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Results for mri1

Gene Name Gene ID Reads Annotation
mri1 ENSDARG00000075754 2567 methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]










Genes with expression patterns similar to mri1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mri1 ENSDARG00000075754 2567 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
2. ppp2r2d ENSDARG00000102009 5710 2.546 - - 0.916 - - 0.714 - - 0.916 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
3. tm2d3 ENSDARG00000076618 2310 2.21 - 0.736 - - - - 0.726 - 0.748 TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
4. EEF1E1 ENSDARG00000071774 3806 1.923 - - 0.956 - - - - - 0.967 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
5. nap1l4b ENSDARG00000068868 3285 1.901 - - 0.949 - - - - - 0.952 nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
6. nol10 ENSDARG00000020077 984 1.9 - - 0.944 - - - - - 0.956 nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
7. srebf2 ENSDARG00000063438 1982 1.849 - - 0.949 - - - - - 0.900 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
8. hes6 ENSDARG00000019335 4754 1.832 - - 0.953 - - - - - 0.879 hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
9. wtip ENSDARG00000103607 797 1.832 - - 0.943 - - 0.889 - - - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
10. eprs ENSDARG00000060494 4729 1.816 - - 0.873 - - - - - 0.943 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
11. kpna4 ENSDARG00000023190 2505 1.801 - 0.841 - - - - - - 0.960 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
12. hnrnpk ENSDARG00000018914 8841 1.799 - - 0.835 - - - - - 0.964 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
13. BRK1 ENSDARG00000041974 6430 1.78 - - 0.879 - - - - - 0.901 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
14. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.775 - - 0.906 - - - - - 0.869 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
15. C6H2orf40 C6H2orf40 4224 1.772 - 0.830 0.942 - - - - - -
16. med21 ENSDARG00000026839 1083 1.756 - - 0.950 - - - 0.806 - - mediator complex subunit 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2763]
17. mccc2 ENSDARG00000017571 5635 1.754 - - 0.925 - - - - - 0.829 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
18. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 1.751 - 0.795 - - - - - - 0.956 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
19. TUBB8P7_1 TUBB8P7_1 2722 1.748 - - 0.946 - - - - - 0.802
20. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.746 0.833 - - - - - - - 0.913 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
21. zgc:100918 ENSDARG00000087243 5451 1.735 - - 0.833 - - - - - 0.902 zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
22. CCDC71 CCDC71 2442 1.729 - - - - - - 0.757 - 0.972
23. ccdc22 ENSDARG00000052379 2276 1.729 - 0.773 - - - - - - 0.956 coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
24. cyfip1 ENSDARG00000044345 5483 1.728 - - 0.874 - - - - - 0.854 cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
25. magi1b ENSDARG00000003169 2056 1.721 - - - - - - - 0.754 0.967 membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
26. nlk1 ENSDARG00000006566 1123 1.719 - - 0.954 - - 0.765 - - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
27. bcat2 ENSDARG00000054849 4317 1.713 - 0.817 0.896 - - - - - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
28. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 1.706 - - - - - - 0.753 - 0.953 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
29. mgaa ENSDARG00000078784 1344 1.706 - - 0.972 - - - 0.734 - - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
30. phf3 ENSDARG00000034768 1372 1.69 - 0.725 0.965 - - - - - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
31. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.687 - 0.733 - - - - - - 0.954 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
32. nes ENSDARG00000088805 2710 1.683 - - 0.945 - 0.738 - - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
33. gpm6bb ENSDARG00000001676 2005 1.68 - - 0.936 - - 0.744 - - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
34. luc7l ENSDARG00000055903 3357 1.68 - - 0.925 - - 0.755 - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
35. pou2f1b ENSDARG00000007996 2172 1.68 - - - - - 0.717 - - 0.963 POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
36. sltm ENSDARG00000052728 6234 1.678 - - 0.966 - - - 0.712 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
37. ssbp4 ENSDARG00000056483 10196 1.676 - - 0.917 - - 0.759 - - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
38. syt4 ENSDARG00000036505 421 1.664 - - - - - 0.713 - - 0.951 synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
39. yaf2 ENSDARG00000015966 1905 1.663 - 0.717 0.946 - - - - - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
40. cyp7c1 cyp7c1 1214 1.641 0.712 - 0.929 - - - - - -
41. rnf10 ENSDARG00000079687 6768 1.637 - - 0.927 - - - 0.710 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
42. zgc:171775 ENSDARG00000058381, ENSDARG00000114470 5760 1.636 - 0.769 - - - - - - 0.867 zgc:171775 [Source:ZFIN;Acc:ZDB-GENE-030131-4309]
43. sdc4 ENSDARG00000059906 10105 1.631 - - 0.916 - - - - - 0.715 syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
44. nusap1 ENSDARG00000002403 6953 1.617 - - 0.866 - - - 0.751 - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
45. ttk ENSDARG00000041361 3911 1.617 - - 0.865 - - - - 0.752 - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
46. psmd11b ENSDARG00000005134 4242 1.603 - 0.769 0.834 - - - - - - proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
47. lepre1 lepre1 5346 1.589 - 0.726 - - - - - - 0.863
48. atf4b1 atf4b1 17316 1.586 - - 0.860 - - - - - 0.726
49. psmd13 ENSDARG00000016239 4229 1.575 - - 0.808 - - - - 0.767 - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
50. shfm1 7620 1.575 - 0.743 0.832 - - - - - - split hand/foot malformation (ectrodactyly) type 1
51. si:ch73-110p20.1 5932 1.563 - - 0.836 - - - - - 0.727 si:ch73-110p20.1
52. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 1.556 0.716 - 0.840 - - - - - - adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
53. CDCA2 CDCA2 930 1.541 - - - - - 0.777 0.764 - -
54. tmem198a ENSDARG00000042115 1694 1.54 - - - 0.769 - 0.771 - - - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
55. prcc ENSDARG00000063252 2065 1.538 - 0.777 - - - 0.761 - - - proline rich mitotic checkpoint control factor [Source:ZFIN;Acc:ZDB-GENE-070717-1]
56. anp32e ENSDARG00000054804 11017 1.537 - 0.734 0.803 - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
57. atp2b4 5891 1.535 - - 0.823 - - 0.712 - - - ATPase, Ca++ transporting, plasma membrane 4
58. nrbp2 nrbp2 1651 1.509 0.728 0.781 - - - - - - -
59. smarca4 smarca4 9726 1.509 - - 0.805 - - 0.704 - - -
60. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.505 - - - - - 0.735 - - 0.770 structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
61. tox3 ENSDARG00000073957 3075 1.505 - - - - 0.736 0.769 - - - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
62. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.501 - - - - - 0.705 0.796 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
63. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 1.501 - 0.760 - - - 0.741 - - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
64. C24H7orf50 1417 1.5 - - - 0.719 - - - 0.781 - chromosome 24 C7orf50 homolog, transcript variant X2
65. ormdl2 ENSDARG00000058022 1146 1.491 - 0.704 - - - - 0.787 - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
66. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.488 - 0.709 - - - - 0.779 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
67. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.484 - - - - - 0.704 - 0.780 - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
68. nefmb ENSDARG00000043697 2052 1.474 - - - - - 0.733 0.741 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
69. NIPBL NIPBL 871 1.463 - 0.736 - - - 0.727 - - -
70. ash1l ENSDARG00000070981 2520 1.456 - - - - - 0.719 0.737 - - ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
71. UBE2S ENSDARG00000031775, ENSDARG00000114827 1890 1.454 - - - - - - 0.712 0.742 - ubiquitin-conjugating enzyme E2S [Source:ZFIN;Acc:ZDB-GENE-050913-92]
72. dync1i1 ENSDARG00000060948 554 1.452 - - - 0.726 - 0.726 - - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
73. smarcd1 ENSDARG00000019004 6028 1.44 - - - - - 0.738 0.702 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
74. CABZ01038493.1 ENSDARG00000117625 983 1.429 - - - 0.720 - - - 0.709 -
75. brms1 ENSDARG00000051955 900 1.423 - - - - - 0.715 0.708 - - BRMS1, transcriptional repressor and anoikis regulator [Source:ZFIN;Acc:ZDB-GENE-030616-596]
76. PLEKHG1 2100 1.412 - - 0.704 0.708 - - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
77. nr2f2 ENSDARG00000040926 5213 0.978 - - - - - - - - 0.978 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
78. rcor2 ENSDARG00000008278 1678 0.974 - - - - - - - - 0.974 REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
79. ppig ENSDARG00000044431 3427 0.973 - - - - - - - - 0.973 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
80. pou3f3a ENSDARG00000042032 2835 0.972 - - 0.972 - - - - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
81. tmpoa ENSDARG00000007315 3638 0.97 - - - - - - - - 0.970 thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
82. RSF1_2 RSF1_2 1343 0.97 - - 0.970 - - - - - -
83. cbl ENSDARG00000009958 1321 0.969 - - - - - - - - 0.969 Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
84. MDC1 ENSDARG00000086764 1851 0.969 - - 0.969 - - - - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
85. GIGYF1_1 GIGYF1_1 1865 0.969 - - 0.969 - - - - - -
86. dnajc5aa ENSDARG00000042948 2885 0.968 - - 0.968 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
87. bcl9 ENSDARG00000036687 1124 0.968 - - - - - - - - 0.968 B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
88. axin2 ENSDARG00000100149 4223 0.967 - - 0.967 - - - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
89. dpp3 ENSDARG00000020676 2393 0.967 - - - - - - - - 0.967 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
90. notch1a ENSDARG00000103554 498 0.967 - - 0.967 - - - - - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
91. ek1 ENSDARG00000020080 742 0.967 - - 0.967 - - - - - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
92. KANSL1_1 KANSL1_1 1809 0.967 - - - - - - - - 0.967
93. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.966 - - - - - - - - 0.966 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
94. nup188 ENSDARG00000030022 2398 0.965 - - - - - - - - 0.965 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
95. tfdp1b ENSDARG00000016304 3071 0.965 - - - - - - - - 0.965 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
96. otub1a ENSDARG00000055536 2892 0.964 - - - - - - - - 0.964 OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
97. ttc3 ENSDARG00000086075 2157 0.964 - - 0.964 - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
98. TRIO TRIO 1601 0.964 - - - - - - - - 0.964
99. ncl1 2835 0.964 - - - - - - - - 0.964 nicalin, transcript variant X3
100. si:ch211-10d23.5 ENSDARG00000095510 2632 0.964 - - - - - - - - 0.964 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]

There are 1127 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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