Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for chid1

Gene Name Gene ID Reads Annotation
chid1 ENSDARG00000069673 675 chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]










Genes with expression patterns similar to chid1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. chid1 ENSDARG00000069673 675 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
2. si:ch211-232i5.1 ENSDARG00000078072 1337 1.956 - - - - - 0.995 - - 0.961 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
3. CABZ01039859.1 ENSDARG00000076361 540 1.928 - - - - - 0.987 - - 0.941 beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
4. dus3l ENSDARG00000099528 1192 1.913 - - - - - 0.998 - - 0.915 dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
5. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 1.904 - - - - - 0.998 - - 0.906 integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
6. gk5 ENSDARG00000062864 738 1.897 - - - - - 0.997 - - 0.900 glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
7. smox ENSDARG00000036967 3816 1.879 - - - - - 0.982 - - 0.897 spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
8. foxq1b ENSDARG00000055395 549 1.867 0.875 - - - - 0.992 - - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
9. fh ENSDARG00000075132 1340 1.867 - - - - - 0.993 - - 0.874 fumarate hydratase [Source:ZFIN;Acc:ZDB-GENE-010724-6]
10. myo1eb ENSDARG00000009133, ENSDARG00000109491 2396 1.836 - - - - - 0.983 - - 0.853 myosin IE, b [Source:ZFIN;Acc:ZDB-GENE-040426-1347]
11. zgc:77391 zgc:77391 1445 1.823 - - - - - 0.995 - - 0.828
12. zgc:112263 zgc:112263 473 1.817 - 0.858 - - - - - - 0.959
13. BX004880.1 BX004880.1 638 1.81 - - - - - - 0.864 - 0.946
14. lrrc20 ENSDARG00000105018 1970 1.808 - - - - - 0.990 - - 0.818 leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
15. MAP1S_1 MAP1S_1 1117 1.787 - - - - - 0.996 0.791 - -
16. ythdf3 ENSDARG00000057939 475 1.779 - - - - - - 0.820 - 0.959 YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
17. slc25a39 ENSDARG00000007449 630 1.767 0.814 - - - - - - - 0.953 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
18. mau2 ENSDARG00000042056 2378 1.755 - - - - - 0.987 - - 0.768 MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
19. tp53i11b ENSDARG00000006025 569 1.748 - - - 0.773 - - - - 0.975 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
20. stk40 ENSDARG00000098135 2683 1.734 - - - - - 0.988 0.746 - - serine/threonine kinase 40 [Source:ZFIN;Acc:ZDB-GENE-030131-4831]
21. DUSP13_1 DUSP13_1 425 1.728 - 0.729 - - - 0.999 - - -
22. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 1.728 - - - - - - 0.787 - 0.941 calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
23. prc1a ENSDARG00000100918 1746 1.726 0.729 - - - - 0.997 - - - protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
24. SLC25A22 2190 1.717 - - - - - 0.986 0.731 - - solute carrier family 25 (mitochondrial carrier: glutamate), member 22, transcript variant X2
25. GRAMD2 GRAMD2 300 1.715 - 0.767 - - - - - - 0.948
26. cpne1 ENSDARG00000075536 4063 1.689 - - - - - 0.984 0.705 - - copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
27. trpc4apb ENSDARG00000020647 670 1.684 - - - 0.717 - - - - 0.967 transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
28. pnpla7b ENSDARG00000040002 1217 1.678 0.771 - - - - - - - 0.907 patatin-like phospholipase domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-050309-66]
29. tbp ENSDARG00000014994 1591 1.663 - - - - - - 0.730 - 0.933 TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
30. fuom ENSDARG00000039422 82 1.662 - 0.871 - 0.791 - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
31. vgll4a ENSDARG00000094332 1410 1.653 0.796 - - - - - - - 0.857 vestigial-like family member 4a [Source:ZFIN;Acc:ZDB-GENE-100922-230]
32. C5H9orf78 C5H9orf78 1550 1.636 - - - - - - 0.727 - 0.909
33. traf6 ENSDARG00000028058 478 1.635 - - - 0.789 - - - - 0.846 TNF receptor-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5735]
34. ccr12.3 ccr12.3 79 1.632 0.864 0.768 - - - - - - -
35. mical1 ENSDARG00000011809 586 1.619 - - - - - - 0.705 - 0.914 microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081022-3]
36. BACH1 BACH1 1021 1.614 - - - - - - 0.717 - 0.897
37. limk1b ENSDARG00000003022 172 1.613 0.842 - - 0.771 - - - - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
38. mcat ENSDARG00000016613, ENSDARG00000096473 140 1.612 0.872 - - 0.740 - - - - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-041111-231]
39. timp2b ENSDARG00000075261 867 1.607 0.727 - - - - - - - 0.880 TIMP metallopeptidase inhibitor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2655]
40. dgat1b ENSDARG00000054914 119 1.586 0.858 0.728 - - - - - - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
41. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.584 - 0.748 - 0.836 - - - - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
42. cbr4 ENSDARG00000009074 240 1.58 - 0.825 - 0.755 - - - - - carbonyl reductase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1796]
43. man1b1 man1b1 3294 1.57 0.772 - - - - - - - 0.798
44. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.546 - - - 0.828 - - 0.718 - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
45. pcdh17 ENSDARG00000027041 260 1.54 0.798 - - 0.742 - - - - - protocadherin 17 [Source:ZFIN;Acc:ZDB-GENE-090608-3]
46. cdc16 ENSDARG00000055470, ENSDARG00000111307 347 1.538 - 0.786 - 0.752 - - - - - cell division cycle 16 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051113-132]
47. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.514 0.726 - - - - - - - 0.788 OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
48. rpap1 ENSDARG00000075072, ENSDARG00000117161 250 1.498 0.724 - - 0.774 - - - - - RNA polymerase II associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-090914-1]
49. si:dkey-287i17.3 si:dkey-287i17.3 228 1.498 0.740 - - 0.758 - - - - -
50. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 1.495 - 0.734 - 0.761 - - - - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
51. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 1.418 - - - 0.702 - - 0.716 - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
52. CABZ01035189.1 CABZ01035189.1 1070 0.999 - - - - - 0.999 - - -
53. cradd ENSDARG00000028192 153 0.999 - - - - - 0.999 - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
54. efcab7 ENSDARG00000020279 1030 0.999 - - - - - 0.999 - - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
55. pigs ENSDARG00000017813 718 0.999 - - - - - 0.999 - - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
56. ins ENSDARG00000035350, ENSDARG00000116735 317 0.999 - - - - - 0.999 - - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
57. irs2 irs2 392 0.999 - - - - - 0.999 - - -
58. si:dkey-221j11.3 ENSDARG00000093304 1001 0.999 - - - - - 0.999 - - - si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
59. CU571255.1 CU571255.1 902 0.999 - - - - - 0.999 - - -
60. zgc:153924 507 0.999 - - - - - 0.999 - - - zgc:153924
61. FAM117A_1 FAM117A_1 360 0.999 - - - - - 0.999 - - -
62. chmp4c ENSDARG00000007418, ENSDARG00000110750 729 0.999 - - - - - 0.999 - - - charged multivesicular body protein 4C [Source:ZFIN;Acc:ZDB-GENE-050417-389]
63. BX322787.1 ENSDARG00000105779 381 0.998 - - - - - 0.998 - - -
64. nom1 ENSDARG00000060027, ENSDARG00000112720 831 0.998 - - - - - 0.998 - - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
65. ing2 ENSDARG00000104907 1336 0.998 - - - - - 0.998 - - - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
66. dot1l ENSDARG00000061992 602 0.998 - - - - - 0.998 - - - DOT1-like histone H3K79 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060503-341]
67. epc1 epc1 1164 0.998 - - - - - 0.998 - - -
68. iqsec2 iqsec2 304 0.998 - - - - - 0.998 - - -
69. PHYHIP ENSDARG00000116497 456 0.998 - - - - - 0.998 - - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
70. orc4 ENSDARG00000101161 1081 0.998 - - - - - 0.998 - - - origin recognition complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2224]
71. sox7 ENSDARG00000030125 806 0.998 - - - - - 0.998 - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
72. cwc22 ENSDARG00000014008 2385 0.998 - - - - - 0.998 - - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
73. CABZ01041962.1 ENSDARG00000076082 690 0.998 - - - - - 0.998 - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
74. RMDN2 ENSDARG00000078761 717 0.998 - - - - - 0.998 - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
75. MON1B_1 MON1B_1 697 0.998 - - - - - 0.998 - - -
76. SNORA21 SNORA21 547 0.998 - - - - - 0.998 - - -
77. C13H9orf72 C13H9orf72 2310 0.998 - - - - - 0.998 - - -
78. kcna1 kcna1 174 0.998 - - - - - 0.998 - - -
79. tmed7 ENSDARG00000046022 2435 0.998 - - - - - 0.998 - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
80. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 0.998 - - - - - 0.998 - - - eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
81. RAB11FIP5 RAB11FIP5 626 0.998 - - - - - 0.998 - - -
82. si:dkey-9i23.16 ENSDARG00000093954 929 0.997 - - - - - 0.997 - - - si:dkey-9i23.16 [Source:ZFIN;Acc:ZDB-GENE-090313-362]
83. oacyl ENSDARG00000075191 351 0.997 - - - - - 0.997 - - - O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-090710-2]
84. ssh2a ENSDARG00000088440 1149 0.997 - - - - - 0.997 - - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
85. eif2ak1 ENSDARG00000093182, ENSDARG00000112267 695 0.997 - - - - - 0.997 - - - eukaryotic translation initiation factor 2-alpha kinase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-268]
86. stk38a ENSDARG00000019973 1343 0.997 - - - - - 0.997 - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
87. suv420h1 1810 0.997 - - - - - 0.997 - - - suppressor of variegation 4-20 homolog 1 (Drosophila)
88. dnah9l ENSDARG00000062630 268 0.997 - - - - - 0.997 - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
89. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 0.997 - - - - - 0.997 - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
90. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 0.997 - - - - - 0.997 - - - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
91. sec62 ENSDARG00000019951 3724 0.997 - - - - - 0.997 - - - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
92. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 0.997 - - - - - 0.997 - - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
93. crfb17 511 0.997 - - - - - 0.997 - - - cytokine receptor family member B17
94. fbxl22 ENSDARG00000096995 1290 0.997 - - - - - 0.997 - - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
95. mier1a ENSDARG00000041072 1690 0.997 - - - - - 0.997 - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
96. rpa2 ENSDARG00000037188 4284 0.997 - - - - - 0.997 - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
97. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 0.997 - - - - - 0.997 - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
98. smim7 ENSDARG00000074848 1260 0.997 - - - - - 0.997 - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
99. ano10a ENSDARG00000057736 1306 0.996 - - - - - 0.996 - - - anoctamin 10a [Source:ZFIN;Acc:ZDB-GENE-050913-43]
100. ssu72 ENSDARG00000031216 2350 0.996 - - - - - 0.996 - - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]

There are 1358 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA