 1.596 - 0.788 - 0.808 - - - - - expressed sequence AI877918 [Source:ZFIN;Acc:ZDB-GENE-090506-8]
28. CABZ01087568.1 CABZ01087568.1 1487 1.588 - 0.713 - - - - - - 0.875
29. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.586 - - - - - - 0.753 - 0.833 ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
30. tmem167a ENSDARG00000035914 3319 1.58 - - - - - 0.854 0.726 - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
31. MATR3 MATR3 3962 1.579 - - - - - - 0.784 - 0.795
32. trim16 ENSDARG00000010673 519 1.579 0.709 - - - - - - - 0.870 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
33. appl1 1019 1.573 - - - 0.820 - 0.753 - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
34. birc2 ENSDARG00000044619, ENSDARG00000117094 1376 1.567 - - - - - - 0.701 - 0.866 baculoviral IAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-030825-6]
35. kif15 ENSDARG00000012073 1936 1.564 - 0.709 - - - - - - 0.855 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
36. zfand6 ENSDARG00000098443 2507 1.563 - - - - - - 0.777 - 0.786 zinc finger, AN1-type domain 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8405]
37. DLC1 ENSDARG00000079317 2149 1.563 - - - - - - 0.741 - 0.822 DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
38. wdr45 ENSDARG00000090219 829 1.554 - 0.709 - - - - - - 0.845 WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
39. nt5c2b ENSDARG00000058231 3822 1.552 - - - - - - 0.744 - 0.808 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
40. rab20 ENSDARG00000005049 346 1.532 0.808 0.724 - - - - - - - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
41. setd4 ENSDARG00000036592 237 1.527 - 0.751 - - - 0.776 - - - SET domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050808-2]
42. si:ch211-226m16.2 ENSDARG00000036785 2163 1.521 - 0.758 - - - - 0.763 - - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
43. acaa2 ENSDARG00000038881 2649 1.521 - - - - - - 0.786 - 0.735 acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
44. TCEB3 2429 1.512 - - - - - - 0.706 - 0.806 transcription elongation factor B (SIII), polypeptide 3
45. CR936975.4 CR936975.4 235 1.511 - 0.748 - - - 0.763 - - -
46. FP236513.2 FP236513.2 443 1.504 0.751 0.753 - - - - - - -
47. slc35b3 ENSDARG00000045437 370 1.502 - 0.752 - - - 0.750 - - - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 [Source:ZFIN;Acc:ZDB-GENE-060312-46]
48. psmd1 ENSDARG00000003189 4373 1.484 - - - - - 0.741 - - 0.743 proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
49. nckap1 ENSDARG00000060853 3540 1.481 - - - - - - 0.770 - 0.711 NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
50. f2rl1.2 ENSDARG00000077540 822 1.481 - - - 0.738 - 0.743 - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
51. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.48 - - - - - - 0.758 0.722 - zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
52. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.469 - - - - - - 0.703 0.766 - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
53. CAMTA2 ENSDARG00000092799 1950 1.462 - 0.710 - - - 0.752 - - - calmodulin binding transcription activator 2 [Source:ZFIN;Acc:ZDB-GENE-090313-6]
54. gli2a ENSDARG00000025641 2154 1.459 - 0.745 - - - - 0.714 - - GLI family zinc finger 2a [Source:ZFIN;Acc:ZDB-GENE-990706-8]
55. itm2ba ENSDARG00000007098 5686 1.457 - 0.720 - - - - - - 0.737 integral membrane protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2352]
56. leo1 ENSDARG00000055357 1644 1.447 - - - - - 0.737 0.710 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
57. NUP54 ENSDARG00000103296 433 1.439 - 0.738 - 0.701 - - - - - nucleoporin 54 [Source:ZFIN;Acc:ZDB-GENE-040426-2263]
58. si:dkey-58f10.7 ENSDARG00000091972, ENSDARG00000093350 152 1.433 - - - 0.731 - 0.702 - - - si:dkey-58f10.7 [Source:ZFIN;Acc:ZDB-GENE-060526-321]
59. tshz3a ENSDARG00000087394 2455 1.419 - - - 0.718 - 0.701 - - - teashirt zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-100322-1]
60. rab14 ENSDARG00000074246 4084 0.939 - - - - - 0.939 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
61. sox5 ENSDARG00000011582 3632 0.932 - - - - - - - - 0.932 SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
62. UBL4A UBL4A 1115 0.929 - - - - - - - - 0.929
63. ppt2 ENSDARG00000104542 888 0.923 - - - - - - - - 0.923 palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
64. timeless ENSDARG00000078497 1114 0.92 - - - - - 0.920 - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
65. pdzrn3b ENSDARG00000073869 1566 0.916 - - - - - - - - 0.916 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
66. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 0.912 - - - - - - - - 0.912 fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
67. ifrd1 ENSDARG00000068708 2858 0.91 - - - - - - - - 0.910 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
68. NUMA1_2 NUMA1_2 2897 0.91 - - - - - - - - 0.910
69. brms1lb ENSDARG00000018047 453 0.908 - - - - - - - - 0.908 BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
70. fam222a ENSDARG00000090797 566 0.907 - - - - - - - - 0.907 family with sequence similarity 222, member A [Source:ZFIN;Acc:ZDB-GENE-050309-42]
71. nr2f6a ENSDARG00000003607 4779 0.907 - - - - - - - - 0.907 nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
72. ikbkb ENSDARG00000079123 498 0.906 - - - - - - - - 0.906 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
73. CCDC106 CCDC106 1908 0.906 - - - - - - - - 0.906
74. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 0.906 - - - - - - - - 0.906 FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
75. wu:fj29h11 ENSDARG00000096562 863 0.906 - - - - - - - - 0.906 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
76. zgc:113348 ENSDARG00000103795 1351 0.905 - - - - - - - - 0.905 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
77. eef2a.1 ENSDARG00000042094 1781 0.905 - - - - - - - - 0.905 eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
78. pabpn1 ENSDARG00000045373 4876 0.904 - - - - - - - - 0.904 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
79. st8sia2 ENSDARG00000018788 2183 0.903 - - - - - - - - 0.903 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
80. ngly1 ENSDARG00000003205 733 0.903 - - - - - - - - 0.903 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
81. tmem59l ENSDARG00000003655 1536 0.902 - - - - - - - - 0.902 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
82. pif1 ENSDARG00000020289 216 0.902 - - - - - - - - 0.902 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
83. hic1l ENSDARG00000045660 1489 0.902 - - - - - - - - 0.902 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
84. rbm45 ENSDARG00000063731 504 0.902 - - - - - - - - 0.902 RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]
85. paxip1 ENSDARG00000005606 1417 0.901 - - - - - - - - 0.901 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
86. ptprk ENSDARG00000063416 742 0.901 - - - - - - - - 0.901 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
87. cenpk ENSDARG00000039616 744 0.901 - - - - - - - - 0.901 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
88. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 0.901 - - - - - - - - 0.901 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
89. bahcc1 bahcc1 1934 0.9 - - - - - - - - 0.900
90. klhdc10 ENSDARG00000007764 529 0.9 - - - - - - - - 0.900 kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
91. foxred2 ENSDARG00000061354 718 0.9 - - - - - - - - 0.900 FAD-dependent oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1026]
92. rbm34 ENSDARG00000101877 1573 0.899 - - - - - - - - 0.899 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
93. umps ENSDARG00000012215 4564 0.899 - - - - - - - - 0.899 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
94. ror1 ENSDARG00000015176 378 0.899 - - - - - - - - 0.899 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
95. naa25 ENSDARG00000075446 1505 0.899 - - - - - - - - 0.899 N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-041111-190]
96. jph3 ENSDARG00000102204 175 0.898 - - - - - - - - 0.898 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
97. rab11fip3 ENSDARG00000016490 661 0.898 - - - - - - - - 0.898 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
98. TAF2 ENSDARG00000102307 1401 0.898 - - - - - - - - 0.898 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
99. pcnxl3 pcnxl3 756 0.897 - - - - - - - - 0.897
100. C7H11orf68 C7H11orf68 446 0.897 - - - - - - - - 0.897

There are 1388 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA