Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for imp4

Gene Name Gene ID Reads Annotation
imp4 ENSDARG00000054540 1396 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]










Genes with expression patterns similar to imp4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. imp4 ENSDARG00000054540 1396 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
2. BRCC3 ENSDARG00000098242 1123 2.476 - - - - - 0.998 0.732 0.746 - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
3. paf1 ENSDARG00000098432 1806 2.364 - 0.743 - - - - 0.734 - 0.887 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
4. ube2g1b ENSDARG00000069527 5376 2.239 - 0.705 - - - - 0.765 - 0.769 ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
5. u2af2a ENSDARG00000012505 2920 2.217 - 0.705 - - - - 0.808 - 0.704 U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
6. ide ENSDARG00000075570 4331 1.95 - - - - - 0.994 - - 0.956 insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
7. stxbp3 ENSDARG00000008142 2604 1.945 - - - - - 0.995 - - 0.950 syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
8. CASKIN2_1 CASKIN2_1 2299 1.843 - - - - - 0.996 - - 0.847
9. IKZF2 ENSDARG00000069111 1366 1.823 - - - - - 0.967 - - 0.856 IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
10. FUZ ENSDARG00000079730 821 1.82 - - - - - - 0.871 - 0.949 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
11. klhl41a ENSDARG00000068888 1034 1.814 - - - - - 0.995 0.819 - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
12. TPMT TPMT 138 1.802 - - - - - - 0.845 - 0.957
13. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.799 - - - - - - 0.900 - 0.899 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
14. si:ch73-91k6.2 ENSDARG00000091598 727 1.798 - - - - - - 0.867 - 0.931 si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
15. cyb561a3a ENSDARG00000056281 667 1.797 - - - - - 0.997 0.800 - - cytochrome b561 family, member A3a [Source:ZFIN;Acc:ZDB-GENE-060526-374]
16. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 1.791 - - - - - - 0.888 - 0.903 laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
17. aebp1 ENSDARG00000091726 906 1.789 - - - - - - 0.856 - 0.933 AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
18. pcmt ENSDARG00000015201 5132 1.776 - 0.802 - - - 0.974 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
19. parn ENSDARG00000102634 2049 1.775 - - - - - 0.996 - 0.779 - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
20. grhl3 ENSDARG00000078552 897 1.771 - - - - - - 0.852 - 0.919 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
21. atrip ENSDARG00000063076 385 1.77 - - - - - - 0.829 - 0.941 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
22. mrpl41 ENSDARG00000002264 1756 1.768 - 0.772 - - - 0.996 - - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
23. CABZ01008011.1 CABZ01008011.1 761 1.737 - - - - - - - 0.778 0.959
24. wu:fc51f04 wu:fc51f04 7074 1.735 - 0.759 - - - 0.976 - - -
25. usp28 ENSDARG00000008880 1850 1.716 - 0.729 - - - 0.987 - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
26. gcn1l1 gcn1l1 6031 1.71 - - - - - 0.993 - - 0.717
27. prmt10 prmt10 312 1.705 - - - - - - 0.742 - 0.963
28. prpf6 ENSDARG00000091367 1868 1.701 - - - - - - 0.758 - 0.943 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
29. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.698 - - - - - - 0.736 - 0.962 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
30. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.697 - - - - - 0.995 - - 0.702 trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
31. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 1.697 - 0.706 - - - 0.991 - - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]
32. txn2 ENSDARG00000034777 4071 1.697 - 0.708 - - - 0.989 - - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
33. BX569781.3 BX569781.3 576 1.689 - - - - - - 0.731 - 0.958
34. sipa1l1 ENSDARG00000020134 565 1.689 - - - - - - 0.759 - 0.930 signal-induced proliferation-associated 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9909]
35. AC024175.17 AC024175.17 59065 1.689 - - - - - 0.933 0.756 - -
36. nt5dc3 ENSDARG00000062949 816 1.674 - 0.839 - - - - - - 0.835 5'-nucleotidase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080523-3]
37. pacs1a ENSDARG00000044556, ENSDARG00000117043 914 1.672 - - - - - - 0.812 - 0.860 phosphofurin acidic cluster sorting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050208-244]
38. tp53i11b ENSDARG00000006025 569 1.67 - 0.705 - - - - - - 0.965 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
39. trpc4apb ENSDARG00000020647 670 1.669 - - - 0.712 - - - - 0.957 transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
40. Mar-02 Mar-02 1812 1.658 - - - - - - 0.711 - 0.947
41. ARHGEF5 2727 1.657 - - - - - 0.924 0.733 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
42. C21H5orf15 C21H5orf15 2318 1.649 - - - - - - 0.887 - 0.762
43. si:dkey-43f9.4 si:dkey-43f9.4 180 1.645 - - - 0.719 - - 0.926 - -
44. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.643 - 0.711 - - - - - - 0.932 ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
45. USP15 958 1.634 - 0.762 - - - - - - 0.872 ubiquitin specific peptidase 15
46. Sep-12 Sep-12 1828 1.625 - 0.720 - - - - - - 0.905
47. extl2 ENSDARG00000063191 118 1.624 - - - 0.710 - - 0.914 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
48. dnajc5ab ENSDARG00000004836 2923 1.623 - 0.752 - - - - 0.871 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
49. fntb ENSDARG00000027916 736 1.62 - 0.704 - - - - 0.916 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
50. kcnh6 kcnh6 59 1.618 - - - 0.714 - - 0.904 - -
51. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.615 - - - - - - 0.825 - 0.790 ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
52. atad5a ENSDARG00000070568 1840 1.605 - 0.732 - - - - 0.873 - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
53. crebbpa ENSDARG00000104609 1739 1.601 - - - - - - 0.768 - 0.833 CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
54. rnf20 ENSDARG00000016664 3641 1.575 - 0.729 - - - - - - 0.846 ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
55. ndc1 ENSDARG00000021120 2417 1.564 - 0.759 - - - - 0.805 - - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
56. alpk3a ENSDARG00000078989 1992 1.544 - 0.717 - - - - - - 0.827 alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
57. smg7 ENSDARG00000060767 2759 1.54 - 0.781 - - - - 0.759 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
58. MZT1 ENSDARG00000096668 2514 1.518 - 0.800 - - - - 0.718 - - mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
59. pdxdc1 ENSDARG00000101886 1958 1.517 - - - - - - 0.731 - 0.786 pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
60. sall4 ENSDARG00000044485 1694 1.516 - - - - - - 0.711 - 0.805 spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
61. pwp2h ENSDARG00000037109 1395 1.51 0.704 0.806 - - - - - - - PWP2 periodic tryptophan protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-021031-3]
62. tfap4 ENSDARG00000103923 2203 1.493 - 0.750 - - - - - - 0.743 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
63. trim71 ENSDARG00000075593 2750 1.488 - - - - - - 0.706 - 0.782 tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
64. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.474 0.719 - - - - - - - 0.755 mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
65. SAYSD1 SAYSD1 149 1.464 - - - 0.722 - - 0.742 - -
66. rac2 ENSDARG00000038010 5837 1.456 - - - - - - 0.729 - 0.727 Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
67. fgfr1op ENSDARG00000003058 449 1.427 - 0.718 - - - - 0.709 - - FGFR1 oncogene partner [Source:ZFIN;Acc:ZDB-GENE-090417-1]
68. VPS37C ENSDARG00000031836 906 0.999 - - - - - 0.999 - - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
69. tmem134 ENSDARG00000024828 3241 0.998 - - - - - 0.998 - - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
70. PROSER1 ENSDARG00000086302 1935 0.998 - - - - - 0.998 - - - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
71. fktn ENSDARG00000059437, ENSDARG00000109351 340 0.998 - - - - - 0.998 - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
72. hdac9b ENSDARG00000056642 1148 0.998 - - - - - 0.998 - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
73. vac14 ENSDARG00000014303 941 0.998 - - - - - 0.998 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
74. tnni2b.2 ENSDARG00000029995 935 0.997 - - - - - 0.997 - - - troponin I type 2b (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-9]
75. nog2 ENSDARG00000043066 233 0.997 - - - - - 0.997 - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
76. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.997 - - - - - 0.997 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
77. c1qtnf4 ENSDARG00000024299 578 0.997 - - - - - 0.997 - - - C1q and TNF related 4 [Source:ZFIN;Acc:ZDB-GENE-050417-198]
78. lap3 ENSDARG00000061981 1188 0.997 - - - - - 0.997 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
79. pld2 ENSDARG00000034262 952 0.997 - - - - - 0.997 - - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
80. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.997 - - - - - 0.997 - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
81. tdrd3 ENSDARG00000025421 633 0.997 - - - - - 0.997 - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
82. pbxip1b ENSDARG00000011824 3726 0.997 - - - - - 0.997 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
83. pgm2 ENSDARG00000018178 985 0.997 - - - - - 0.997 - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
84. clip2 ENSDARG00000059596 529 0.996 - - - - - 0.996 - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
85. rbm42 ENSDARG00000039910 1111 0.996 - - - - - 0.996 - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
86. zfyve21 ENSDARG00000027887 1687 0.996 - - - - - 0.996 - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
87. si:dkey-3d4.3 ENSDARG00000074079 365 0.996 - - - - - 0.996 - - - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
88. ppp2r2a ppp2r2a 5785 0.996 - - - - - 0.996 - - -
89. zgc:112484 zgc:112484 780 0.996 - - - - - 0.996 - - -
90. PRIM2 ENSDARG00000052721 825 0.996 - - - - - 0.996 - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
91. rc3h1 rc3h1 1087 0.996 - - - - - 0.996 - - -
92. SLC6A16 SLC6A16 630 0.996 - - - - - 0.996 - - -
93. zmat5 ENSDARG00000035434 983 0.996 - - - - - 0.996 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
94. sec63 ENSDARG00000017740 3789 0.996 - - - - - 0.996 - - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
95. mst4 mst4 1672 0.996 - - - - - 0.996 - - -
96. trim44 ENSDARG00000051761 509 0.996 - - - - - 0.996 - - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
97. amt ENSDARG00000010862, ENSDARG00000113280 367 0.996 - - - - - 0.996 - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
98. TRIM35_3 TRIM35_3 172 0.996 - - - - - 0.996 - - -
99. zmynd8 ENSDARG00000007601 405 0.996 - - - - - 0.996 - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
100. dfna5 dfna5 361 0.996 - - - - - 0.996 - - -

There are 1585 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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