Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ift88

Gene Name Gene ID Reads Annotation
ift88 ENSDARG00000027234, ENSDARG00000113909 168 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]










Genes with expression patterns similar to ift88

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ift88 ENSDARG00000027234, ENSDARG00000113909 168 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]
2. mcph1 ENSDARG00000058372 51 1.731 - 0.818 - - - - 0.913 - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
3. si:ch73-167f18.4 si:ch73-167f18.4 9 1.713 - 0.874 - - - - 0.839 - -
4. toporsb ENSDARG00000105028 1898 1.631 - - - 0.877 - 0.754 - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
5. numbl ENSDARG00000101949, ENSDARG00000112946 87 1.614 - 0.701 - - - - 0.913 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
6. rgs12a ENSDARG00000009610 284 1.555 - 0.745 - - - - 0.810 - - regulator of G protein signaling 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2614]
7. FGL1 ENSDARG00000105380 147 1.54 0.741 - - - - - 0.799 - - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
8. CU633908.1 ENSDARG00000113928 222 1.511 - - - 0.769 - 0.742 - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
9. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.503 - - - - - 0.710 0.793 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
10. asb12b ENSDARG00000037558, ENSDARG00000113049, ENSDARG00000116721 378 1.478 - 0.734 - - - - 0.744 - - ankyrin repeat and SOCS box-containing 12b [Source:ZFIN;Acc:ZDB-GENE-040822-25]
11. efna3a ENSDARG00000014675 68 1.477 - - - - - 0.714 0.763 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
12. bicc1b ENSDARG00000070497 406 1.47 - 0.719 - 0.751 - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
13. adamts10 ENSDARG00000075188 225 1.469 - 0.701 - 0.768 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 10 [Source:ZFIN;Acc:ZDB-GENE-081104-414]
14. ache ENSDARG00000031796 1985 1.45 - 0.710 - - - 0.740 - - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
15. shisa4 ENSDARG00000006307, ENSDARG00000112041 109 0.957 - 0.957 - - - - - - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
16. mapk8a ENSDARG00000031888 44 0.951 - - - - - - 0.951 - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
17. si:ch1073-219n12.1 71 0.951 - - - - - - 0.951 - - si:ch1073-219n12.1, transcript variant X1
18. dnajb2 ENSDARG00000058644 30 0.951 - - - - - - 0.951 - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
19. PLA2G3 ENSDARG00000008948 23 0.951 - - - - - - 0.951 - - phospholipase A2 group III [Source:ZFIN;Acc:ZDB-GENE-051113-96]
20. ATP5J2 68 0.945 - 0.945 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
21. crfb1 ENSDARG00000068681, ENSDARG00000111369, ENSDARG00000112496 75 0.944 - 0.944 - - - - - - - cytokine receptor family member b1 [Source:ZFIN;Acc:ZDB-GENE-030131-8673]
22. znf532 ENSDARG00000052894 118 0.944 - 0.944 - - - - - - - zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]
23. fam160b1 ENSDARG00000060168 22 0.941 - 0.941 - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
24. cd247l ENSDARG00000077240 25 0.913 - - - - - - 0.913 - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
25. ALOX5 ALOX5 0 0.913 - - - - - - 0.913 - -
26. myo5b_1 ENSDARG00000062003 6 0.913 - - - - - - 0.913 - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
27. prf1.5 ENSDARG00000037598, ENSDARG00000113302 3 0.913 - - - - - - 0.913 - - perforin 1.5 [Source:ZFIN;Acc:ZDB-GENE-081105-3]
28. prnpb ENSDARG00000044048, ENSDARG00000115858 9 0.913 - - - - - - 0.913 - - prion protein b [Source:ZFIN;Acc:ZDB-GENE-041221-2]
29. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 0.913 - - - - - - 0.913 - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
30. arf3a ENSDARG00000070539 29 0.913 - - - - - - 0.913 - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
31. si:ch211-240g9.1 36 0.913 - - - - - - 0.913 - - si:ch211-240g9.1
32. HELZ2 ENSDARG00000012600 2 0.913 - - - - - - 0.913 - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
33. SCAMP5 SCAMP5 19 0.913 - - - - - - 0.913 - -
34. CABZ01117437.1 CABZ01117437.1 11 0.913 - - - - - - 0.913 - -
35. GPC5 GPC5 11 0.913 - - - - - - 0.913 - -
36. kdm2ba ENSDARG00000036593 96 0.913 - - - - - - 0.913 - - lysine (K)-specific demethylase 2Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2195]
37. si:ch211-213i16.4 8 0.913 - - - - - - 0.913 - - si:ch211-213i16.4, transcript variant X1
38. rhoab ENSDARG00000094673 26 0.913 - - - - - - 0.913 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
39. cplx4a ENSDARG00000059978 6 0.913 - - - - - - 0.913 - - complexin 4a [Source:ZFIN;Acc:ZDB-GENE-060526-116]
40. CU633848.1 CU633848.1 4 0.913 - - - - - - 0.913 - -
41. si:dkey-208k4.1 si:dkey-208k4.1 15 0.913 - - - - - - 0.913 - -
42. si:ch211-106n13.3 ENSDARG00000052633 3 0.913 - - - - - - 0.913 - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
43. znf536 ENSDARG00000103648 6 0.913 - - - - - - 0.913 - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
44. foxm1 ENSDARG00000003200 8 0.913 - - - - - - 0.913 - - forkhead box M1 [Source:ZFIN;Acc:ZDB-GENE-040426-1275]
45. si:dkey-96l17.6 ENSDARG00000094540 4 0.913 - - - - - - 0.913 - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
46. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 0.913 - - - - - - 0.913 - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
47. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.913 - - - - - - 0.913 - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
48. si:dkey-21o19.2 ENSDARG00000088900 52 0.913 - - - - - - 0.913 - - si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
49. FP016199.1 FP016199.1 43 0.913 - - - - - - 0.913 - -
50. wu:fb63a08 38 0.913 - - - - - - 0.913 - - wu:fb63a08
51. si:ch211-113a14.26_4 31 0.913 - - - - - - 0.913 - - si:ch211-113a14.26
52. wu:fb37b09 wu:fb37b09 10685 0.913 - - - - - - 0.913 - -
53. zdhhc12b ENSDARG00000052787 43 0.913 - - - - - - 0.913 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
54. stk33 ENSDARG00000054318, ENSDARG00000114909 34 0.913 - - - - - - 0.913 - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
55. elmod3 ENSDARG00000074742 6 0.913 - - - - - - 0.913 - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
56. CCDC74B CCDC74B 8 0.913 - - - - - - 0.913 - -
57. TMBIM1 TMBIM1 2 0.913 - - - - - - 0.913 - -
58. GPR116 GPR116 1 0.913 - - - - - - 0.913 - -
59. barx1 ENSDARG00000007407 344 0.913 - - - - - - 0.913 - - BARX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050522-28]
60. FCF1 ENSDARG00000102333 59 0.913 - - - - - - 0.913 - - FCF1 rRNA-processing protein [Source:ZFIN;Acc:ZDB-GENE-050417-67]
61. sst3 61 0.913 - - - - - - 0.913 - - somatostatin 3
62. zeb2b ENSDARG00000078416 23 0.913 - - - - - - 0.913 - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
63. aasdh ENSDARG00000022730 13 0.913 - - - - - - 0.913 - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
64. BX323994.1 ENSDARG00000078927 15 0.913 - - - - - - 0.913 - - uncharacterized LOC108190035 [Source:NCBI gene;Acc:108190035]
65. si:rp71-7l19.6 si:rp71-7l19.6 12 0.913 - - - - - - 0.913 - -
66. pax7a ENSDARG00000100398, ENSDARG00000111233 37 0.913 - - - - - - 0.913 - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
67. PDE9A ENSDARG00000060280 58 0.913 - - - - - - 0.913 - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
68. U4_1 U4_1 2 0.913 - - - - - - 0.913 - -
69. lars2 ENSDARG00000075337 31 0.913 - - - - - - 0.913 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
70. CABZ01067232.1 ENSDARG00000057408 1 0.913 - - - - - - 0.913 - - otolin-1-like [Source:NCBI gene;Acc:101886389]
71. KSR1_1 KSR1_1 1 0.913 - - - - - - 0.913 - -
72. cart2 ENSDARG00000045832, ENSDARG00000112535 13 0.913 - - - - - - 0.913 - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
73. OGDHL ENSDARG00000079249 0 0.913 - - - - - - 0.913 - - oxoglutarate dehydrogenase like [Source:ZFIN;Acc:ZDB-GENE-111201-4]
74. cd44a ENSDARG00000087863 4 0.913 - - - - - - 0.913 - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
75. mink1 ENSDARG00000035360, ENSDARG00000112785 13 0.913 - - - - - - 0.913 - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
76. zgc:163061 ENSDARG00000075538, ENSDARG00000076766 54 0.913 - - - - - - 0.913 - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
77. zgc:114041 ENSDARG00000052109 76 0.913 - - - - - - 0.913 - - zgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
78. FYB FYB 3 0.913 - - - - - - 0.913 - -
79. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 0.913 - - - - - - 0.913 - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
80. SIMC1 SIMC1 103 0.913 - - - - - - 0.913 - -
81. CAMSAP2 CAMSAP2 109 0.913 - - - - - - 0.913 - -
82. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 0.913 - - - - - - 0.913 - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
83. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 0.913 - - - - - - 0.913 - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
84. U1_20 U1_20 0 0.913 - - - - - - 0.913 - -
85. zgc:153345 ENSDARG00000055622 29 0.913 - - - - - - 0.913 - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
86. pappab ENSDARG00000059858 11 0.913 - - - - - - 0.913 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
87. tg ENSDARG00000020084 40 0.913 - - - - - - 0.913 - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
88. brinp3b ENSDARG00000075352 14 0.913 - - - - - - 0.913 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
89. si:dkey-150k17.2 si:dkey-150k17.2 40 0.913 - - - - - - 0.913 - -
90. CR450793.1 ENSDARG00000088927 6 0.913 - - - - - - 0.913 - - zinc finger protein 436-like [Source:NCBI gene;Acc:103911751]
91. si:ch211-229c8.4 ENSDARG00000056154 1 0.913 - - - - - - 0.913 - - si:ch211-229c8.4 [Source:ZFIN;Acc:ZDB-GENE-050419-129]
92. CR847847.1 CR847847.1 0 0.913 - - - - - - 0.913 - -
93. dusp3b ENSDARG00000060130 3 0.913 - - - - - - 0.913 - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
94. ei24 ENSDARG00000053840 78 0.913 - - - - - - 0.913 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
95. ENSDARG00000091766 ENSDARG00000091766 15 0.913 - - - - - - 0.913 - -
96. tmem179b ENSDARG00000069495 17 0.913 - - - - - - 0.913 - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
97. CABZ01077140.1 CABZ01077140.1 2 0.913 - - - - - - 0.913 - -
98. CLDN20 26 0.913 - - - - - - 0.913 - - claudin 20, transcript variant X2
99. zgc:110434 21 0.913 - - - - - - 0.913 - - zgc:110434
100. CABZ01078515.1 CABZ01078515.1 25 0.913 - - - - - - 0.913 - -

There are 648 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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