Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for kpna4

Gene Name Gene ID Reads Annotation
kpna4 ENSDARG00000023190 2505 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]










Genes with expression patterns similar to kpna4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. kpna4 ENSDARG00000023190 2505 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
2. tm2d3 ENSDARG00000076618 2310 2.274 - - - - 0.797 0.718 - - 0.759 TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
3. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.82 - - - - 0.843 - - - 0.977 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
4. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 1.809 - 0.832 - - - - - - 0.977 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
5. mri1 ENSDARG00000075754 2567 1.801 - 0.841 - - - - - - 0.960 methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
6. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.779 - - - - 0.805 - - - 0.974 SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
7. pi4k2b ENSDARG00000013881 1337 1.771 - - - - 0.798 - - - 0.973 phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
8. wasf3 wasf3 3287 1.762 - - - - 0.799 - - - 0.963
9. nup188 ENSDARG00000030022 2398 1.759 - - - - 0.779 - - - 0.980 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
10. ppig ENSDARG00000044431 3427 1.727 - - - - 0.751 - - - 0.976 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
11. necap2 ENSDARG00000046002 4372 1.706 - - - - 0.752 - - - 0.954 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
12. cbl ENSDARG00000009958 1321 1.705 - - - - - - 0.724 - 0.981 Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
13. sra1 ENSDARG00000053619 2799 1.699 - - - - 0.742 - - - 0.957 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
14. hnrnpk ENSDARG00000018914 8841 1.691 - - - - - - 0.745 - 0.946 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
15. otub1a ENSDARG00000055536 2892 1.691 - - - - - 0.707 - - 0.984 OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
16. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.675 - 0.735 - - - - - - 0.940 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
17. eif4ebp3l ENSDARG00000041607 5257 1.673 - 0.739 - - - - - - 0.934 eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
18. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.662 - - - - 0.751 - - - 0.911 Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
19. ptpn13 ENSDARG00000103699 2866 1.648 - - - - - - 0.709 - 0.939 protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
20. apc ENSDARG00000058868 2605 1.641 - - - 0.707 - - - - 0.934 adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
21. lepre1 lepre1 5346 1.634 - 0.750 - - - - - - 0.884
22. snrpe ENSDARG00000033175 7462 1.633 0.753 - - - - - - - 0.880 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
23. DTX4 ENSDARG00000076302 2642 1.631 - - - - 0.838 - - - 0.793 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
24. col4a6 ENSDARG00000052061 8636 1.615 - 0.849 - - - - 0.766 - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
25. pdcd4a ENSDARG00000021702 7293 1.614 - 0.709 - - - - - - 0.905 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
26. mccc2 ENSDARG00000017571 5635 1.611 - - - - - - 0.775 - 0.836 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
27. CU915738.1 CU915738.1 3723 1.574 - - - - 0.770 - - - 0.804
28. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 1.574 - - - 0.718 - - - - 0.856 cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
29. amotl2a ENSDARG00000061923 4713 1.574 - - - - 0.843 - 0.731 - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
30. kdm5c ENSDARG00000006124 4389 1.565 - - - - 0.829 - 0.736 - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
31. mrpl32 ENSDARG00000060489 2728 1.564 - 0.785 - - - - - 0.779 - mitochondrial ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060825-188]
32. serpinh1a ENSDARG00000075954 6488 1.564 - - - - - - 0.835 - 0.729 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
33. stau2 ENSDARG00000026801, ENSDARG00000112268 5161 1.548 - 0.848 - - - - 0.700 - - staufen double-stranded RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-687]
34. fkbp4 ENSDARG00000008447 3736 1.547 - - - - 0.729 - 0.818 - - FK506 binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-514]
35. prmt1 ENSDARG00000010246 11311 1.527 0.738 - - - - - - - 0.789 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
36. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.52 - 0.812 - - - - 0.708 - - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
37. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.518 - - - - 0.704 - - - 0.814 glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
38. zfand3 ENSDARG00000052833 2682 1.516 - - - - 0.813 - 0.703 - - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
39. aspm ENSDARG00000103754 5708 1.505 - - - - - 0.708 - - 0.797 abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
40. aco1 ENSDARG00000026376 5034 1.503 - 0.725 - - 0.778 - - - - aconitase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-031118-76]
41. cers2b ENSDARG00000058992 5319 1.499 - 0.779 - - 0.720 - - - - ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]
42. huwe1 ENSDARG00000016782 6493 1.483 - 0.749 - - 0.734 - - - - HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
43. mycbp ENSDARG00000091001 1511 1.472 - - - - 0.730 0.742 - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
44. rpa3 ENSDARG00000002613 2923 1.465 - 0.756 - - 0.709 - - - - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
45. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.463 0.716 - - - - - - 0.747 - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
46. psmd11b ENSDARG00000005134 4242 1.461 - 0.759 - - - - 0.702 - - proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
47. anp32e ENSDARG00000054804 11017 1.461 0.753 0.708 - - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
48. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.459 - 0.734 - - - 0.725 - - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
49. smo ENSDARG00000002952 6411 1.453 - - - - - - 0.711 0.742 - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
50. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.45 - - - - - 0.713 - - 0.737 ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
51. tyms ENSDARG00000042894 3068 1.448 0.728 - - - - 0.720 - - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
52. snrpd1 ENSDARG00000011648 8615 1.437 - 0.725 - - 0.712 - - - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
53. KANSL1_1 KANSL1_1 1809 0.983 - - - - - - - - 0.983
54. ddx21 ENSDARG00000063626 6695 0.982 - - - - - - - - 0.982 DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
55. atf6 ENSDARG00000012656 3873 0.982 - - - - - - - - 0.982 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
56. KIF2A ENSDARG00000043571 1560 0.98 - - - - - - - - 0.980 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
57. smad2 ENSDARG00000006389 646 0.98 - - - - - - - - 0.980 SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
58. homer3 homer3 1974 0.98 - - - - - - - - 0.980
59. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 0.978 - - - - - - - - 0.978 zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
60. EEF1E1 ENSDARG00000071774 3806 0.978 - - - - - - - - 0.978 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
61. tmem163a ENSDARG00000079858, ENSDARG00000116870 677 0.978 - - - - - - - - 0.978 transmembrane protein 163a [Source:ZFIN;Acc:ZDB-GENE-081104-429]
62. GPR108 ENSDARG00000096651 1734 0.977 - - - - - - - - 0.977 G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
63. magi1b ENSDARG00000003169 2056 0.977 - - - - - - - - 0.977 membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
64. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 0.977 - - - - - - - - 0.977 RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
65. rabif ENSDARG00000002690, ENSDARG00000114340 891 0.977 - - - - - - - - 0.977 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
66. pou2f1b ENSDARG00000007996 2172 0.977 - - - - - - - - 0.977 POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
67. bcl9 ENSDARG00000036687 1124 0.977 - - - - - - - - 0.977 B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
68. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 0.977 - - - - - - - - 0.977 erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
69. nr2f2 ENSDARG00000040926 5213 0.976 - - - - - - - - 0.976 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
70. syt4 ENSDARG00000036505 421 0.976 - - - - - - - - 0.976 synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
71. nudt9 ENSDARG00000087927 1148 0.976 - - - - - - - - 0.976 nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
72. tfdp1b ENSDARG00000016304 3071 0.976 - - - - - - - - 0.976 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
73. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 0.976 - - - - - - - - 0.976 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
74. pcloa ENSDARG00000063299 353 0.976 - - - - - - - - 0.976 piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
75. gli2b ENSDARG00000020884 1468 0.976 - - - - - - - - 0.976 GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
76. commd4 ENSDARG00000061946 3281 0.975 - - - - - - - - 0.975 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
77. znf296 ENSDARG00000077897 658 0.975 - - - - - - - - 0.975 zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
78. gnb1b ENSDARG00000104372 1077 0.975 - - - - - - - - 0.975 guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
79. im:7136729 im:7136729 1625 0.975 - - - - - - - - 0.975
80. SENP7 SENP7 1097 0.975 - - - - - - - - 0.975
81. TRIO TRIO 1601 0.975 - - - - - - - - 0.975
82. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 0.975 - - - - - - - - 0.975 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
83. plekhg5a ENSDARG00000025902 397 0.974 - - - - - - - - 0.974 pleckstrin homology domain containing, family G (with RhoGef domain) member 5a [Source:ZFIN;Acc:ZDB-GENE-060503-766]
84. ccdc22 ENSDARG00000052379 2276 0.974 - - - - - - - - 0.974 coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
85. dpp3 ENSDARG00000020676 2393 0.974 - - - - - - - - 0.974 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
86. gpc1b ENSDARG00000090585 1393 0.974 - - - - - - - - 0.974 glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
87. ptprfa ENSDARG00000103479 1250 0.974 - - - - - - - - 0.974 protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
88. rhot1a ENSDARG00000099996 2059 0.973 - - - - - - - - 0.973 ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
89. tbc1d22a ENSDARG00000045510 363 0.973 - - - - - - - - 0.973 TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
90. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.973 - - - - - - - - 0.973 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
91. eefsec ENSDARG00000004696 791 0.973 - - - - - - - - 0.973 eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
92. KIF20B KIF20B 800 0.973 - - - - - - - - 0.973
93. hint2 ENSDARG00000100938 1053 0.973 - - - - - - - - 0.973 histidine triad nucleotide binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070410-139]
94. si:ch211-10d23.5 ENSDARG00000095510 2632 0.973 - - - - - - - - 0.973 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
95. ndst2a ENSDARG00000086269 754 0.973 - - - - - - - - 0.973 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
96. rpa1 ENSDARG00000003938 4403 0.973 - - - - - - - - 0.973 replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
97. nr1d4b ENSDARG00000059370 243 0.973 - - - - - - - - 0.973 nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
98. ncl1 2835 0.973 - - - - - - - - 0.973 nicalin, transcript variant X3
99. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.973 - - - - - - - - 0.973 G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
100. atp6v1f ENSDARG00000045543 3445 0.973 - - - - - - - - 0.973 ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]

There are 955 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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