Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mks1

Gene Name Gene ID Reads Annotation
mks1 ENSDARG00000059657, ENSDARG00000112247 126 Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]










Genes with expression patterns similar to mks1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mks1 ENSDARG00000059657, ENSDARG00000112247 126 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
2. nhlh2 ENSDARG00000025495 1860 2.412 0.930 0.723 - - - 0.759 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
3. gpr56 gpr56 523 1.778 - 0.905 - - - 0.873 - - -
4. WNK2 ENSDARG00000104989 429 1.735 0.825 - - - - 0.910 - - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
5. trim35-1 ENSDARG00000052037 43 1.714 - 0.833 - - - 0.881 - - - tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
6. BSN_1 BSN_1 21 1.67 0.789 - - - - 0.881 - - -
7. syt12 ENSDARG00000101776 215 1.653 0.755 - - - - 0.898 - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
8. calca ENSDARG00000056590 150 1.624 0.806 - - - - 0.818 - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
9. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.623 0.873 - - - - 0.750 - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
10. rprmb ENSDARG00000024006 120 1.613 0.907 - 0.706 - - - - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
11. CHRNB4 ENSDARG00000101677 128 1.61 0.865 - - - - 0.745 - - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
12. saga ENSDARG00000012610 63 1.594 - - - - - 0.817 0.777 - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
13. SYNDIG1 ENSDARG00000100751 165 1.573 - - 0.730 - - 0.843 - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
14. si:ch211-222k6.2 ENSDARG00000087046 144 1.563 0.789 - 0.774 - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
15. itgb1b ENSDARG00000104484 51 1.555 - 0.788 - - 0.767 - - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
16. nell2b ENSDARG00000062797 854 1.553 0.821 - - - - 0.732 - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
17. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 1.543 - - - - - 0.785 0.758 - - ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
18. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.533 0.789 0.744 - - - - - - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
19. map6 map6 70 1.521 0.705 - - - - 0.816 - - -
20. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 1.508 0.748 - - - - - 0.760 - - ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
21. GALNT9 ENSDARG00000006832 120 1.505 0.789 - - - - 0.716 - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
22. CLEC17A CLEC17A 42 1.493 - - 0.764 - 0.729 - - - -
23. si:ch211-162i8.5 ENSDARG00000111716 76 1.479 - - - - 0.712 - 0.767 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
24. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.47 0.767 - - - - 0.703 - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
25. armc5 ENSDARG00000078083 114 1.47 - - - - 0.739 0.731 - - - armadillo repeat containing 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7382]
26. wdr47b ENSDARG00000099757 93 1.45 - - 0.722 - - 0.728 - - - WD repeat domain 47b [Source:ZFIN;Acc:ZDB-GENE-121114-10]
27. CU693494.3 CU693494.3 169 1.448 0.744 0.704 - - - - - - -
28. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 1.447 0.715 - - - - 0.732 - - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
29. si:ch211-56a11.2 ENSDARG00000093677 196 1.425 - - - - - 0.719 0.706 - - si:ch211-56a11.2 [Source:ZFIN;Acc:ZDB-GENE-091204-123]
30. gstcd ENSDARG00000036494 95 1 1.000 - - - - - - - - glutathione S-transferase, C-terminal domain containing [Source:ZFIN;Acc:ZDB-GENE-050320-41]
31. syt5b ENSDARG00000011640 70 1 1.000 - - - - - - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
32. ldhd ENSDARG00000038845 110 1 1.000 - - - - - - - - lactate dehydrogenase D [Source:ZFIN;Acc:ZDB-GENE-030131-6140]
33. RBPMS ENSDARG00000099396 61 1 1.000 - - - - - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
34. grin2bb ENSDARG00000030376 60 0.979 0.979 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
35. si:dkey-17m8.2 ENSDARG00000035797 40 0.957 0.957 - - - - - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
36. si:dkeyp-68b7.7 ENSDARG00000038476, ENSDARG00000092766 96 0.957 - 0.957 - - - - - - - si:dkeyp-68b7.7 [Source:ZFIN;Acc:ZDB-GENE-070912-672]
37. si:ch73-91k6.8 si:ch73-91k6.8 37 0.957 0.957 - - - - - - - -
38. TENM2_1 ENSDARG00000037122 67 0.957 0.957 - - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
39. glcea ENSDARG00000005095 33 0.954 - - - - - 0.954 - - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
40. ebf1b ENSDARG00000069196 64 0.954 - - - - - 0.954 - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
41. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 0.941 0.941 - - - - - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
42. si:dkey-79f11.1 si:dkey-79f11.1 91 0.914 0.914 - - - - - - - -
43. slc1a3b ENSDARG00000043148 431 0.91 - - - - - 0.910 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
44. prdm12b ENSDARG00000007430 914 0.908 0.908 - - - - - - - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
45. fgf3 ENSDARG00000101540 75 0.905 - 0.905 - - - - - - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
46. pld3 ENSDARG00000068199 205 0.903 - 0.903 - - - - - - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
47. RAPGEF4 ENSDARG00000079872 82 0.9 - - - - - 0.900 - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
48. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 0.897 - - - - - 0.897 - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
49. EPS15L1 EPS15L1 22 0.895 - 0.895 - - - - - - -
50. si:dkey-270e21.7 si:dkey-270e21.7 155 0.895 0.895 - - - - - - - -
51. FUT9 FUT9 91 0.893 - - - - - 0.893 - - -
52. SATB1 SATB1 928 0.892 - - - - - - 0.892 - -
53. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 0.889 0.889 - - - - - - - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
54. her4.4 ENSDARG00000009822 50 0.886 - - - - - 0.886 - - - hairy-related 4, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-081031-104]
55. cep72 ENSDARG00000105258 344 0.883 - - - - - - 0.883 - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
56. CR847990.1 CR847990.1 21 0.883 - - - - - 0.883 - - -
57. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 0.881 - - - - - 0.881 - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
58. atp8b1 ENSDARG00000060980 181 0.881 - - - - - 0.881 - - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
59. RAI1 ENSDARG00000076679 59 0.881 - - - - - 0.881 - - - retinoic acid induced 1 [Source:ZFIN;Acc:ZDB-GENE-101203-2]
60. CU695076.1 CU695076.1 7 0.881 - - - - - 0.881 - - -
61. KIF21B ENSDARG00000009733 53 0.881 - - - - - 0.881 - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
62. prox1b ENSDARG00000088810, ENSDARG00000113014 33 0.881 - - - - - 0.881 - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
63. si:dkey-77f17.1 si:dkey-77f17.1 83 0.881 - - - - - 0.881 - - -
64. tph1b ENSDARG00000036082, ENSDARG00000112888 79 0.881 - - - - - 0.881 - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
65. BX571853.2 ENSDARG00000110441 21 0.881 - - - - - 0.881 - - -
66. dscama ENSDARG00000024865 75 0.879 0.879 - - - - - - - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
67. zgc:73228 zgc:73228 97 0.878 - - - - - 0.878 - - -
68. C1H20orf27 C1H20orf27 69 0.877 - - - - - 0.877 - - -
69. CAMSAP3 ENSDARG00000059475 263 0.876 - - - - - 0.876 - - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
70. si:ch211-208h1.1 si:ch211-208h1.1 262 0.876 - - - - - - 0.876 - -
71. senp5 ENSDARG00000060646 303 0.876 - - - - - - 0.876 - - SUMO specific peptidase 5 [Source:ZFIN;Acc:ZDB-GENE-050208-772]
72. b4galt2 ENSDARG00000077994 480 0.875 0.875 - - - - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
73. DKK3 DKK3 12 0.872 0.872 - - - - - - - -
74. gnaq ENSDARG00000011487 123 0.872 0.872 - - - - - - - - guanine nucleotide binding protein (G protein), q polypeptide [Source:ZFIN;Acc:ZDB-GENE-081104-25]
75. nrsn1 ENSDARG00000111235 123 0.872 0.872 - - - - - - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
76. CU694372.1 ENSDARG00000097988 105 0.872 0.872 - - - - - - - -
77. chek1 ENSDARG00000104765 1029 0.87 - - - - - - 0.870 - - checkpoint kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-896]
78. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.869 0.869 - - - - - - - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
79. PPP2R5B ENSDARG00000054931 213 0.868 - - - - - 0.868 - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
80. pfkfb4 pfkfb4 194 0.868 - - - - - - 0.868 - -
81. ucn3l ENSDARG00000087241 29 0.868 - 0.868 - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
82. BICD2 ENSDARG00000075571 401 0.867 - - - - - - 0.867 - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
83. flrt1b ENSDARG00000075597 465 0.867 0.867 - - - - - - - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
84. chga ENSDARG00000008829 1086 0.867 0.867 - - - - - - - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
85. BSN BSN 463 0.865 - - - - - 0.865 - - -
86. zgc:195282 ENSDARG00000079488 475 0.861 - - - - - - 0.861 - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
87. tmem160 ENSDARG00000069649 587 0.86 - - - - - - 0.860 - - transmembrane protein 160 [Source:ZFIN;Acc:ZDB-GENE-060503-851]
88. nrg2b ENSDARG00000086585 100 0.859 - - - - - 0.859 - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
89. CR848045.1 CR848045.1 459 0.858 - - - - - 0.858 - - -
90. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 0.858 - - - - - 0.858 - - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
91. si:dkey-243i1.1 ENSDARG00000034227 257 0.855 - - - - - - 0.855 - - si:dkey-243i1.1 [Source:ZFIN;Acc:ZDB-GENE-030131-6399]
92. BX324198.2 BX324198.2 84 0.854 - - - - - - 0.854 - -
93. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.853 - - - - - - 0.853 - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
94. FAXC FAXC 102 0.849 - - - - - 0.849 - - -
95. si:dkey-7l6.3 ENSDARG00000094514 146 0.848 - - - - - - 0.848 - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
96. TUB ENSDARG00000062165, ENSDARG00000111083 871 0.848 - - - - - 0.848 - - - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
97. socs1a ENSDARG00000038095 20 0.846 - - - - - 0.846 - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
98. PGBD4_6 PGBD4_6 107 0.846 - - - - - 0.846 - - -
99. galnt14 ENSDARG00000023448 102 0.845 - - - - - 0.845 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
100. cyb561a3b ENSDARG00000028257 60 0.845 - - - - - 0.845 - - - cytochrome b561 family, member A3b [Source:ZFIN;Acc:ZDB-GENE-091204-222]

There are 827 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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