Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for paxip1

Gene Name Gene ID Reads Annotation
paxip1 ENSDARG00000005606 1417 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]










Genes with expression patterns similar to paxip1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. paxip1 ENSDARG00000005606 1417 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
2. pabpn1 ENSDARG00000045373 4876 2.811 - - 0.898 - - - - 0.963 0.950 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
3. mcts1 ENSDARG00000025972 4662 2.727 - - 0.935 - 0.945 - - - 0.847 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
4. gatad2ab ENSDARG00000006192 2461 2.721 - - - - 0.950 - - 0.967 0.804 GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
5. pdzrn3b ENSDARG00000073869 1566 2.714 - - 0.980 - - - 0.813 - 0.921 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
6. samm50l ENSDARG00000039681 2465 2.658 0.791 - 0.967 - - - - - 0.900 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
7. araf ENSDARG00000054533 1132 2.606 - 0.701 - - - - - 0.992 0.913 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
8. aldh16a1 ENSDARG00000037935 617 2.603 - - - - 0.975 0.701 - - 0.927 aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
9. cbfa2t2 ENSDARG00000074337 4323 2.599 - 0.725 0.969 - 0.905 - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
10. tsn ENSDARG00000041830, ENSDARG00000111147 1268 2.523 - - - 0.720 - - 0.814 0.989 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
11. cpsf3 ENSDARG00000027649 6897 2.403 - - 0.827 - - - 0.711 0.865 - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
12. ppp6r3 ENSDARG00000013379 2912 2.389 - 0.709 0.970 - 0.710 - - - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
13. ankhd1 ENSDARG00000077860 5510 2.319 - - - - - - 0.703 0.722 0.894 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
14. lgi1a ENSDARG00000020493 1218 1.966 - - 0.987 - 0.979 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
15. fut8 fut8 652 1.964 - - 0.987 - 0.977 - - - -
16. yy1b ENSDARG00000027978 2669 1.961 - - 0.975 - - - - 0.986 - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
17. casc5 1487 1.955 - - - - 0.984 - - 0.971 - cancer susceptibility candidate 5, transcript variant X3
18. rhogc ENSDARG00000028401 2671 1.95 - - 0.984 - 0.966 - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
19. CR548630.1 CR548630.1 3301 1.942 - - 0.969 - 0.973 - - - -
20. znf292a ENSDARG00000016763 2253 1.934 - - 0.970 - - - - 0.964 - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
21. cenpf ENSDARG00000055133 5267 1.929 - - 0.979 - 0.950 - - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
22. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.917 - - 0.948 - 0.969 - - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
23. phc2b_1 ENSDARG00000013224 1316 1.909 - - 0.987 - - - - - 0.922 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
24. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.907 - - 0.979 - - - - - 0.928 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
25. dopey1 438 1.902 - - - - 0.978 - - - 0.924 dopey family member 1, transcript variant X4
26. nploc4 ENSDARG00000100487 1262 1.9 - - 0.985 - - - - - 0.915 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
27. olig2 ENSDARG00000040946 1405 1.894 - - 0.973 - - - - - 0.921 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
28. atp5g3a 9539 1.891 - - 0.958 - 0.933 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9), genome duplicate a
29. arid1b ENSDARG00000092503 1376 1.891 - - 0.990 - - - - - 0.901 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
30. st8sia2 ENSDARG00000018788 2183 1.881 - - - - - - - 0.951 0.930 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
31. MAN2A2 ENSDARG00000063101 922 1.88 - - - - - - - 0.961 0.919 mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
32. pcnp ENSDARG00000037713 2754 1.88 - - 0.909 - - - - 0.971 - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
33. pank1b ENSDARG00000010098 3202 1.874 - - 0.984 - 0.890 - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
34. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.87 - - - - 0.968 - - - 0.902 target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
35. pld1b ENSDARG00000057125 325 1.866 0.881 - 0.985 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
36. eif4e3 ENSDARG00000005078 1624 1.866 - - 0.977 - - - - - 0.889 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
37. gdi1 ENSDARG00000056122 4106 1.859 - - 0.969 - - - - - 0.890 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
38. slc1a5 ENSDARG00000099186 7580 1.858 - - 0.917 - - - - 0.941 - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
39. ell ENSDARG00000000568 1404 1.848 - - - - - - - 0.972 0.876 elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
40. dvl3a ENSDARG00000015707 1132 1.845 - - - - 0.980 - - - 0.865 dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
41. pes ENSDARG00000018902 3286 1.84 - - - - - - - 0.959 0.881 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
42. ube2v1 ENSDARG00000041875 5739 1.835 - - 0.921 - 0.914 - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
43. smurf1 ENSDARG00000016086 878 1.834 - - - - 0.976 - - - 0.858 SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
44. atp6v1h ENSDARG00000006370 7028 1.831 - - 0.897 - - - - 0.934 - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
45. si:dkey-238o14.5 si:dkey-238o14.5 450 1.827 0.834 - - - - - - 0.993 -
46. qki2 ENSDARG00000010018 2230 1.827 - 0.844 0.983 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
47. cables2a ENSDARG00000076964 1330 1.823 - - - - 0.967 - - - 0.856 Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
48. tmem248 ENSDARG00000018825 1560 1.815 - - 0.986 - - - - - 0.829 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
49. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.814 - - - - 0.966 - - - 0.848 WD repeat domain 44 [Source:NCBI gene;Acc:569045]
50. myo9b ENSDARG00000077410 1956 1.811 0.824 - - - - - - 0.987 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
51. RAB39B RAB39B 482 1.81 0.827 - 0.983 - - - - - -
52. kifc1 ENSDARG00000001558 6658 1.806 - - 0.876 - - - - - 0.930 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
53. SRGAP3 ENSDARG00000060309 5353 1.802 - - - - 0.958 - - 0.844 - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
54. flot2a ENSDARG00000004830 5276 1.797 - - 0.974 - - - - 0.823 - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
55. ranbp9 ENSDARG00000061048 2687 1.792 - - 0.965 - - - - - 0.827 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
56. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.79 - - 0.954 - - - - - 0.836 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
57. DLC1 ENSDARG00000079317 2149 1.786 - - - - 0.938 - - - 0.848 DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
58. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.781 - - - - 0.928 - - - 0.853 translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
59. supt6h ENSDARG00000006524 3221 1.779 - - - - 0.968 - - - 0.811 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
60. shmt1 ENSDARG00000052816 5463 1.773 - - - - 0.847 - - 0.926 - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
61. zgc:123105 ENSDARG00000003127 3061 1.77 - - - - 0.967 - 0.803 - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
62. vasna ENSDARG00000099266, ENSDARG00000111629 488 1.765 0.788 - - - - - - 0.977 - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
63. tom1 ENSDARG00000104581 1457 1.762 - - - - - - - 0.956 0.806 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
64. cnot3a ENSDARG00000007135 3084 1.76 - - 0.890 - - - - - 0.870 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
65. smo ENSDARG00000002952 6411 1.739 - - - - 0.966 - 0.773 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
66. CABZ01081490.1 ENSDARG00000111653 11892 1.738 - - - - 0.921 - - 0.817 -
67. rrbp1a ENSDARG00000013763 4723 1.738 - - 0.890 - - - - 0.848 - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
68. supt16h ENSDARG00000079949 4755 1.73 - - - - - - 0.795 - 0.935 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
69. mars ENSDARG00000034396 3618 1.727 - - - - 0.868 - - - 0.859 methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
70. LPHN2 LPHN2 1971 1.727 - 0.747 0.980 - - - - - -
71. nktr ENSDARG00000059097 1998 1.72 - 0.737 0.983 - - - - - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
72. CABZ01087568.1 CABZ01087568.1 1487 1.713 - - - - - - 0.828 - 0.885
73. ZBTB16 ZBTB16 3385 1.712 - - 0.949 - - - - - 0.763
74. ebna1bp2 ENSDARG00000054980 4621 1.711 - - - - 0.923 - - 0.788 - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
75. atp1a1a.1 ENSDARG00000002791 7392 1.707 - - 0.924 - - - - 0.783 - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-001212-1]
76. capn2b ENSDARG00000055592 5431 1.703 - - - - 0.906 - - 0.797 - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
77. calm1a ENSDARG00000021811 4791 1.703 - - - - 0.864 - - 0.839 - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
78. usp1 ENSDARG00000056414 1816 1.702 - - 0.728 - - - - 0.974 - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
79. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.699 - - - 0.708 - - - 0.991 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
80. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 1.698 - - 0.984 - - - 0.714 - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
81. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.698 - - - - - - - 0.870 0.828 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
82. clybl ENSDARG00000029729 690 1.698 0.711 - 0.987 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
83. cnp ENSDARG00000070822 649 1.698 - - - - - 0.706 - 0.992 - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
84. UNKL ENSDARG00000037838 1086 1.697 0.750 - - - 0.947 - - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
85. vps4b ENSDARG00000069175 1922 1.693 - - - - - 0.707 - 0.986 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
86. yipf2 ENSDARG00000021399 702 1.687 - 0.769 - - - - - - 0.918 Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
87. ldb1a ENSDARG00000010137 3035 1.687 0.716 - 0.971 - - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
88. 5S_rRNA_21 5S_rRNA_21 1323 1.686 - 0.806 - - - - - - 0.880
89. nckap1 ENSDARG00000060853 3540 1.679 - - - - 0.959 - - - 0.720 NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
90. ctnnbip1 ENSDARG00000038954 2519 1.677 - - 0.973 - - - - - 0.704 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
91. csnk1g2a ENSDARG00000005458 2917 1.675 - 0.715 - - 0.960 - - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
92. dpp9 ENSDARG00000052606 2279 1.672 - - - - 0.955 0.717 - - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
93. dhdds ENSDARG00000039851 1135 1.671 - - - - - 0.783 - - 0.888 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
94. slc7a6os ENSDARG00000010596 1599 1.671 - - - - - - 0.709 0.962 - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
95. dbx1a ENSDARG00000086393 3161 1.67 - - 0.962 - 0.708 - - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
96. cebpb ENSDARG00000042725 3921 1.67 - 0.714 - - - - - 0.956 - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
97. pygo2 ENSDARG00000036772 2510 1.665 - - - 0.758 0.907 - - - - pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
98. zfyve9a ENSDARG00000101903 437 1.664 0.751 - - - - - - - 0.913 zinc finger, FYVE domain containing 9a [Source:ZFIN;Acc:ZDB-GENE-070705-182]
99. fen1 ENSDARG00000011404 3358 1.664 - - - - 0.942 - 0.722 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
100. cd99l2 ENSDARG00000056722 5036 1.663 - - 0.875 - - - - - 0.788 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]

There are 1697 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA