Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for reep3

Gene Name Gene ID Reads Annotation
reep3 reep3 2536










Genes with expression patterns similar to reep3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. reep3 reep3 2536 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. arpc1a ENSDARG00000008383 7353 3.049 0.846 0.725 - 0.712 - - 0.766 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
3. GCA GCA 5211 2.608 0.931 - - - - - 0.856 - 0.821
4. myeov2 3351 2.58 0.979 - - - - - 0.771 - 0.830 myeloma overexpressed 2
5. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 2.543 0.944 - - - - 0.749 - - 0.850 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
6. ssr2 ENSDARG00000005230 31940 2.528 0.810 - - - - - 0.801 - 0.917 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
7. si:ch73-234b20.5 ENSDARG00000086996, ENSDARG00000109882, ENSDARG00000111886 2759 2.525 0.959 - - - - 0.758 0.808 - - si:ch73-234b20.5 [Source:ZFIN;Acc:ZDB-GENE-041008-183]
8. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 2.518 0.975 0.739 - - - - - - 0.804 kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
9. MTMR4 1374 2.511 0.985 0.754 - - - - 0.772 - - myotubularin related protein 4, transcript variant X3
10. sqstm1 ENSDARG00000075014 2392 2.484 - - 0.750 - - - 0.805 - 0.929 sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]
11. col4a6 ENSDARG00000052061 8636 2.407 0.834 - - - - - 0.802 - 0.771 collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
12. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 2.359 0.856 - - - - 0.765 0.738 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
13. cdc20 ENSDARG00000100741 3264 2.332 - 0.704 - - - - 0.807 - 0.821 cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
14. KRTCAP2 ENSDARG00000070386 10103 2.325 - - - 0.710 - - 0.833 - 0.782 keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
15. slc38a7 ENSDARG00000012002 2219 2.262 0.840 0.716 - - - - 0.706 - - solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
16. aldh4a1 ENSDARG00000038207 4639 2.218 0.724 - - - - 0.772 0.722 - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
17. aacs ENSDARG00000012468 1138 1.9 0.987 - - - - - - - 0.913 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
18. mark3 mark3 1375 1.897 0.980 - - - - - - - 0.917
19. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.891 0.974 - - - - - - - 0.917 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
20. xpot ENSDARG00000099652 3026 1.889 0.981 - - - - - - - 0.908 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
21. tead3a ENSDARG00000074321 2240 1.867 0.985 - - - - - - - 0.882 TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
22. snai2 ENSDARG00000040046 2415 1.861 0.979 - - - - - - - 0.882 snail family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030326-6]
23. npepl1 ENSDARG00000012871 3064 1.839 0.969 - - - - - 0.870 - - aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-177]
24. sdr16c5a ENSDARG00000016233 2413 1.793 0.939 - - - - - - - 0.854 short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
25. col6a1 ENSDARG00000074908 2339 1.792 0.980 - - - - - - - 0.812 collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
26. pgrmc1 ENSDARG00000054172 5423 1.76 0.944 - - - - - 0.816 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
27. mcm2 ENSDARG00000102798 8148 1.748 0.962 - - - - - 0.786 - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
28. bcl2l1 ENSDARG00000008434 1956 1.742 - - - - - - 0.859 - 0.883 bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
29. agpat4 ENSDARG00000069044 4487 1.741 0.974 - - - - - 0.767 - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
30. egfra ENSDARG00000013847 2912 1.738 0.968 - - - - - 0.770 - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
31. itga6b ENSDARG00000069946, ENSDARG00000110478 1126 1.732 0.982 - - - - - 0.750 - - integrin, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-050320-5]
32. ptbp1a ENSDARG00000019362 6290 1.731 - - - 0.803 - - 0.928 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
33. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.73 - - - - - - 0.791 - 0.939 furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
34. aim1a 2981 1.729 0.962 - - - - - 0.767 - - crystallin beta-gamma domain containing 1a, transcript variant X1
35. ywhabl ENSDARG00000040287 39045 1.728 0.842 - - - - - 0.886 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
36. sult6b1 ENSDARG00000086826 2070 1.725 0.974 - - - - 0.751 - - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
37. waslb ENSDARG00000006283 2160 1.721 - - - - - - 0.804 - 0.917 Wiskott-Aldrich syndrome-like b [Source:ZFIN;Acc:ZDB-GENE-040426-718]
38. capn5a ENSDARG00000103317 1923 1.717 0.959 - - - - - 0.758 - - calpain 5a [Source:ZFIN;Acc:ZDB-GENE-061103-214]
39. FAM210A FAM210A 437 1.715 0.984 - - - - 0.731 - - -
40. pon1 ENSDARG00000032496 1375 1.715 0.977 - - - - - 0.738 - - paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
41. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.706 0.962 - - - - - 0.744 - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
42. CLDN23 CLDN23 2002 1.698 0.908 - - - - - 0.790 - -
43. gfpt2 ENSDARG00000044094 2503 1.698 0.885 - - - - - 0.813 - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
44. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.696 0.912 - - - - - 0.784 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
45. ptpmt1 ENSDARG00000013860 772 1.695 - - - - - - - 0.770 0.925 protein tyrosine phosphatase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-070112-272]
46. tmem258 ENSDARG00000078785 9578 1.693 0.872 - - - - - 0.821 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
47. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.693 0.923 0.770 - - - - - - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
48. ctbp2 ctbp2 3255 1.692 0.920 - - - - - - - 0.772
49. chmp2bb ENSDARG00000002190 4629 1.69 0.971 - - - - - 0.719 - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
50. txnrd1 11401 1.687 0.956 - - - - - 0.731 - - thioredoxin reductase 1
51. wdtc1 ENSDARG00000059760 1218 1.685 0.985 - 0.700 - - - - - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
52. limk2 ENSDARG00000005104 2598 1.68 - - - - - 0.706 - - 0.974 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
53. csad ENSDARG00000026348 1461 1.679 0.942 - - - - - 0.737 - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
54. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.678 - - - - - - 0.757 - 0.921 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
55. vasp vasp 3925 1.674 - - - - - - 0.875 - 0.799
56. ptbp3 ENSDARG00000043757 6760 1.671 0.921 - - - - - 0.750 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
57. kidins220b ENSDARG00000017338 1937 1.665 - - 0.835 - - - - - 0.830 kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
58. ptgs2a ENSDARG00000004539 1207 1.664 - - - - - - 0.765 - 0.899 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
59. gpx4b ENSDARG00000076836 8085 1.662 0.929 - - - - - 0.733 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
60. snx11 ENSDARG00000052522 1030 1.662 0.938 - - - - - 0.724 - - sorting nexin 11 [Source:ZFIN;Acc:ZDB-GENE-041111-253]
61. rcor1 ENSDARG00000031434 2733 1.656 0.943 - - - - - 0.713 - - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
62. tram2 ENSDARG00000030092 1906 1.652 0.918 - - - - - - - 0.734 translocation associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2024]
63. FAM126B_1 FAM126B_1 730 1.652 0.950 - - - - - 0.702 - -
64. fam60a 825 1.647 - - - - - - 0.730 - 0.917 family with sequence similarity 60, member A
65. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.643 - - - - - - 0.758 - 0.885 nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
66. adipor1b ENSDARG00000042717 1348 1.639 - 0.761 - - - - - - 0.878 adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
67. cyb5a ENSDARG00000098589 9430 1.637 - 0.715 - - - - 0.922 - - cytochrome b5 type A (microsomal) [Source:ZFIN;Acc:ZDB-GENE-040426-2148]
68. si:dkey-228b2.5 1760 1.636 0.924 0.712 - - - - - - - si:dkey-228b2.5
69. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.635 0.926 - - - - - 0.709 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
70. ptplb ptplb 6135 1.629 - - - - - 0.817 0.812 - -
71. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.628 0.855 - - - - - 0.773 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
72. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.627 - - - - - - 0.759 - 0.868 solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
73. capn2a ENSDARG00000091699 5924 1.624 - - - - - - 0.855 - 0.769 calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
74. ywhaz ENSDARG00000032575 15257 1.621 - - - - - - 0.890 - 0.731 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
75. atp2b4 5891 1.617 0.906 - - - - - 0.711 - - ATPase, Ca++ transporting, plasma membrane 4
76. tpst1 ENSDARG00000073872 2490 1.614 - - - - - 0.703 0.911 - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
77. si:ch211-166a6.5 ENSDARG00000079745 11111 1.609 0.831 0.778 - - - - - - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
78. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.609 - - - - - - 0.765 - 0.844 DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
79. CABZ01013938.1 CABZ01013938.1 4497 1.605 - - - - - 0.755 0.850 - -
80. pcbd1 ENSDARG00000031981 3373 1.598 - - - - - 0.769 0.829 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
81. prkar1aa ENSDARG00000076128 6565 1.598 - 0.723 - - - - 0.875 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
82. llgl2 ENSDARG00000023920 2617 1.597 - - - - - 0.757 0.840 - - lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
83. AGAP3 ENSDARG00000087822 4128 1.593 - 0.790 - - - - 0.803 - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
84. gnmt ENSDARG00000006840 2422 1.585 - - - - - - 0.730 - 0.855 glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
85. mcl1b ENSDARG00000008363 3097 1.583 - 0.738 - - - - 0.845 - - MCL1, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-030825-1]
86. vtnb ENSDARG00000053831 2364 1.58 0.863 - - - - - 0.717 - - vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
87. pdcd6ip ENSDARG00000025269 2522 1.58 - - 0.790 - - - 0.790 - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
88. nutf2l ENSDARG00000014499 3927 1.579 - - - 0.716 - - - - 0.863 nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
89. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.579 0.857 - - - - 0.722 - - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
90. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 1.576 - - - - - 0.780 0.796 - - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
91. LIMD2 ENSDARG00000078092 3414 1.567 - - - - - 0.797 0.770 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
92. ugt1b4 ENSDARG00000097024 1848 1.564 - - - - - 0.731 0.833 - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
93. gstp1 ENSDARG00000104068 12698 1.56 0.802 0.758 - - - - - - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
94. pfn2 ENSDARG00000003952 26209 1.557 0.856 - - - - - 0.701 - - profilin 2 [Source:ZFIN;Acc:ZDB-GENE-040115-4]
95. commd7 ENSDARG00000036784, ENSDARG00000111683 997 1.555 - - - 0.832 - - 0.723 - - COMM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040801-96]
96. tax1bp1b ENSDARG00000056856 4526 1.555 - - - - - 0.728 0.827 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
97. ap2b1 ENSDARG00000035152 2912 1.551 - - - - - - 0.723 - 0.828 adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
98. pgam1a ENSDARG00000005423 3986 1.549 - - - - - 0.741 - - 0.808 phosphoglycerate mutase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1827]
99. atp2b1a ENSDARG00000012684 4673 1.545 - - - - - 0.718 0.827 - - ATPase plasma membrane Ca2+ transporting 1a [Source:ZFIN;Acc:ZDB-GENE-030925-29]
100. ubald1b ENSDARG00000020976 1162 1.544 - - - - - - 0.797 0.747 - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]

There are 1547 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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