Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nkx2.2b

Gene Name Gene ID Reads Annotation
nkx2.2b ENSDARG00000101549 266 NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]










Genes with expression patterns similar to nkx2.2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx2.2b ENSDARG00000101549 266 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
2. nkx2.2a ENSDARG00000053298 747 3.541 0.832 - - 0.876 - 0.956 0.877 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
3. si:ch73-265d7.2 ENSDARG00000116713 2142 2.616 0.821 - - - - 0.916 0.879 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
4. pkd2l1 ENSDARG00000022503 372 2.605 0.813 - - - - 0.941 0.851 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
5. zgc:113531 ENSDARG00000038794 2063 2.581 0.861 - - - - 0.848 0.872 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
6. nkx6.1 ENSDARG00000022569 3779 2.578 0.810 - - - - 0.943 0.825 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
7. ADAMTS3 ENSDARG00000060127 2839 2.507 0.874 - - - - 0.902 0.731 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
8. nkx6.2 ENSDARG00000104735 5081 2.448 0.851 - - - - 0.886 0.711 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
9. nkx2.9 ENSDARG00000020332 357 2.395 0.958 - - - - 0.733 0.704 - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
10. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 2.393 0.733 - - - - 0.844 0.816 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
11. mnx2a ENSDARG00000042106 939 2.392 0.793 - - - - 0.828 0.771 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
12. epha4a ENSDARG00000054454 1501 2.387 0.749 0.829 - - - 0.809 - - - eph receptor A4a [Source:ZFIN;Acc:ZDB-GENE-001207-7]
13. olig2 ENSDARG00000040946 1405 2.358 0.798 - - - - 0.859 0.701 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
14. gfra3 ENSDARG00000087704 122 2.304 0.704 - - - - 0.814 0.786 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
15. zgc:66472 ENSDARG00000075916 635 2.301 - 0.857 - - - 0.707 0.737 - - zgc:66472 [Source:ZFIN;Acc:ZDB-GENE-030131-5705]
16. SSX2IP SSX2IP 316 2.298 0.759 - - - - 0.741 0.798 - -
17. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 2.279 - 0.815 - - - 0.730 0.734 - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
18. bicc2 ENSDARG00000076557 77 2.237 0.725 - - - - 0.729 0.783 - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
19. scg2a 800 2.203 0.701 - - - - 0.715 0.787 - - secretogranin II (chromogranin C) a
20. BX511121.1 ENSDARG00000029997 1774 2.184 0.740 - - - - 0.702 0.742 - -
21. spon1a ENSDARG00000010029 355 1.812 - - - - - 0.829 0.983 - - spondin 1a [Source:ZFIN;Acc:ZDB-GENE-000427-9]
22. si:dkey-192i18.3 si:dkey-192i18.3 47 1.803 - 0.972 - - - 0.831 - - -
23. gpr98 gpr98 717 1.758 - - - - - 0.899 0.859 - -
24. cyr61l2 ENSDARG00000099985 725 1.746 - - - - - 0.823 0.923 - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
25. im:7162084 im:7162084 665 1.711 0.939 - - - - 0.772 - - -
26. pkd1b ENSDARG00000033029 461 1.708 - - - - - 0.897 0.811 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
27. fabp7a ENSDARG00000007697 5211 1.706 - - - - - 0.842 0.864 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
28. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.681 0.795 - - - - - 0.886 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
29. lin7b ENSDARG00000037932 150 1.678 - - - - - 0.860 0.818 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
30. neurod neurod 1189 1.661 - - - - - 0.819 0.842 - -
31. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.655 0.815 - - - - - 0.840 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
32. chrm3a ENSDARG00000071091 72 1.643 - - - - - 0.791 0.852 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
33. foxa2 ENSDARG00000003411 2309 1.638 - - - - - 0.825 0.813 - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
34. cadpsa ENSDARG00000043661 160 1.635 0.744 - - - - 0.891 - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
35. hectd2 ENSDARG00000061194 559 1.63 - - - - - 0.792 0.838 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
36. hnrnpa3 ENSDARG00000059351 453 1.628 - - - - - 0.885 0.743 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
37. mtnr1aa ENSDARG00000037545, ENSDARG00000114868 40 1.623 0.808 - - - - - 0.815 - - melatonin receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-990415-155]
38. cdkl1 ENSDARG00000017329 3345 1.62 0.780 - - - - - 0.840 - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
39. wnt4a ENSDARG00000071208 1157 1.614 - - - - - 0.762 0.852 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
40. bcr ENSDARG00000079286 578 1.612 0.786 - - - - - 0.826 - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
41. mapre3a ENSDARG00000020231 100 1.607 - - - - - 0.862 0.745 - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
42. VWA7 ENSDARG00000061462 816 1.602 0.739 - - - - - 0.863 - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
43. C2CD4A ENSDARG00000061416 61 1.601 - - - - - 0.735 0.866 - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
44. crb1 ENSDARG00000100506, ENSDARG00000110621 373 1.586 0.847 - - - - 0.739 - - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
45. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.583 0.725 - - - - - 0.858 - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
46. urp2 ENSDARG00000067781 85 1.582 - - - - - 0.866 0.716 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
47. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.58 - - - - - 0.791 0.789 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
48. dlg4 88 1.579 - - - - - 0.789 0.790 - - discs large MAGUK scaffold protein 4, transcript variant X5
49. gria2b ENSDARG00000052765 188 1.578 - - - - - 0.733 0.845 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
50. calca ENSDARG00000056590 150 1.577 0.833 - - - - 0.744 - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
51. uggt2 ENSDARG00000062089 661 1.577 - 0.804 - - - 0.773 - - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050517-21]
52. sst3 61 1.565 - - - - - 0.767 0.798 - - somatostatin 3
53. tmem240 tmem240 180 1.564 - - - - - 0.795 0.769 - -
54. slit1a ENSDARG00000044954 3810 1.559 - - - - - 0.741 0.818 - - slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
55. insm1a ENSDARG00000091756 1838 1.552 0.770 - - - - - 0.782 - - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
56. creb1b ENSDARG00000093420 524 1.55 - 0.835 - - - - 0.715 - - cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]
57. her12 ENSDARG00000032963 754 1.549 - 0.835 - - - - 0.714 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
58. clu ENSDARG00000010434 498 1.548 0.778 - - - - - 0.770 - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
59. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 1.547 - - - - - 0.807 0.740 - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
60. zgc:113397 zgc:113397 60 1.546 0.744 - - - - - 0.802 - -
61. mnx2b ENSDARG00000030350 484 1.546 0.704 - - - - - 0.842 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
62. CU928222.1 ENSDARG00000097436 1662 1.545 - - - - - 0.781 0.764 - -
63. zgc:110434 21 1.542 0.744 - - - - - 0.798 - - zgc:110434
64. wbscr27 wbscr27 70 1.542 0.744 - - - - - 0.798 - -
65. zgc:92275 ENSDARG00000034048 9 1.542 0.744 - - - - - 0.798 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
66. CCDC74B CCDC74B 8 1.542 0.744 - - - - - 0.798 - -
67. tmem179b ENSDARG00000069495 17 1.542 0.744 - - - - - 0.798 - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
68. CCDC89 CCDC89 40 1.54 - - - 0.782 - - 0.758 - -
69. PRIMA1 PRIMA1 459 1.539 0.780 - - - - - 0.759 - -
70. cdk20 ENSDARG00000003867 27 1.537 - - - 0.739 - - 0.798 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
71. AL954698.2 ENSDARG00000102132 28 1.532 - - - - - - 0.798 0.734 -
72. CABZ01029738.1 CABZ01029738.1 327 1.529 - - - - - 0.763 0.766 - -
73. efna3a ENSDARG00000014675 68 1.527 - - - - - 0.788 0.739 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
74. nptnb ENSDARG00000043864 165 1.522 - - - - - 0.738 0.784 - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
75. pdzrn4 ENSDARG00000045687 362 1.515 0.761 - - - - - 0.754 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
76. foxb1a ENSDARG00000089042 101 1.515 0.754 - - - - - 0.761 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
77. GJD2_1 GJD2_1 3045 1.507 - - - - - 0.762 0.745 - -
78. si:dkey-253d23.9 ENSDARG00000074820 24 1.502 0.744 - - - - - 0.758 - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
79. tmem136a ENSDARG00000024920 535 1.498 - - - - - 0.749 0.749 - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
80. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.497 - - - - - 0.754 0.743 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
81. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.493 - - - - - 0.793 0.700 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
82. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1.482 - - - 0.754 - - - 0.728 - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
83. cxxc4 ENSDARG00000077817 197 1.481 0.744 - - - - - 0.737 - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
84. si:dkey-169l5.3 si:dkey-169l5.3 239 1.478 - - - - - 0.774 0.704 - -
85. chat chat 463 1.471 0.736 - - - - - 0.735 - -
86. CABZ01087549.1 CABZ01087549.1 108 1.458 0.744 - - - - 0.714 - - -
87. gpc5 gpc5 184 1.451 - - - - - 0.738 0.713 - -
88. nes ENSDARG00000088805 2710 1.448 - - - - - 0.711 0.737 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
89. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.443 0.702 - - - - - 0.741 - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
90. nbeaa ENSDARG00000070080 862 1.44 - - - 0.716 - - - 0.724 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
91. slc6a1a ENSDARG00000045944 260 1.425 - - - 0.707 - 0.718 - - - solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
92. ddrgk1_1 ENSDARG00000037172 1563 0.987 - 0.987 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
93. zgc:171779 ENSDARG00000016908 26 0.985 - 0.985 - - - - - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
94. CR354432.1 CR354432.1 424 0.983 - 0.983 - - - - - - -
95. si:ch211-236p5.2 ENSDARG00000086256 8 0.982 - 0.982 - - - - - - - si:ch211-236p5.2 [Source:ZFIN;Acc:ZDB-GENE-081028-33]
96. si:ch211-255g12.8 ENSDARG00000069627 22 0.982 - 0.982 - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
97. sfmbt2 ENSDARG00000045519 251 0.981 - 0.981 - - - - - - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
98. itsn1 ENSDARG00000000086 684 0.98 - 0.980 - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
99. cry1b cry1b 152 0.979 - 0.979 - - - - - - -
100. plekha7a ENSDARG00000060813 179 0.979 - 0.979 - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]

There are 1354 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA