Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-208h1.1

Gene Name Gene ID Reads Annotation
si:ch211-208h1.1 si:ch211-208h1.1 262










Genes with expression patterns similar to si:ch211-208h1.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-208h1.1 si:ch211-208h1.1 262 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CABZ01062083.1 CABZ01062083.1 40 2.446 - 0.816 - - 0.774 0.856 - - -
3. atpv0e2 ENSDARG00000059057 585 1.81 0.909 - - - - 0.901 - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
4. CR407547.1 ENSDARG00000117572 41 1.777 - 0.935 - - - 0.842 - - -
5. C4H12orf45 C4H12orf45 483 1.769 - - - - - 0.877 0.892 - -
6. pknox1.1_1 ENSDARG00000018765 203 1.759 - 0.947 - - - 0.812 - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
7. tbcela ENSDARG00000002682 1179 1.759 - - - - - 0.818 0.941 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
8. eltd1 eltd1 295 1.751 - - - - - 0.872 0.879 - -
9. st6gal1 ENSDARG00000044514 142 1.751 0.858 - - - - 0.893 - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
10. LIN9 ENSDARG00000028475 227 1.745 - - - - - 0.863 0.882 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
11. XKR7 ENSDARG00000026333 175 1.743 0.890 - - - - 0.853 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
12. slc30a10 ENSDARG00000103983 46 1.741 - - - - - 0.864 0.877 - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
13. ndst3 ENSDARG00000041776 605 1.728 - - - - - 0.851 0.877 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
14. ksr2 ENSDARG00000094526 134 1.725 0.840 - - - - 0.885 - - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
15. ENSDARG00000023499 ENSDARG00000023499 395 1.724 - - - 0.808 - - 0.916 - -
16. hs3st3l ENSDARG00000059903 184 1.718 0.805 - - - - 0.913 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
17. si:ch211-163b2.4 ENSDARG00000094890 140 1.71 - - - - - 0.865 0.845 - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
18. CT867948.2 CT867948.2 131 1.706 - - - - - 0.814 0.892 - -
19. slc1a1 ENSDARG00000020212 104 1.704 0.847 - - - - 0.857 - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
20. ENSDARG00000086878 ENSDARG00000086878 332 1.704 0.817 - - - - 0.887 - - -
21. CLIP3 ENSDARG00000054456 734 1.697 0.849 - - - - 0.848 - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
22. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.693 - - - - - 0.805 0.888 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
23. PPFIA3 ENSDARG00000077053 310 1.693 0.828 - - - - 0.865 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
24. CU463790.1 CU463790.1 60 1.692 - - - 0.826 - 0.866 - - -
25. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 1.691 - - - - - 0.827 0.864 - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
26. cbln1 ENSDARG00000057296 165 1.691 0.818 - - - - 0.873 - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
27. cdk10 ENSDARG00000034256 166 1.689 - - - - - 0.780 0.909 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
28. KCNS3 KCNS3 82 1.685 - - - - 0.804 0.881 - - -
29. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.674 0.846 - - - - 0.828 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
30. si:dkey-231k6.4 si:dkey-231k6.4 72 1.673 - 0.879 - - - 0.794 - - -
31. CR407704.1 CR407704.1 188 1.672 0.953 - - 0.719 - - - - -
32. rad21b ENSDARG00000035655 87 1.663 - 0.816 - - - 0.847 - - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
33. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.662 0.826 - - - - 0.836 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
34. si:ch211-162i8.5 ENSDARG00000111716 76 1.661 - - - - - 0.775 0.886 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
35. phc2b_1 ENSDARG00000013224 1316 1.659 0.750 - - - - 0.909 - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
36. si:dkey-10f21.16 si:dkey-10f21.16 252 1.658 - 0.832 - - - 0.826 - - -
37. C9H2orf69 C9H2orf69 148 1.656 0.844 - - - - 0.812 - - -
38. KCNJ3_1 KCNJ3_1 30 1.656 0.765 - - - - 0.891 - - -
39. C7H4orf48 C7H4orf48 1455 1.649 0.868 - - - - 0.781 - - -
40. aox3 aox3 399 1.648 - 0.947 - - 0.701 - - - -
41. lace1a lace1a 561 1.647 0.726 - - - - - 0.921 - -
42. si:dkey-245p14.4 ENSDARG00000070320 418 1.647 0.762 - - - - 0.885 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
43. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.644 - 0.852 - - - 0.792 - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
44. DLK1 60 1.64 0.765 - - - - 0.875 - - - delta like non-canonical Notch ligand 1
45. MAP1S_1 MAP1S_1 1117 1.64 - - - 0.815 - - 0.825 - -
46. kctd1 ENSDARG00000074056 652 1.634 - - - 0.784 - 0.850 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
47. si:dkey-265k11.2 si:dkey-265k11.2 44 1.634 0.765 - - - - - 0.869 - -
48. si:ch211-241e1.5 ENSDARG00000008906 70 1.633 - - - - 0.754 0.879 - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
49. scg2b ENSDARG00000038574 345 1.631 0.859 - - - - 0.772 - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
50. zgc:113307 ENSDARG00000044894 17 1.628 0.765 - - - - 0.863 - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
51. eno2 ENSDARG00000014287 2162 1.628 0.871 - - - - 0.757 - - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
52. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.628 - 0.775 - - - 0.853 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
53. phf10 ENSDARG00000070084 1210 1.626 - - - - - 0.835 0.791 - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
54. si:dkey-38p12.2 si:dkey-38p12.2 504 1.625 - - - 0.825 - 0.800 - - -
55. rab14_1 ENSDARG00000074246 481 1.625 - - - 0.771 - 0.854 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
56. htr3a ENSDARG00000089212 51 1.625 0.736 - - - - 0.889 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
57. ddx42 ENSDARG00000037928 1659 1.619 - - - - - 0.837 0.782 - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
58. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 1.619 0.831 - - 0.788 - - - - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
59. nxph1 ENSDARG00000033447 182 1.617 - - - - 0.756 0.861 - - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
60. gpr37b ENSDARG00000033296 283 1.617 - - - - 0.712 - 0.905 - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
61. kcng1 ENSDARG00000099038 23 1.615 0.765 - - - - 0.850 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
62. pcsk1nl ENSDARG00000076170 1232 1.608 0.820 - - - - 0.788 - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
63. chmp3 ENSDARG00000038064 577 1.607 - - - 0.736 - 0.871 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
64. ARID5B ENSDARG00000037196 165 1.605 0.765 - - - - 0.840 - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
65. CLDN20 26 1.603 0.765 - - - - 0.838 - - - claudin 20, transcript variant X2
66. xpnpep3 ENSDARG00000007916 166 1.602 - - - - - 0.723 0.879 - - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
67. mapta ENSDARG00000089314 2038 1.601 0.776 - - - - 0.825 - - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
68. LINGO2 LINGO2 300 1.599 - 0.718 - - - 0.881 - - -
69. rnf11a ENSDARG00000010442 592 1.598 - - - 0.754 - 0.844 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
70. adarb1a ENSDARG00000041609 476 1.59 0.709 - - - - 0.881 - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
71. zic3 ENSDARG00000071497 1448 1.59 0.703 - - - - 0.887 - - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
72. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.59 0.722 - - - - 0.868 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
73. zdhhc12b ENSDARG00000052787 43 1.588 0.765 - - - - 0.823 - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
74. grm4 ENSDARG00000040156 342 1.588 0.742 - - - - 0.846 - - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
75. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.588 0.797 - - - - 0.791 - - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
76. si:dkey-100n10.2 101 1.586 0.717 - - - - 0.869 - - - si:dkey-100n10.2
77. CABZ01065506.1 CABZ01065506.1 204 1.586 0.765 - - - - 0.821 - - -
78. si:dkey-17e6.2 si:dkey-17e6.2 72 1.585 0.765 - - 0.820 - - - - -
79. naif1 ENSDARG00000062753 176 1.584 0.802 - - - - 0.782 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
80. stmn2a ENSDARG00000033234 2272 1.581 0.795 - - - - 0.786 - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
81. CABZ01061567.1 CABZ01061567.1 295 1.578 - - - - - 0.830 0.748 - -
82. irx5a ENSDARG00000034043 1694 1.575 - 0.818 - - - 0.757 - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
83. syt11a ENSDARG00000057913 1145 1.574 0.801 - - - - 0.773 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
84. gng2_1 ENSDARG00000056831 113 1.574 - - - - 0.712 0.862 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
85. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 1.573 - - - 0.707 - 0.866 - - - novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
86. npdc1 npdc1 221 1.573 - 0.775 - 0.798 - - - - -
87. BX470131.1 BX470131.1 86 1.572 0.765 - - - - 0.807 - - -
88. lhfpl2b ENSDARG00000098153 132 1.569 - - - - - 0.706 0.863 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
89. si:ch211-215p11.4 si:ch211-215p11.4 67 1.566 - 0.720 - - - 0.846 - - -
90. tgfbrap1 ENSDARG00000061508 504 1.563 - - - - - 0.813 0.750 - - transforming growth factor, beta receptor associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-66]
91. atp2b3b ENSDARG00000023445 1424 1.562 0.735 - - - - 0.827 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
92. DVL3 1098 1.562 - - - - - 0.853 0.709 - - dishevelled segment polarity protein 3
93. si:dkey-78o7.3 ENSDARG00000100387 59 1.56 0.831 - - - 0.729 - - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
94. aplp1 ENSDARG00000098368 2317 1.558 0.827 - - - - 0.731 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
95. tmem200a ENSDARG00000031540 52 1.558 - 0.816 - - - 0.742 - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
96. pole ENSDARG00000058533, ENSDARG00000115430 381 1.557 - - - 0.750 - 0.807 - - - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
97. dph5 ENSDARG00000100242, ENSDARG00000115537 537 1.556 - 0.719 - - - - 0.837 - - diphthamide biosynthesis 5 [Source:ZFIN;Acc:ZDB-GENE-041114-85]
98. nrxn2a ENSDARG00000061454 291 1.555 0.832 - - - - 0.723 - - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
99. BX511227.1 ENSDARG00000102499 111 1.549 - 0.816 - - 0.733 - - - -
100. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.547 0.802 - - - - 0.745 - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]

There are 2079 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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