Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for prdm1b

Gene Name Gene ID Reads Annotation
prdm1b ENSDARG00000098925 440 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]










Genes with expression patterns similar to prdm1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prdm1b ENSDARG00000098925 440 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
2. fabp11b ENSDARG00000002311 354 4.299 - - 0.807 0.804 0.812 - - 0.956 0.920 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
3. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 4.073 - 0.874 0.811 0.712 0.772 - - 0.904 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
4. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 3.348 - - 0.850 0.829 0.822 - - - 0.847 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
5. rx2 ENSDARG00000040321 112 2.751 - - 0.866 0.943 - - - - 0.942 retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
6. fezf1 ENSDARG00000010270 379 2.639 - - - 0.847 0.860 - - 0.932 - FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
7. atoh7 ENSDARG00000069552 254 2.562 - - 0.809 0.822 - - - - 0.931 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
8. rorb ENSDARG00000033498 544 2.499 - - 0.751 0.778 - - - - 0.970 RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
9. si:ch211-237l4.6 ENSDARG00000056915 49 2.486 1.000 - 0.738 - 0.748 - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
10. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 2.478 - - 0.835 0.717 - - - - 0.926 moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
11. CU929052.1 CU929052.1 642 2.477 1.000 - - 0.702 0.775 - - - -
12. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 2.431 - - 0.785 0.880 - - - - 0.766 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
13. vsx2 ENSDARG00000005574 102 2.383 - - 0.759 0.802 - - - - 0.822 visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
14. fezf2 ENSDARG00000070677 224 2.375 - - 0.780 - 0.894 - - - 0.701 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
15. slc6a1a ENSDARG00000045944 260 2.182 - 0.711 - - 0.746 - - - 0.725 solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
16. lhfpl2b ENSDARG00000098153 132 1.941 1.000 0.941 - - - - - - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
17. foxg1a ENSDARG00000070769 928 1.851 - - - 0.919 0.932 - - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
18. nt5c1ba ENSDARG00000018153 31 1.812 1.000 - - - - - - - 0.812 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
19. cadm3 ENSDARG00000057013 1545 1.809 - - - - - - - 0.946 0.863 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
20. fstl5 ENSDARG00000040198 213 1.798 - - 0.892 - - - - 0.906 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
21. ift20 ENSDARG00000040556 285 1.793 - 0.892 - - - - - 0.901 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
22. si:dkeyp-104b3.18 ENSDARG00000101129 1 1.761 1.000 0.761 - - - - - - - si:dkeyp-104b3.18 [Source:ZFIN;Acc:ZDB-GENE-070912-624]
23. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1.761 1.000 0.761 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
24. lingo2 lingo2 67 1.74 1.000 - - - 0.740 - - - -
25. FP102191.1 FP102191.1 21 1.739 - 1.000 0.739 - - - - - -
26. foxn4 ENSDARG00000010591 2332 1.712 - - - - - - - 0.854 0.858 forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
27. tbr1b ENSDARG00000004712 248 1.709 - - 0.878 - 0.831 - - - - T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
28. eef1a1a ENSDARG00000039502 234 1.707 0.802 - - - - - - 0.905 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
29. ebf3 ebf3 4238 1.69 - - - 0.775 - - - 0.915 -
30. cep128 ENSDARG00000103771 75 1.668 - 0.904 - - - 0.764 - - - centrosomal protein 128 [Source:ZFIN;Acc:ZDB-GENE-070410-34]
31. foxg1b ENSDARG00000032705 354 1.66 - - - 0.802 - - - - 0.858 forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
32. BX957337.1 BX957337.1 1685 1.652 - - - 0.740 - - - 0.912 -
33. tubb5 ENSDARG00000037997 18691 1.649 - - - 0.730 - - - 0.919 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
34. NELL2A ENSDARG00000090690 840 1.646 - 0.761 - - - - - 0.885 - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
35. vamp2 ENSDARG00000056877 2158 1.644 - - - - - - - 0.918 0.726 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
36. pmelb ENSDARG00000033760 206 1.63 - - - - 0.812 - - - 0.818 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
37. six3b ENSDARG00000054879 2416 1.623 - - - 0.751 - - - - 0.872 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
38. ahr1b ENSDARG00000023537 44 1.615 - - - - 0.723 - - - 0.892 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
39. si:ch211-253p18.2 ENSDARG00000092770 21 1.615 0.854 0.761 - - - - - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
40. dlx1a ENSDARG00000013125 142 1.606 - - - - 0.853 - - - 0.753 distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
41. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.598 - - - 0.817 0.781 - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
42. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.598 - - 0.760 - 0.838 - - - -
43. si:ch211-161h7.5 ENSDARG00000093044 12 1.557 0.854 - - - - - - - 0.703 si:ch211-161h7.5 [Source:ZFIN;Acc:ZDB-GENE-091204-265]
44. nr2e1 ENSDARG00000017107 340 1.557 - - 0.744 - 0.813 - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
45. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1.554 - 0.761 - - - - - - 0.793 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
46. TMEM57 TMEM57 260 1.55 - - - 0.777 0.773 - - - -
47. crygmx ENSDARG00000053862 482 1.547 - - 0.706 0.841 - - - - - crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
48. lhx2b ENSDARG00000031222 517 1.543 - - - 0.736 0.807 - - - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
49. cps1 ENSDARG00000020028 67 1.542 - - - 0.762 0.780 - - - - carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
50. bcl11ba ENSDARG00000062510 169 1.535 - - 0.702 0.833 - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
51. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1.529 - - - 0.807 0.722 - - - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
52. piwil1 ENSDARG00000041699 21 1.527 - - 0.747 - 0.780 - - - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
53. CLDN22 CLDN22 114 1.525 - - - 0.774 - 0.751 - - -
54. pax6l pax6l 54 1.51 - - - 0.802 - - - - 0.708
55. si:ch211-152c2.3 ENSDARG00000045898 3448 1.51 - - - 0.773 0.737 - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
56. eomesa ENSDARG00000006640 257 1.499 - - 0.775 - 0.724 - - - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
57. irx6a ENSDARG00000034420 29 1.489 - 0.761 - - - - - - 0.728 iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]
58. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.473 - - - 0.729 - - - - 0.744 G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
59. abhd2b ENSDARG00000045804, ENSDARG00000115068 23 1.473 - - 0.766 0.707 - - - - - abhydrolase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061027-74]
60. crhbp ENSDARG00000024831 63 1.472 - 0.761 - 0.711 - - - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
61. lhx5 ENSDARG00000057936 785 1.468 - - 0.742 0.726 - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
62. aldh1a3 ENSDARG00000076933 95 1.451 - - 0.734 - 0.717 - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
63. amer2 ENSDARG00000075222 594 1.446 - - - 0.709 - - - - 0.737 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
64. lrrc23 ENSDARG00000006174 234 1.425 0.724 - - - - 0.701 - - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
65. slc7a9 ENSDARG00000005894 29 1 - - - - - 1.000 - - - solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
66. si:dkey-217f16.1 ENSDARG00000089602 17 1 1.000 - - - - - - - - si:dkey-217f16.1 [Source:ZFIN;Acc:ZDB-GENE-091116-95]
67. zfyve19 ENSDARG00000003642 12 1 - 1.000 - - - - - - - zinc finger, FYVE domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-040718-109]
68. CR392354.1 CR392354.1 20 1 1.000 - - - - - - - -
69. SLC4A5 9 1 - 1.000 - - - - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
70. mea1 ENSDARG00000039820 589 1 1.000 - - - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
71. BX511182.1 BX511182.1 8 1 - - - - - 1.000 - - -
72. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 1.000 - - - - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
73. CD200_1 CD200_1 1 1 1.000 - - - - - - - -
74. pdcd2 ENSDARG00000007892 223 1 1.000 - - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
75. mir22a-1 mir22a-1 192 1 1.000 - - - - - - - -
76. zgc:112437 ENSDARG00000009215 50 1 1.000 - - - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
77. CR854948.2 CR854948.2 4 1 1.000 - - - - - - - -
78. CAMK1 CAMK1 28 1 1.000 - - - - - - - -
79. CR383676.3_2 CR383676.3_2 9 1 1.000 - - - - - - - -
80. cthrc1b ENSDARG00000001971 44 1 1.000 - - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
81. wu:fe11b02_1 wu:fe11b02_1 7 1 1.000 - - - - - - - -
82. zgc:172270 ENSDARG00000003632, ENSDARG00000111414 58 1 1.000 - - - - - - - - zgc:172270 [Source:ZFIN;Acc:ZDB-GENE-080204-67]
83. si:ch73-7i4.1 ENSDARG00000094554 771 1 1.000 - - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
84. nfatc1 ENSDARG00000036168 16 1 1.000 - - - - - - - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
85. plac8l1 ENSDARG00000069031 161 1 - - - - - 1.000 - - - PLAC8-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-165]
86. U5_3 U5_3 3 1 1.000 - - - - - - - -
87. SYNGAP1_1 SYNGAP1_1 66 1 1.000 - - - - - - - -
88. si:dkey-111m11.1 si:dkey-111m11.1 1 1 1.000 - - - - - - - -
89. dctn1b ENSDARG00000056753 6 1 1.000 - - - - - - - - dynactin 1b [Source:ZFIN;Acc:ZDB-GENE-050419-28]
90. gdf7 ENSDARG00000042784 36 1 1.000 - - - - - - - - growth differentiation factor 7 [Source:ZFIN;Acc:ZDB-GENE-990714-1]
91. irak3 ENSDARG00000053131 16 1 1.000 - - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
92. VWDE_1 VWDE_1 2 1 1.000 - - - - - - - -
93. tmem184b tmem184b 2 1 1.000 - - - - - - - -
94. CR392001.1 ENSDARG00000095478 15 1 - 1.000 - - - - - - -
95. CD200_2 CD200_2 47 1 1.000 - - - - - - - -
96. man2a1 ENSDARG00000102200 12 1 1.000 - - - - - - - - mannosidase, alpha, class 2A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060526-31]
97. pxmp2 ENSDARG00000003144 50 1 1.000 - - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
98. NHSL1 NHSL1 182 1 1.000 - - - - - - - -
99. cd44a ENSDARG00000087863 4 1 1.000 - - - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
100. gpat2 ENSDARG00000053575 12 1 1.000 - - - - - - - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]

There are 941 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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