Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for iscub

Gene Name Gene ID Reads Annotation
iscub ENSDARG00000026582, ENSDARG00000115112 147 iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]










Genes with expression patterns similar to iscub

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. iscub ENSDARG00000026582, ENSDARG00000115112 147 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
2. CU929052.1 CU929052.1 642 2.507 0.840 - - - - 0.723 0.944 - -
3. rab4a ENSDARG00000019144 192 2.297 - 0.760 - - - - 0.716 - 0.821 RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
4. gcnt3 ENSDARG00000060471 37 1.835 - - - - 0.891 - 0.944 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
5. QSOX2 ENSDARG00000077174 26 1.779 - - - - 0.909 - 0.870 - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
6. si:ch211-237l4.6 ENSDARG00000056915 49 1.758 0.840 - - - - - 0.918 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
7. zgc:152977 ENSDARG00000077178 59 1.714 - - - - - - 0.944 - 0.770 zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
8. mir301c 84 1.702 - - - - - 0.739 - - 0.963 microRNA 301c
9. CD200_2 CD200_2 47 1.684 0.840 - - - 0.844 - - - -
10. FDXACB1 ENSDARG00000095750 98 1.682 - - - 0.861 - - - - 0.821 ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
11. dnaaf1 ENSDARG00000012030 58 1.669 - 0.761 - - 0.908 - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
12. ucn3l ENSDARG00000087241 29 1.667 - - - - - 0.723 0.944 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
13. TBC1D2 ENSDARG00000071304 16 1.667 - - - - - - 0.714 - 0.953 TBC1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-100]
14. BX890577.2 BX890577.2 94 1.665 - 0.776 - - 0.889 - - - -
15. fuom ENSDARG00000039422 82 1.662 - 0.776 - 0.886 - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
16. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1.634 - - - - 0.911 0.723 - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
17. si:ch211-203k16.3 ENSDARG00000069305 21 1.627 - - - - - 0.723 0.904 - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
18. spp1 ENSDARG00000044276 34 1.615 - 0.865 - - - 0.750 - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
19. nfat5 nfat5 94 1.612 - 0.817 - - - - 0.795 - -
20. si:dkeyp-87a6.2 ENSDARG00000093322 18 1.606 - - - 0.883 - 0.723 - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
21. BX640537.1 ENSDARG00000099408 192 1.602 - - - 0.863 - 0.739 - - -
22. wdr16 wdr16 532 1.595 - - - - 0.749 - - - 0.846
23. nif3l1 ENSDARG00000045249 28 1.594 - - - 0.871 - 0.723 - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
24. AL935174.1 ENSDARG00000109674 18 1.59 0.840 - - - - 0.750 - - -
25. rapgef5b ENSDARG00000074307 112 1.587 - - - - - - 0.763 - 0.824 Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
26. HUS1 ENSDARG00000101611 187 1.585 - - - - - 0.724 - - 0.861 HUS1 checkpoint clamp component [Source:HGNC Symbol;Acc:HGNC:5309]
27. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 1.584 - 0.737 - 0.847 - - - - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
28. mir196b ENSDARG00000081346 35 1.584 0.840 - - - - - 0.744 - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
29. chid1 ENSDARG00000069673 675 1.584 - 0.748 - 0.836 - - - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
30. cbr4 ENSDARG00000009074 240 1.58 - 0.780 - 0.800 - - - - - carbonyl reductase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1796]
31. C21H11orf82 C21H11orf82 50 1.575 - - - - 0.780 - 0.795 - -
32. hoxd12a ENSDARG00000059263 795 1.571 - 0.758 - - - - 0.813 - - homeobox D12a [Source:ZFIN;Acc:ZDB-GENE-990415-118]
33. TULP1_1 TULP1_1 260 1.558 - 0.722 - 0.836 - - - - -
34. ncdn ENSDARG00000098544 267 1.552 - - - 0.827 - - - - 0.725 neurochondrin [Source:ZFIN;Acc:ZDB-GENE-061220-6]
35. CU694256.1 ENSDARG00000097007 290 1.547 - 0.781 - - - 0.766 - - -
36. pigu ENSDARG00000075530 348 1.532 - - - 0.803 - - - - 0.729 phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
37. PLCL2 ENSDARG00000098826 596 1.515 - - - 0.728 - - 0.787 - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
38. IFI30 ENSDARG00000056378, ENSDARG00000112359 73 1.501 - - - - - 0.782 - - 0.719 interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
39. il17d ENSDARG00000010700, ENSDARG00000115462 102 1.472 - 0.701 - - 0.771 - - - - interleukin 17d [Source:ZFIN;Acc:ZDB-GENE-061031-4]
40. CABZ01077217.1_1 ENSDARG00000079145 184 1.468 0.764 0.704 - - - - - - - uncharacterized LOC100007503 [Source:NCBI gene;Acc:100007503]
41. bmp7b ENSDARG00000063230 337 1.467 - - - 0.712 0.755 - - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
42. si:dkey-10p5.10 ENSDARG00000099307 371 1.463 - 0.738 - 0.725 - - - - - si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
43. sin3aa ENSDARG00000079716 580 1.434 - - - 0.721 - - 0.713 - - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
44. atg9b ENSDARG00000055292 155 1.433 0.710 - - - - 0.723 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
45. ripply1 ENSDARG00000054103 367 1.416 - - - - 0.708 - - - 0.708 ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
46. fgf19 ENSDARG00000098663 12 0.97 - - - - - - - - 0.970 fibroblast growth factor 19 [Source:ZFIN;Acc:ZDB-GENE-030729-32]
47. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 0.963 - - - - - - - - 0.963
48. si:dkey-22l1.1 ENSDARG00000096743 5 0.963 - - - - - - - - 0.963 si:dkey-22l1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-74]
49. CABZ01084323.1 ENSDARG00000104937 5 0.963 - - - - - - - - 0.963 protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
50. SLC35D3 ENSDARG00000107442 12 0.963 - - - - - - - - 0.963 solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
51. si:dkey-216e24.4 si:dkey-216e24.4 14 0.963 - - - - - - - - 0.963
52. cth1 ENSDARG00000057328 13 0.963 - - - - - - - - 0.963 cysteine three histidine 1 [Source:ZFIN;Acc:ZDB-GENE-990806-20]
53. RNaseP_nuc RNaseP_nuc 7 0.963 - - - - - - - - 0.963
54. si:dkey-7e14.3 ENSDARG00000086055 50 0.962 - - - - - - 0.962 - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
55. ENSDARG00000091313 ENSDARG00000091313 6 0.962 - - - - - - - - 0.962
56. CR854923.1 CR854923.1 18 0.961 - - - - - - 0.961 - -
57. tbx18 ENSDARG00000036930 390 0.961 - - - - - - 0.961 - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
58. CR847504.1 ENSDARG00000102515 29 0.961 - - - - - - 0.961 - -
59. stub1 ENSDARG00000045228 105 0.96 - - - - - - - - 0.960 STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
60. drd4-rs ENSDARG00000001912 45 0.959 - - - - - - 0.959 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
61. si:ch211-202m22.1 ENSDARG00000094491 24 0.956 - - - - - - - - 0.956 si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
62. f2rl1.1 ENSDARG00000068856 47 0.953 - - - - - - 0.953 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
63. oprk1 ENSDARG00000006894 43 0.951 - - - - - - 0.951 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
64. fgf10b ENSDARG00000100475 17 0.951 - - - - - - 0.951 - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
65. fem1a ENSDARG00000067966 11 0.951 - - - - - - - - 0.951 fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
66. ABHD12B_1 ABHD12B_1 57 0.951 - - - - - - 0.951 - -
67. si:ch211-223a21.3 ENSDARG00000104737 28 0.95 - - - - - - - - 0.950 si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
68. CABZ01111953.1 ENSDARG00000099747 38 0.948 - - - - - - 0.948 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
69. ubtd1b ENSDARG00000079623 26 0.948 - - - - - - - - 0.948 ubiquitin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050913-62]
70. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 0.947 - - - - - - - - 0.947 methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
71. BX510934.1 ENSDARG00000087544 140 0.947 - - - - - - 0.947 - -
72. CABZ01080550.1 ENSDARG00000100621 3 0.944 - - - - - - 0.944 - -
73. IYD IYD 8 0.944 - - - - - - 0.944 - -
74. ppp2r3a ENSDARG00000077722 7 0.944 - - - - - - 0.944 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
75. TRIM8 TRIM8 5 0.944 - - - - - - 0.944 - -
76. FAM177B 9 0.944 - - - - - - 0.944 - - family with sequence similarity 177 member B
77. si:dkey-261l7.2 ENSDARG00000094345 51 0.944 - - - - - - 0.944 - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
78. GRINA GRINA 12 0.944 - - - - - - 0.944 - -
79. si:dkeyp-3f10.17 ENSDARG00000087254 1 0.944 - - - - - - 0.944 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
80. slc6a2 ENSDARG00000016141 49 0.944 - - - - - - 0.944 - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
81. si:ch211-233m11.3 si:ch211-233m11.3 1 0.944 - - - - - - 0.944 - -
82. slc6a18 ENSDARG00000068387 6 0.944 - - - - - - 0.944 - - solute carrier family 6 (neutral amino acid transporter), member 18 [Source:ZFIN;Acc:ZDB-GENE-080219-9]
83. gata4 ENSDARG00000098952 11 0.944 - - - - - - 0.944 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
84. ZC3H12A ENSDARG00000005271 5 0.944 - - - - - - 0.944 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
85. CR387932.1 ENSDARG00000097344 2 0.944 - - - - - - 0.944 - -
86. smad6b ENSDARG00000031763 12 0.944 - - - - - - 0.944 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
87. BX323836.1 BX323836.1 1 0.944 - - - - - - 0.944 - -
88. LRRC69 LRRC69 1 0.944 - - - - - - 0.944 - -
89. CU633857.1 ENSDARG00000115315 21 0.944 - - - - - - 0.944 - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
90. CR388163.4 CR388163.4 4 0.944 - - - - - - 0.944 - -
91. si:ch73-189n23.1 ENSDARG00000086247 15 0.944 - - - - - - 0.944 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
92. npffr1l3 ENSDARG00000010712 18 0.944 - - - - - - 0.944 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
93. CABZ01034857.1 CABZ01034857.1 1 0.944 - - - - - - 0.944 - -
94. g6pcb ENSDARG00000014967 8 0.944 - - - - - - 0.944 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
95. tbx5b ENSDARG00000092060 37 0.944 - - - - - - 0.944 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
96. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 0.944 - - - - - - 0.944 - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
97. satb2 ENSDARG00000061885 6 0.944 - - - - - - 0.944 - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
98. CYP27A1_2 CYP27A1_2 5 0.944 - - - - - - 0.944 - -
99. GALNTL6 ENSDARG00000040048 33 0.944 - - - - - - 0.944 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
100. SEMA6B SEMA6B 35 0.944 - - - - - - 0.944 - -

There are 1329 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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