Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for isl1

Gene Name Gene ID Reads Annotation
isl1 ENSDARG00000004023 981 ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]










Genes with expression patterns similar to isl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. isl1 ENSDARG00000004023 981 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
2. ek1 ENSDARG00000020080 742 3.318 0.795 0.909 - - - 0.827 0.787 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
3. vgf ENSDARG00000105529 247 3.274 0.892 0.738 - - - 0.800 0.844 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
4. map7d2a ENSDARG00000068480 513 3.27 0.842 0.952 - - - 0.768 0.708 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
5. kcnn1a ENSDARG00000091306 95 3.226 0.815 0.745 - - - 0.774 0.892 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
6. cnrip1a ENSDARG00000091683 1491 3.158 0.730 0.893 - - - 0.765 0.770 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
7. cers6 ENSDARG00000053583 247 3.14 0.703 0.880 - - - 0.736 0.821 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
8. ZFHX3 ENSDARG00000103057 7759 3.097 0.748 - - - - 0.909 0.722 0.718 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
9. gap43 ENSDARG00000099744 4114 3.061 0.721 - - - - 0.854 0.740 - 0.746 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
10. clstn2 ENSDARG00000060637 548 3.055 0.732 - - 0.706 - 0.782 0.835 - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
11. slc6a1b ENSDARG00000039647 1301 2.657 0.866 - - - - 0.822 0.969 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
12. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.617 0.772 - - - - 0.915 0.930 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
13. vim ENSDARG00000010008 3551 2.596 0.750 - - - - 0.914 0.932 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
14. gpr144 gpr144 479 2.593 0.826 - - - - 0.842 0.925 - -
15. celf4 ENSDARG00000070045 1537 2.589 0.807 0.972 - - - - 0.810 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
16. CDK5R1 CDK5R1 562 2.578 0.826 - - - - 0.820 0.932 - -
17. rap2ip rap2ip 681 2.571 0.909 - - - - 0.823 0.839 - -
18. CU856359.2 CU856359.2 182 2.565 0.815 - - - - 0.860 0.890 - -
19. pcdh1gc5 ENSDARG00000104826 10052 2.563 0.859 - - - - 0.862 0.842 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
20. eno2 ENSDARG00000014287 2162 2.561 0.812 - - - - 0.871 0.878 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
21. pkd1b ENSDARG00000033029 461 2.55 - 0.922 - - - 0.710 0.918 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
22. Sep-03 Sep-03 1124 2.529 0.942 - - - - 0.744 0.843 - -
23. myt1b ENSDARG00000102879 5411 2.52 0.819 - - - - 0.917 0.784 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
24. atp1b4 ENSDARG00000053262 1337 2.511 0.709 - - - - 0.885 0.917 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
25. ptprnb ENSDARG00000077047 2743 2.509 0.740 - - - - 0.843 0.926 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
26. slc1a3a ENSDARG00000104431 9888 2.507 0.774 - - - - 0.843 0.890 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
27. PROCA1 ENSDARG00000069823 343 2.506 0.891 - - - - 0.746 0.869 - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
28. zic4 ENSDARG00000031307 1228 2.502 0.806 - - - - 0.817 0.879 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
29. gad2 ENSDARG00000015537 724 2.492 0.809 - - - - 0.875 0.808 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
30. plp1a ENSDARG00000103732 3544 2.491 0.736 - - - - 0.915 0.840 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
31. nrarpb ENSDARG00000018958 6225 2.484 - - - - - 0.906 0.839 - 0.739 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
32. si:ch73-21g5.7 ENSDARG00000093156 9412 2.479 0.758 - - - - 0.919 0.802 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
33. spock2 ENSDARG00000075393 791 2.475 0.901 - - - - 0.850 0.724 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
34. hmp19 2554 2.467 - - - - - 0.893 0.853 - 0.721 HMP19 protein
35. syt11a ENSDARG00000057913 1145 2.463 0.728 - - - - 0.878 0.857 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
36. sst1.1 ENSDARG00000040799 677 2.461 - 0.794 - - - 0.715 0.952 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
37. STMN3 ENSDARG00000038465 1009 2.457 0.771 - - 0.792 - 0.894 - - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
38. cacna2d3 ENSDARG00000078760 211 2.453 - 0.702 - - - 0.934 0.817 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
39. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.453 0.707 - - - - 0.842 0.904 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
40. nes ENSDARG00000088805 2710 2.451 0.710 - - - - 0.871 0.870 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
41. nova2 ENSDARG00000017673 7685 2.451 0.775 - - - - 0.839 0.837 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
42. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.445 0.882 - - - - 0.849 0.714 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
43. zic1 ENSDARG00000015567 2520 2.444 0.738 - - - - 0.804 0.902 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
44. dnm1b ENSDARG00000009281 219 2.439 0.735 0.896 - - - - 0.808 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
45. slc18a3a ENSDARG00000006356 1285 2.436 0.743 - - - - 0.899 0.794 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
46. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.435 - 0.715 - - - 0.872 0.848 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
47. tmem35 ENSDARG00000052567 5685 2.426 0.766 - - - - 0.795 0.865 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
48. BX511121.1 ENSDARG00000029997 1774 2.425 0.803 - - - - 0.713 0.909 - -
49. wnt4a ENSDARG00000071208 1157 2.42 0.704 - - - - 0.829 0.887 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
50. nadl1.2 695 2.418 0.758 - - - - 0.886 0.774 - - neural adhesion molecule L1.2, transcript variant X1
51. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.417 0.845 - - - - 0.796 0.776 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
52. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.415 0.782 - - - - 0.884 0.749 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
53. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.414 0.734 0.880 - - - - 0.800 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
54. prrt1 ENSDARG00000062208 368 2.405 - 0.745 - - - 0.824 0.836 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
55. MAP6 MAP6 643 2.403 0.751 - - - - 0.830 0.822 - -
56. sox2 ENSDARG00000070913 2763 2.397 0.729 - - - - 0.795 0.873 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
57. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.395 - 0.808 - 0.770 - 0.817 - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
58. sept5a ENSDARG00000013843 1206 2.388 0.758 - - - - 0.839 0.791 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
59. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 2.378 - - - 0.763 - 0.800 0.815 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
60. EFCC1 ENSDARG00000077826 1359 2.375 0.789 - - - - 0.825 0.761 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
61. atp6v0cb ENSDARG00000036577 3472 2.372 0.730 - - - - 0.853 0.789 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
62. hnrnpub ENSDARG00000004735 16496 2.366 0.729 - - - - 0.853 0.784 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
63. mllt11 ENSDARG00000071026 2518 2.365 0.739 - - - - 0.805 0.821 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
64. pcsk1nl ENSDARG00000076170 1232 2.355 0.746 - - - - 0.823 0.786 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
65. SPOCK1 ENSDARG00000074644 794 2.353 - 0.797 - - - - 0.804 0.752 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
66. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.353 0.744 - - - - 0.702 0.907 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
67. lgi1a ENSDARG00000020493 1218 2.349 0.703 - - - - 0.721 0.925 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
68. stmn1b ENSDARG00000033655 9491 2.345 0.788 - - - - 0.783 0.774 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
69. aplp1 ENSDARG00000098368 2317 2.328 0.722 - - - - 0.890 - - 0.716 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
70. ptf1a ENSDARG00000014479 349 2.322 - - - - - - 0.794 0.737 0.791 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
71. tuba1c ENSDARG00000055216 8384 2.32 0.770 - - - - 0.825 0.725 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
72. necap1 ENSDARG00000020798 612 2.314 0.855 - - - - 0.702 0.757 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
73. RASGRF2 RASGRF2 644 2.314 - - - 0.783 - 0.811 0.720 - -
74. itm2ca ENSDARG00000043448 1265 2.312 - - - 0.801 - 0.742 0.769 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
75. tox ENSDARG00000032317 9126 2.312 0.763 - - - - 0.815 0.734 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
76. AGO1 ENSDARG00000092644 4521 2.299 0.713 - - - - 0.820 0.766 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
77. si:dkey-100n10.2 101 2.294 0.808 - - - - 0.751 0.735 - - si:dkey-100n10.2
78. dtnbb ENSDARG00000013020 280 2.294 0.719 - - - - 0.719 0.856 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
79. PPFIA3 ENSDARG00000077053 310 2.289 0.782 - - - - 0.712 0.795 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
80. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.268 - 0.723 - - - 0.826 0.719 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
81. ckbb ENSDARG00000043257 3503 2.265 0.770 - - - - 0.736 0.759 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
82. epha4b ENSDARG00000011600 3110 2.263 0.747 - - - - 0.784 0.732 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
83. atp1b2a ENSDARG00000099203 4010 2.261 0.783 - - - - - 0.774 - 0.704 ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
84. FP016176.1 FP016176.1 7030 2.258 - - - - - 0.780 0.774 - 0.704
85. inab ENSDARG00000053248 3239 2.25 0.734 - - - - 0.795 - - 0.721 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
86. TUBB8P7_1 TUBB8P7_1 2722 2.25 0.748 - - - - 0.734 0.768 - -
87. dpysl3 ENSDARG00000002587 4381 2.246 0.784 - - - - 0.746 0.716 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
88. tmie ENSDARG00000069423 305 2.226 0.755 - - 0.722 - - 0.749 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
89. clgn ENSDARG00000009315 993 2.226 0.754 - - - - 0.707 0.765 - - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
90. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.215 0.721 - - - - 0.747 0.747 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
91. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.214 0.706 - - - - 0.739 0.769 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
92. SLC5A7 SLC5A7 453 2.195 0.750 - - - - 0.719 0.726 - -
93. im:7162084 im:7162084 665 2.179 - - - - - 0.719 0.747 - 0.713
94. dnajc5aa ENSDARG00000042948 2885 2.168 0.706 - - - - 0.702 0.760 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
95. ARHGAP22 ENSDARG00000076434 1406 2.156 - - - 0.717 - 0.738 - 0.701 - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
96. CU658147.1 CU658147.1 69 1.925 - 0.980 - - - - 0.945 - -
97. zgc:113531 ENSDARG00000038794 2063 1.92 - - - - - 0.943 0.977 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
98. CABZ01088330.1 CABZ01088330.1 679 1.886 - - - - - 0.940 0.946 - -
99. mnx2a ENSDARG00000042106 939 1.87 - - - - - 0.909 0.961 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
100. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.869 - - - - - 0.944 0.925 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]

There are 1916 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA