Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hmx4

Gene Name Gene ID Reads Annotation
hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]










Genes with expression patterns similar to hmx4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
2. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 4.178 - - 0.856 0.921 0.769 - - 0.711 0.921 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
3. fabp11b ENSDARG00000002311 354 3.203 - - 0.885 0.750 0.769 - - - 0.799 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
4. prox2 ENSDARG00000041952, ENSDARG00000117137 112 3.138 - - 0.923 0.738 0.706 - - - 0.771 prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
5. cps1 ENSDARG00000020028 67 3.089 - - 0.746 0.758 0.798 - - - 0.787 carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
6. nrl ENSDARG00000100466 41 3.08 - - 0.775 0.773 0.733 - - - 0.799 neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
7. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 3.055 - - 0.787 0.759 0.737 - - - 0.772 lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
8. cryba2a ENSDARG00000030349 1342 3.013 - - 0.810 0.748 0.726 - - - 0.729 crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
9. foxg1b ENSDARG00000032705 354 2.635 - - 0.880 0.887 - - - - 0.868 forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
10. crygn2 ENSDARG00000030411 2551 2.512 0.916 - 0.818 - - - - - 0.778 crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
11. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 2.488 - - 0.895 0.849 0.744 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
12. ahr1b ENSDARG00000023537 44 2.482 - - 0.955 - 0.760 - - - 0.767 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
13. rx2 ENSDARG00000040321 112 2.471 - - 0.897 0.866 - - - - 0.708 retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
14. rorb ENSDARG00000033498 544 2.459 - - 0.864 0.774 - - - - 0.821 RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
15. vsx2 ENSDARG00000005574 102 2.447 - - 0.904 0.812 - - - - 0.731 visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
16. cx44.1 cx44.1 799 2.435 - - 0.813 0.817 - - - - 0.805
17. prdm1b ENSDARG00000098925 440 2.431 - - 0.785 0.880 - - - - 0.766 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
18. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 2.412 - - 0.807 0.793 - - - - 0.812 moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
19. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 2.389 0.839 - - - 0.706 0.844 - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
20. crygmx ENSDARG00000053862 482 2.382 - - 0.805 0.783 - - - - 0.794 crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
21. pmelb ENSDARG00000033760 206 2.375 - - 0.864 - 0.728 - - - 0.783 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
22. mipa ENSDARG00000037285, ENSDARG00000116133 507 2.362 - - 0.828 0.750 - - - - 0.784 major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
23. fabp7a ENSDARG00000007697 5211 2.336 - - 0.849 0.763 - - - - 0.724 fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
24. si:ch211-274p24.3 si:ch211-274p24.3 72 2.324 - - 0.839 0.775 0.710 - - - -
25. cryba1l1 ENSDARG00000032929 1868 2.321 - - 0.830 0.758 - - - - 0.733 crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
26. mipb ENSDARG00000013963 753 2.293 - - 0.731 0.786 - - - - 0.776 major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
27. CU929052.1 CU929052.1 642 2.29 - - 0.864 0.704 0.722 - - - -
28. si:ch211-145g9.7 32 2.267 - - 0.749 - 0.758 - - - 0.760 si:ch211-145g9.7, transcript variant X1
29. cx23 ENSDARG00000054150 115 2.257 - - 0.724 0.780 - - - - 0.753 connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
30. lim2.3 ENSDARG00000037402 302 2.218 - - 0.802 0.704 0.712 - - - - lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
31. CCDC88A_1 CCDC88A_1 12 1.879 - - - - - 1.000 - - 0.879
32. EPHB1 ENSDARG00000076757 20 1.839 0.839 - - - - 1.000 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
33. CHD6 ENSDARG00000017244 219 1.774 0.774 - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
34. si:dkey-4e4.1 ENSDARG00000096026, ENSDARG00000109251 48 1.761 - - - - - 1.000 - 0.761 - si:dkey-4e4.1 [Source:ZFIN;Acc:ZDB-GENE-110914-73]
35. fasn ENSDARG00000087657 99 1.719 - - 0.719 - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
36. PGBD4_4 PGBD4_4 15 1.717 0.717 - - - - 1.000 - - -
37. rx1 ENSDARG00000071684 247 1.717 - - 0.887 - - - - - 0.830 retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
38. EPHB6 ENSDARG00000057729 223 1.678 - - 0.879 0.799 - - - - - eph receptor B6 [Source:ZFIN;Acc:ZDB-GENE-100922-51]
39. cyp26b1 ENSDARG00000077121 1364 1.675 - - - 0.854 - - - 0.821 - cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
40. MLLT4 MLLT4 67 1.666 0.839 - - - - - - - 0.827
41. scrt1a ENSDARG00000100821 2687 1.646 - - - 0.874 - - - 0.772 - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
42. atoh7 ENSDARG00000069552 254 1.644 - - - 0.819 - - - - 0.825 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
43. SP5 SP5 8 1.638 - - - 0.896 - - - 0.742 -
44. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.634 - - - - - 0.844 - - 0.790 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
45. cryba1b ENSDARG00000053875 3256 1.614 - - 0.843 - - - - - 0.771 crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
46. cyp26c1 ENSDARG00000056029 1426 1.61 - - - 0.909 - - - 0.701 - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
47. ptf1a ENSDARG00000014479 349 1.609 0.839 - - - - - - - 0.770 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
48. grifin ENSDARG00000033382 141 1.609 - - 0.845 - - - - - 0.764 galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
49. CLDN22 CLDN22 114 1.604 - - - 0.738 - - - 0.866 -
50. lim2.4 ENSDARG00000015445 791 1.602 - - 0.838 - - - - - 0.764 lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
51. zgc:110053 zgc:110053 69 1.599 - - 0.829 - - - - - 0.770
52. si:ch211-152c2.3 ENSDARG00000045898 3448 1.587 - - 0.852 - 0.735 - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
53. dand5 ENSDARG00000036471 8 1.578 0.839 - - - - - - - 0.739 DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
54. zgc:165525 zgc:165525 207 1.573 - - 0.847 - - - - - 0.726
55. pou6f2 ENSDARG00000086362 135 1.572 - - - 0.774 - - - - 0.798 POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71]
56. capn3a ENSDARG00000041864 89 1.57 - - - 0.794 - - - - 0.776 calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
57. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.569 - - - - - 0.804 - - 0.765 shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
58. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1.563 - - 0.825 0.738 - - - - - gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
59. myt1la ENSDARG00000008209 120 1.562 - - - 0.795 - - - - 0.767 myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
60. crybb1l1 ENSDARG00000007576 1020 1.562 - - 0.804 - - - - - 0.758 crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
61. cryba2b ENSDARG00000041925 4329 1.562 - - 0.770 0.792 - - - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
62. pitx3 ENSDARG00000070069 363 1.552 - - 0.769 - - - - - 0.783 paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
63. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.545 0.839 - - - - - - 0.706 - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
64. zgc:86723 zgc:86723 299 1.542 - - 0.753 - - - - - 0.789
65. CR382327.1 ENSDARG00000088739 56 1.54 - - - 0.739 - - - 0.801 -
66. crybb1 ENSDARG00000068507 2255 1.535 - - 0.831 - 0.704 - - - - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
67. crybb1l2 ENSDARG00000016793 723 1.529 - - 0.793 0.736 - - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
68. ENSDARG00000092910 ENSDARG00000092910 44 1.525 0.717 - - - - 0.808 - - -
69. cryba4 ENSDARG00000024548 111 1.518 - - 0.720 - - - - - 0.798 crystallin, beta A4 [Source:ZFIN;Acc:ZDB-GENE-050522-143]
70. crygm2d8 ENSDARG00000116164 698 1.517 - - 0.726 - - - - - 0.791 crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
71. crybb1l3 ENSDARG00000007655 33 1.512 - - 0.715 - - - - - 0.797 crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
72. foxn4 ENSDARG00000010591 2332 1.508 - - 0.749 - - - - - 0.759 forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
73. six3b ENSDARG00000054879 2416 1.508 - - - 0.709 - - - - 0.799 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
74. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 1.503 - - 0.787 - - - - - 0.716 eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
75. crygm2d10 ENSDARG00000087765 358 1.498 - - 0.784 - - - - - 0.714 crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
76. si:ch211-80h18.1 ENSDARG00000078522 1941 1.492 - - - 0.737 - - - 0.755 - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
77. stm ENSDARG00000035694 1567 1.487 - - - 0.777 - - - 0.710 - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
78. eomesa ENSDARG00000006640 257 1.485 - - - 0.777 0.708 - - - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
79. cryba1l2 ENSDARG00000014803 47 1.484 - - - 0.711 - - - - 0.773 crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
80. crygm2d6 ENSDARG00000073874 38 1.474 - - 0.709 - - - - - 0.765 crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
81. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 1.469 - - 0.755 - - - - - 0.714 crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
82. rlbp1a ENSDARG00000012504 111 1.46 - - 0.703 - - - - - 0.757 retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
83. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.459 - - - 0.750 - - - - 0.709 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
84. FOXL2 239 1.457 - - - 0.709 - - - 0.748 - forkhead box L2, transcript variant X1
85. COL9A1 COL9A1 264 1.453 - - - 0.706 - - - 0.747 -
86. si:ch211-212n6.16 si:ch211-212n6.16 314 1.431 - - 0.728 - - - - - 0.703
87. amer2 ENSDARG00000075222 594 1.429 - - - 0.729 - - - - 0.700 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
88. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.416 0.713 - - - - - - - 0.703 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
89. syt11b ENSDARG00000056105 578 1.416 - - - 0.704 - - - - 0.712 synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
90. sox2 ENSDARG00000070913 2763 1.414 - - 0.712 0.702 - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
91. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - 1.000 - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
92. TMBIM1 TMBIM1 2 1 - - - - - 1.000 - - -
93. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - - - - - 1.000 - - -
94. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - - 1.000 - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
95. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - 1.000 - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
96. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1 - - - - - 1.000 - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
97. si:dkey-57l19.1 ENSDARG00000098143 1 1 - - - - - 1.000 - - - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
98. gng8 ENSDARG00000042970 117 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
99. PRKD2_1 PRKD2_1 1 1 - - - - - 1.000 - - -
100. ppm1na ENSDARG00000010231 3 1 - - - - - 1.000 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]

There are 735 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA