Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ier5

Gene Name Gene ID Reads Annotation
ier5 ENSDARG00000009881, ENSDARG00000111680 11432 immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]










Genes with expression patterns similar to ier5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
2. hnrpl 6412 4.019 0.922 - 0.733 - 0.857 0.754 0.753 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
3. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 3.215 0.867 0.785 - - - 0.752 0.811 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
4. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 3.183 0.913 0.775 - - - 0.724 - - 0.771 kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
5. ptenb ENSDARG00000056623 5783 3.146 - 0.763 - - 0.850 0.777 0.756 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
6. hmgb1b ENSDARG00000030479 10398 2.949 - 0.764 0.739 - - 0.714 0.732 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
7. atp2b4 5891 2.572 0.847 - - - - 0.821 0.904 - - ATPase, Ca++ transporting, plasma membrane 4
8. uba1 ENSDARG00000037559 11579 2.537 - 0.837 - - - 0.888 0.812 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
9. h2afva ENSDARG00000068820 16427 2.533 - - - - 0.898 0.795 0.840 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
10. ube2e1 ENSDARG00000116649 10656 2.502 0.900 0.870 - - - 0.732 - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
11. smarca5 ENSDARG00000052348 15433 2.491 0.906 - - - - 0.796 0.789 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
12. si:ch73-46j18.5 ENSDARG00000092467 6002 2.418 - 0.768 - - 0.845 - 0.805 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
13. kifc1 ENSDARG00000001558 6658 2.399 - - - 0.783 - 0.796 0.820 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
14. ck2a1 ck2a1 3749 2.391 0.938 - 0.748 - - - 0.705 - -
15. hmgb3a ENSDARG00000056725 15668 2.358 - 0.815 - - - 0.785 0.758 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
16. GABARAP GABARAP 8341 2.305 - 0.786 - - - - 0.729 - 0.790
17. ssbp4 ENSDARG00000056483 10196 2.302 - 0.771 - - - 0.814 0.717 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
18. pl10 pl10 10795 2.3 - 0.729 - - - 0.710 0.861 - -
19. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.271 - - 0.745 - - 0.725 0.801 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
20. rbb4l ENSDARG00000015208 5542 2.259 - - 0.810 - - 0.746 0.703 - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
21. ANKRD11 ENSDARG00000051886 10024 2.238 - 0.752 - - - 0.771 0.715 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
22. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.214 - - - - - 0.724 0.771 - 0.719 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
23. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 2.209 - 0.705 0.780 - - - - 0.724 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
24. rufy3 ENSDARG00000029692 3031 2.198 - - - - - 0.718 0.727 0.753 - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
25. ccdc47 ENSDARG00000054362 5970 2.196 0.758 0.715 - - - - 0.723 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
26. tgif1 ENSDARG00000059337 4020 2.193 - 0.732 0.744 - - - 0.717 - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
27. midn ENSDARG00000018524 7559 2.181 - 0.708 - - - 0.741 0.732 - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
28. srsf11 ENSDARG00000098574 12801 1.832 0.931 - - - - - 0.901 - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
29. lama5 ENSDARG00000058543 2782 1.757 0.897 0.860 - - - - - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
30. kif22 ENSDARG00000102624 3694 1.737 - - - - - 0.867 0.870 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
31. pbx4 ENSDARG00000052150 35676 1.719 - 0.847 - - - - 0.872 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
32. myeov2 3351 1.701 0.904 - - - - - 0.797 - - myeloma overexpressed 2
33. si:ch211-166a6.5 ENSDARG00000079745 11111 1.693 0.826 0.867 - - - - - - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
34. reep3 reep3 2536 1.693 0.923 0.770 - - - - - - -
35. tead3a ENSDARG00000074321 2240 1.692 0.917 - - - - - 0.775 - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
36. rbm8a ENSDARG00000016516 8789 1.688 0.897 - - - - - 0.791 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
37. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.68 0.932 - - - - - 0.748 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
38. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.675 0.904 - - - - - 0.771 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
39. pgrmc1 ENSDARG00000054172 5423 1.671 0.875 0.796 - - - - - - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
40. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.671 0.919 - - - - 0.752 - - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
41. arpc1a ENSDARG00000008383 7353 1.669 0.795 0.874 - - - - - - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
42. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.662 0.898 0.764 - - - - - - - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
43. smarca4 smarca4 9726 1.661 - - - - - 0.799 0.862 - -
44. atf4b1 atf4b1 17316 1.655 0.734 - - - 0.921 - - - -
45. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.652 0.876 - - - - 0.776 - - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
46. xpot ENSDARG00000099652 3026 1.651 0.935 - - - - - - - 0.716 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
47. rbb4 rbb4 15541 1.65 - - 0.822 - - - 0.828 - -
48. ube2i ube2i 13024 1.649 0.861 - - - - - 0.788 - -
49. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.647 - - - - - 0.783 - - 0.864 heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
50. mier1b ENSDARG00000001447 1680 1.647 0.898 - - - - - 0.749 - - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
51. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.645 0.935 0.710 - - - - - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
52. ppig ENSDARG00000044431 3427 1.645 0.915 - 0.730 - - - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
53. h2afvb ENSDARG00000116491 35692 1.638 - 0.800 - - - 0.838 - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
54. map3k7 ENSDARG00000020469 2845 1.635 - - - - - - 0.858 - 0.777 mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
55. cplx4b ENSDARG00000059486 3192 1.632 0.853 0.779 - - - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
56. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.631 - - - - - 0.818 0.813 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
57. hdac1 ENSDARG00000015427 19804 1.625 - - 0.741 - - 0.884 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
58. zfand5a ENSDARG00000018898 3308 1.625 - 0.856 - - - - - - 0.769 zinc finger, AN1-type domain 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1979]
59. smc1al ENSDARG00000058203 8838 1.624 - - - - - 0.834 0.790 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
60. lypla2 ENSDARG00000053656 8971 1.62 - - - - - 0.862 0.758 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
61. si:dkey-42i9.4 ENSDARG00000008049 4752 1.619 0.900 - - - - - 0.719 - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
62. brd3b ENSDARG00000100129 6387 1.619 - - - - - - 0.780 - 0.839 bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
63. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.616 - - 0.831 - - 0.785 - - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
64. mapk3 ENSDARG00000070573 6842 1.615 0.850 0.765 - - - - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
65. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.613 0.822 - - - - - 0.791 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
66. ruvbl1 ENSDARG00000002591 2381 1.611 - - - 0.802 - - - - 0.809 RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
67. lmnb2 ENSDARG00000101624 11304 1.609 0.799 - - - - 0.810 - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
68. srrm1 ENSDARG00000001244 4972 1.605 - 0.805 - - - 0.800 - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
69. anapc16 ENSDARG00000013822 5857 1.605 - - - - - - 0.875 - 0.730 anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
70. cx43.4 ENSDARG00000007099 16369 1.605 - - - - 0.824 0.781 - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
71. mark3 mark3 1375 1.602 0.889 - - - - - - - 0.713
72. atp5mf ENSDARG00000037867 11052 1.601 0.862 0.739 - - - - - - - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
73. lsm4 ENSDARG00000023852 6083 1.601 0.899 - - - - 0.702 - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
74. spry4 ENSDARG00000068732 2091 1.598 0.895 - - - - 0.703 - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
75. sdc4 ENSDARG00000059906 10105 1.595 - 0.834 - - - - 0.761 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
76. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.595 - - - - - 0.755 - - 0.840 chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
77. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.594 - - - - 0.860 0.734 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
78. whsc1l1 8544 1.591 - - - - - 0.812 0.779 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
79. smarcd1 ENSDARG00000019004 6028 1.59 - - - - - 0.853 0.737 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
80. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.589 - 0.800 - - - 0.789 - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
81. cnih4 ENSDARG00000087759 3937 1.584 0.824 0.760 - - - - - - - cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
82. kpnb3 ENSDARG00000040245 7967 1.582 - - - 0.774 - - 0.808 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
83. cand1 ENSDARG00000017841 8164 1.581 - 0.822 - - - 0.759 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
84. elof1 ENSDARG00000099453 6176 1.581 - - 0.767 - - - 0.814 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
85. tmem167a ENSDARG00000035914 3319 1.577 - 0.745 - - - - 0.832 - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
86. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.576 - - - - - 0.761 0.815 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
87. kif15 ENSDARG00000012073 1936 1.576 - - - - - 0.739 0.837 - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
88. supt6h ENSDARG00000006524 3221 1.576 - - - - - 0.762 0.814 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
89. lmnb1 ENSDARG00000044299 9817 1.575 - - - - - 0.706 0.869 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
90. nova1 ENSDARG00000020178 4129 1.573 - - - - - 0.760 - - 0.813 neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
91. nucks1b ENSDARG00000012777 4468 1.573 - - - - - - 0.804 - 0.769 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
92. vps35 ENSDARG00000008224 13245 1.57 - - - - - - 0.777 - 0.793 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
93. srsf4 ENSDARG00000105293 9657 1.569 - - - - - 0.777 0.792 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
94. tdg tdg 3269 1.568 - - - - - 0.733 0.835 - -
95. calm1a ENSDARG00000021811 4791 1.567 - - - - - 0.815 0.752 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
96. ctbp2 ctbp2 3255 1.567 0.831 - - - - - - - 0.736
97. cse1l ENSDARG00000006963 3261 1.566 - - 0.711 - - - - - 0.855 CSE1 chromosome segregation 1-like (yeast) [Source:ZFIN;Acc:ZDB-GENE-990603-1]
98. fam60al 2846 1.565 - - - - - 0.743 0.822 - - family with sequence similarity 60, member A, like
99. gna11b ENSDARG00000053326 5118 1.562 - - - - - 0.832 0.730 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
100. MATR3 MATR3 3962 1.56 - - 0.753 - - - 0.807 - -

There are 1315 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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