Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for fxn

Gene Name Gene ID Reads Annotation
fxn ENSDARG00000074356 524 frataxin [Source:ZFIN;Acc:ZDB-GENE-070209-286]










Genes with expression patterns similar to fxn

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fxn ENSDARG00000074356 524 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 frataxin [Source:ZFIN;Acc:ZDB-GENE-070209-286]
2. RPTOR ENSDARG00000098726, ENSDARG00000116019 420 1.622 - 0.772 - - - - 0.850 - - regulatory associated protein of MTOR, complex 1 [Source:ZFIN;Acc:ZDB-GENE-130530-685]
3. tmem53 ENSDARG00000038789 411 1.616 - 0.817 - - - - 0.799 - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
4. CDPF1 ENSDARG00000095705 553 1.556 - - - 0.745 - - 0.811 - - cysteine rich DPF motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33710]
5. mylk4b ENSDARG00000055412 181 1.533 0.746 0.787 - - - - - - - myosin light chain kinase family, member 4b [Source:ZFIN;Acc:ZDB-GENE-041001-128]
6. mrps18c ENSDARG00000069624, ENSDARG00000114200 983 1.531 - 0.784 - - - - 0.747 - - mitochondrial ribosomal protein S18C [Source:ZFIN;Acc:ZDB-GENE-060503-609]
7. ctnnal1 ENSDARG00000018162 747 1.525 - - - - - 0.800 0.725 - - catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
8. hk2 ENSDARG00000101482, ENSDARG00000116757 92 1.516 - 0.800 - 0.716 - - - - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
9. GPT_1 GPT_1 68 1.507 0.725 0.782 - - - - - - -
10. si:ch211-242b18.1 ENSDARG00000054723 2929 1.503 0.755 0.748 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
11. klhl41a ENSDARG00000068888 1034 1.486 - 0.783 - - - - 0.703 - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
12. zgc:111974 zgc:111974 1386 1.469 - - - 0.715 - - 0.754 - -
13. cryzl1 ENSDARG00000026902 401 1.459 0.737 - - - - - 0.722 - - crystallin, zeta (quinone reductase)-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-378]
14. rnmtl1b 116 1.456 0.707 - - - - 0.749 - - - RNA methyltransferase like 1b
15. bag6l ENSDARG00000077531 1027 1.454 - - - - - 0.718 0.736 - - BCL2 associated athanogene 6, like [Source:ZFIN;Acc:ZDB-GENE-060307-2]
16. ankib1b ENSDARG00000076829 677 1.45 - 0.715 - - - - 0.735 - - ankyrin repeat and IBR domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-100920-6]
17. opn4b ENSDARG00000053929 143 1.445 0.712 0.733 - - - - - - - opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]
18. rad18 ENSDARG00000027938 574 1.444 - - - 0.738 - 0.706 - - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
19. lrp11 ENSDARG00000034076 313 1.433 - 0.709 - 0.724 - - - - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
20. gemin2 ENSDARG00000015638 886 1.43 - 0.711 - - - - 0.719 - - gem (nuclear organelle) associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3756]
21. PRIM2 ENSDARG00000052721 825 0.945 - - - - - - 0.945 - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
22. urod ENSDARG00000006818 856 0.905 - 0.905 - - - - - - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
23. nfe2 ENSDARG00000020606 224 0.901 - 0.901 - - - - - - - nuclear factor, erythroid 2 [Source:ZFIN;Acc:ZDB-GENE-030124-1]
24. zgc:66350 zgc:66350 122 0.9 - 0.900 - - - - - - -
25. si:dkey-285e18.8 si:dkey-285e18.8 170 0.899 - 0.899 - - - - - - -
26. htatip2 ENSDARG00000028386 245 0.881 0.881 - - - - - - - - HIV-1 Tat interactive protein 2 [Source:ZFIN;Acc:ZDB-GENE-001219-1]
27. foxf2a ENSDARG00000017195 345 0.873 - 0.873 - - - - - - - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
28. taok2b_1 ENSDARG00000100620 2082 0.871 - 0.871 - - - - - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
29. prune ENSDARG00000076246, ENSDARG00000115232 875 0.869 - - - - - - 0.869 - - prune exopolyphosphatase [Source:ZFIN;Acc:ZDB-GENE-100609-1]
30. trmt112 ENSDARG00000071878, ENSDARG00000109878 930 0.866 - - - - - - 0.866 - - tRNA methyltransferase 11-2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-30]
31. pcdh7b ENSDARG00000060610 400 0.866 - 0.866 - - - - - - - protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]
32. HNRNPH3 ENSDARG00000039466, ENSDARG00000113164, ENSDARG00000114248 551 0.866 - - - - - 0.866 - - - heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878]
33. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 0.866 - 0.866 - - - - - - - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
34. ATP6AP1L_1 ATP6AP1L_1 508 0.865 - - - - - - 0.865 - -
35. u2af2a ENSDARG00000012505 2920 0.865 - - - - - - 0.865 - - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
36. crebbpa ENSDARG00000104609 1739 0.862 - - - - - - 0.862 - - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
37. HBQ1 HBQ1 413 0.859 - 0.859 - - - - - - -
38. prkcbp1l ENSDARG00000011932 2714 0.857 - - - - - - 0.857 - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
39. scamp3 ENSDARG00000016765 540 0.855 - - - - - - 0.855 - - secretory carrier membrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-33]
40. SLC2A4RG SLC2A4RG 47 0.855 - 0.855 - - - - - - -
41. agk ENSDARG00000009837, ENSDARG00000113514 811 0.854 - 0.854 - - - - - - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
42. NCOA7 NCOA7 658 0.852 - 0.852 - - - - - - -
43. gpsm1b ENSDARG00000054874 1308 0.849 - 0.849 - - - - - - - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
44. sim1a ENSDARG00000023316 190 0.848 - 0.848 - - - - - - - SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]
45. TULP1_1 TULP1_1 260 0.847 0.847 - - - - - - - -
46. TSSC4 ENSDARG00000036144 1994 0.847 - - - - - - 0.847 - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
47. ppox ENSDARG00000102167 929 0.846 - 0.846 - - - - - - - protoporphyrinogen oxidase [Source:ZFIN;Acc:ZDB-GENE-051120-90]
48. scaf4a ENSDARG00000077093 2408 0.845 - - - - - - 0.845 - - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
49. FP243385.1 FP243385.1 29 0.843 - 0.843 - - - - - - -
50. SGOL1 450 0.843 0.843 - - - - - - - - shugoshin-like 1 (S. pombe), transcript variant X1
51. vangl2 ENSDARG00000027397 2418 0.841 - - - - - - 0.841 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
52. atg9a ENSDARG00000044551 179 0.84 - 0.840 - - - - - - - ATG9 autophagy related 9 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070209-65]
53. si:ch211-113e8.9 ENSDARG00000095065 33 0.84 - 0.840 - - - - - - - si:ch211-113e8.9 [Source:ZFIN;Acc:ZDB-GENE-090313-14]
54. srfbp1 ENSDARG00000075323 2262 0.839 - - - - - - 0.839 - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
55. ascc1 ENSDARG00000077760 618 0.838 - - - - - 0.838 - - - activating signal cointegrator 1 complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-80]
56. DBNDD2 DBNDD2 216 0.835 0.835 - - - - - - - -
57. NACC2 160 0.834 - 0.834 - - - - - - - NACC family member 2
58. itpk1 itpk1 425 0.831 - - - - - - 0.831 - -
59. st3gal4 ENSDARG00000041006 636 0.831 - 0.831 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
60. tank ENSDARG00000067723 225 0.829 - 0.829 - - - - - - - TRAF family member-associated NFKB activator [Source:ZFIN;Acc:ZDB-GENE-060929-308]
61. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 0.829 - - - - - - 0.829 - - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
62. EPHB3 2215 0.828 - - - - - - 0.828 - - EPH receptor B3
63. PLEKHO2 ENSDARG00000016774 454 0.826 - - - - - 0.826 - - - pleckstrin homology domain containing, family O member 2 [Source:ZFIN;Acc:ZDB-GENE-120406-4]
64. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.825 - 0.825 - - - - - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
65. zgc:110540 ENSDARG00000054929 2154 0.825 - - - - - - 0.825 - - zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
66. CABZ01016567.1 CABZ01016567.1 73 0.824 - 0.824 - - - - - - -
67. ENSDARG00000077141 ENSDARG00000077141 227 0.823 - 0.823 - - - - - - -
68. ccdc28b ENSDARG00000011222 528 0.822 - 0.822 - - - - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
69. gpr133 gpr133 83 0.821 0.821 - - - - - - - -
70. rfc5 ENSDARG00000035634 974 0.821 - - - - - - 0.821 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
71. tmc1 23 0.821 0.821 - - - - - - - - transmembrane channel-like 1, transcript variant X1
72. PLXNB2 PLXNB2 99 0.821 - 0.821 - - - - - - -
73. si:dkey-21c1.1 ENSDARG00000096725 65 0.821 - 0.821 - - - - - - - si:dkey-21c1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-45]
74. MIS18BP1 ENSDARG00000042563 229 0.821 - 0.821 - - - - - - - MIS18 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-151]
75. whsc1 1701 0.82 - - - - - - 0.820 - - Wolf-Hirschhorn syndrome candidate 1
76. spry2 ENSDARG00000078308 1200 0.819 - 0.819 - - - - - - - sprouty RTK signaling antagonist 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7038]
77. tnnt1 ENSDARG00000037954 104 0.819 - - - - - 0.819 - - - troponin T type 1 (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-080723-27]
78. phf17 phf17 790 0.819 - - - - - - 0.819 - -
79. has2 ENSDARG00000036987 349 0.819 - 0.819 - - - - - - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
80. si:dkey-117n7.2 ENSDARG00000093135 40 0.818 - 0.818 - - - - - - - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
81. CABZ01044943.1 CABZ01044943.1 309 0.818 - 0.818 - - - - - - -
82. rac3a ENSDARG00000090062 394 0.817 - 0.817 - - - - - - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
83. C20H1orf112 C20H1orf112 316 0.816 - 0.816 - - - - - - -
84. cbsa ENSDARG00000053500, ENSDARG00000112676 792 0.815 - 0.815 - - - - - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
85. dnph1 ENSDARG00000075730 403 0.815 - - - - - - 0.815 - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
86. ZFHX2 2463 0.815 - 0.815 - - - - - - - zinc finger homeobox 2, transcript variant X2
87. mif4gda ENSDARG00000102080, ENSDARG00000115033, ENSDARG00000117121 198 0.815 - 0.815 - - - - - - - MIF4G domain containing a [Source:ZFIN;Acc:ZDB-GENE-040426-1382]
88. nin ENSDARG00000060298 1558 0.814 - - - - - - 0.814 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
89. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 0.813 - - - - - - 0.813 - - TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
90. ENSDARG00000075779 ENSDARG00000075779 64 0.812 0.812 - - - - - - - -
91. nmd3 ENSDARG00000015676 303 0.811 - - - 0.811 - - - - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
92. sgta ENSDARG00000019941 238 0.811 - 0.811 - - - - - - - small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-8811]
93. CARD11 ENSDARG00000052741 249 0.81 - - - - - - 0.810 - - caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
94. tmeff2b ENSDARG00000058699 82 0.809 0.809 - - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
95. nt5c2l1 ENSDARG00000034852 1014 0.809 - 0.809 - - - - - - - 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
96. rpgra ENSDARG00000056617 77 0.808 - 0.808 - - - - - - - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
97. LRFN2 118 0.807 - 0.807 - - - - - - - leucine rich repeat and fibronectin type III domain containing 2
98. mir10b-2 116 0.806 0.806 - - - - - - - - microRNA 10b-2
99. cx39.9 ENSDARG00000004082 148 0.805 - 0.805 - - - - - - - connexin 39.9 [Source:ZFIN;Acc:ZDB-GENE-040406-2]
100. si:ch211-87m7.2 ENSDARG00000030129 223 0.805 - - - - - - 0.805 - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]

There are 781 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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