Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ftsj1

Gene Name Gene ID Reads Annotation
ftsj1 ENSDARG00000057089, ENSDARG00000112096 551 FtsJ RNA methyltransferase homolog 1 [Source:ZFIN;Acc:ZDB-GENE-041114-83]










Genes with expression patterns similar to ftsj1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ftsj1 ENSDARG00000057089, ENSDARG00000112096 551 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 FtsJ RNA methyltransferase homolog 1 [Source:ZFIN;Acc:ZDB-GENE-041114-83]
2. bmpr2a ENSDARG00000011941 2972 1.554 - 0.841 - - - 0.713 - - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
3. zgc:194469 ENSDARG00000104367 93 1.512 - 0.736 - - - - 0.776 - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
4. si:ch211-194k22.8 ENSDARG00000096711 1318 1.505 - 0.720 - - - 0.785 - - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
5. si:ch211-220f16.2 ENSDARG00000007976 638 1.488 - - - - - 0.720 0.768 - - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
6. med19a ENSDARG00000037392, ENSDARG00000114246 2231 1.45 0.736 0.714 - - - - - - - mediator complex subunit 19a [Source:ZFIN;Acc:ZDB-GENE-060929-232]
7. si:ch211-162i8.5 ENSDARG00000111716 76 1.426 - 0.700 - - - 0.726 - - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
8. igdcc4 ENSDARG00000076919 1303 1.409 - - - - - 0.707 0.702 - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
9. FNIP1 ENSDARG00000102171 1005 0.907 - - - - - - 0.907 - - folliculin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3586]
10. srgn ENSDARG00000077069 612 0.893 - - - - - - 0.893 - - serglycin [Source:ZFIN;Acc:ZDB-GENE-030131-7127]
11. gli2a ENSDARG00000025641 2154 0.861 - - - - - 0.861 - - - GLI family zinc finger 2a [Source:ZFIN;Acc:ZDB-GENE-990706-8]
12. fam20b ENSDARG00000008573 1084 0.861 - 0.861 - - - - - - - family with sequence similarity 20, member B (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-040724-125]
13. pdgfab ENSDARG00000098578, ENSDARG00000109732 718 0.849 - - - - - 0.849 - - - platelet-derived growth factor alpha polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060929-124]
14. wsb1 ENSDARG00000021343 3828 0.848 - 0.848 - - - - - - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
15. zgc:111991 zgc:111991 159 0.842 - 0.842 - - - - - - -
16. pnpla8 ENSDARG00000078745 326 0.84 - 0.840 - - - - - - - patatin-like phospholipase domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-070705-553]
17. foxp4 ENSDARG00000076120 9458 0.835 - 0.835 - - - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
18. smarcb1b ENSDARG00000011594 2413 0.829 - 0.829 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
19. tbcela ENSDARG00000002682 1179 0.829 - - - - - 0.829 - - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
20. CABZ01079490.1 CABZ01079490.1 1808 0.827 - - - - - - 0.827 - -
21. si:dkey-220a11.10 si:dkey-220a11.10 258 0.825 - 0.825 - - - - - - -
22. eif4enif1 ENSDARG00000016177 238 0.825 - - - - - 0.825 - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
23. tubg1 ENSDARG00000015610 2433 0.822 0.822 - - - - - - - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
24. tmem200a ENSDARG00000031540 52 0.821 - - - - - 0.821 - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
25. ncoa6 ENSDARG00000071272 759 0.819 - 0.819 - - - - - - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
26. dopey1 438 0.819 - - - - - 0.819 - - - dopey family member 1, transcript variant X4
27. smap1 ENSDARG00000031302 222 0.818 - 0.818 - - - - - - - small ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-060920-2]
28. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 0.817 - 0.817 - - - - - - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
29. ppp4ca ENSDARG00000070570 8395 0.817 - 0.817 - - - - - - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
30. serpinf1 ENSDARG00000069048 2083 0.815 0.815 - - - - - - - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
31. ptpn4a ENSDARG00000000631, ENSDARG00000112876 626 0.813 - - - - - 0.813 - - - protein tyrosine phosphatase, non-receptor type 4a [Source:ZFIN;Acc:ZDB-GENE-030616-449]
32. eno2 ENSDARG00000014287 2162 0.813 - 0.813 - - - - - - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
33. CCNYL1 ENSDARG00000099692 1330 0.811 - 0.811 - - - - - - - cyclin Y-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-732]
34. arhgap24 ENSDARG00000100973 1105 0.811 - 0.811 - - - - - - - Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
35. get4 ENSDARG00000024398 1818 0.805 - 0.805 - - - - - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
36. cs ENSDARG00000103364 833 0.804 - - - - - 0.804 - - - citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]
37. tsc22d3 ENSDARG00000075666, ENSDARG00000114324 613 0.803 - 0.803 - - - - - - - TSC22 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1433]
38. wfdc1 ENSDARG00000058003 850 0.802 - - - - - - 0.802 - - WAP four-disulfide core domain 1 [Source:ZFIN;Acc:ZDB-GENE-070112-352]
39. dut ENSDARG00000106529 3120 0.801 - 0.801 - - - - - - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
40. fam131bb ENSDARG00000070575 1054 0.8 - 0.800 - - - - - - - family with sequence similarity 131, member Bb [Source:ZFIN;Acc:ZDB-GENE-100922-12]
41. sos2 ENSDARG00000060506 769 0.8 - - - - - 0.800 - - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
42. si:ch73-46j18.5 ENSDARG00000092467 6002 0.798 - 0.798 - - - - - - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
43. nol6 ENSDARG00000059711, ENSDARG00000115621 853 0.796 0.796 - - - - - - - - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
44. ppp3ca ENSDARG00000004988 615 0.796 - 0.796 - - - - - - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
45. raf1b ENSDARG00000059406 301 0.796 - - - - - 0.796 - - - Raf-1 proto-oncogene, serine/threonine kinase b [Source:ZFIN;Acc:ZDB-GENE-090826-2]
46. slain2 ENSDARG00000032114 798 0.793 - - - - - - 0.793 - - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
47. ppardb ENSDARG00000009473 1601 0.793 - 0.793 - - - - - - - peroxisome proliferator-activated receptor delta b [Source:ZFIN;Acc:ZDB-GENE-000112-47]
48. RSF1 RSF1 1242 0.792 - 0.792 - - - - - - -
49. si:ch73-22b20.4 si:ch73-22b20.4 283 0.791 - 0.791 - - - - - - -
50. trim71 ENSDARG00000075593 2750 0.791 - 0.791 - - - - - - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
51. fam96b 2255 0.79 - - - - - 0.790 - - - family with sequence similarity 96, member B
52. pcdh19 ENSDARG00000034344 2378 0.79 - 0.790 - - - - - - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
53. cdkn1ba ENSDARG00000029018 1431 0.79 - 0.790 - - - - - - - cyclin-dependent kinase inhibitor 1Ba [Source:ZFIN;Acc:ZDB-GENE-040812-3]
54. ctnnb1 ENSDARG00000014571 12004 0.789 - 0.789 - - - - - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
55. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.789 - - - - - - 0.789 - - RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
56. hiat1a ENSDARG00000013117 607 0.788 - 0.788 - - - - - - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
57. ptrhd1 ENSDARG00000016122 2705 0.788 0.788 - - - - - - - - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
58. zgc:63863 ENSDARG00000099753 210 0.787 - 0.787 - - - - - - - zgc:63863 [Source:ZFIN;Acc:ZDB-GENE-040426-1278]
59. nfu1 ENSDARG00000068125 1743 0.787 - - - - - - 0.787 - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
60. angptl5 ENSDARG00000056630 203 0.786 - - - - - 0.786 - - - angiopoietin-like 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5054]
61. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.786 - - - - - - 0.786 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
62. SGMS1 ENSDARG00000029621 650 0.786 - - - - - - 0.786 - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
63. rbm25 rbm25 3629 0.786 - 0.786 - - - - - - -
64. zgc:64022 ENSDARG00000070705 364 0.786 - - - - - - 0.786 - - zgc:64022 [Source:ZFIN;Acc:ZDB-GENE-040426-1340]
65. nup214 ENSDARG00000016212 163 0.785 - 0.785 - - - - - - - nucleoporin 214 [Source:ZFIN;Acc:ZDB-GENE-110203-3]
66. sft2d1 ENSDARG00000007362 1763 0.785 - - - - - - 0.785 - - SFT2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1350]
67. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 0.785 - 0.785 - - - - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
68. TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 0.784 - 0.784 - - - - - - - TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]
69. zgc:100832 ENSDARG00000012035 462 0.783 - - - - - - 0.783 - - zgc:100832 [Source:ZFIN;Acc:ZDB-GENE-040801-53]
70. becn1 ENSDARG00000079128 581 0.783 - 0.783 - - - - - - - beclin 1, autophagy related [Source:ZFIN;Acc:ZDB-GENE-040426-1666]
71. kif5aa ENSDARG00000098936 2428 0.782 - 0.782 - - - - - - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
72. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 0.782 - 0.782 - - - - - - - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
73. adam11 ENSDARG00000079204 298 0.782 - 0.782 - - - - - - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
74. UBL4A UBL4A 1115 0.781 - - - - - 0.781 - - -
75. als2b ENSDARG00000076924 738 0.781 - 0.781 - - - - - - - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
76. urod ENSDARG00000006818 856 0.781 - - - - - - 0.781 - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
77. sas sas 1783 0.781 - - - - - 0.781 - - -
78. BX511121.1 ENSDARG00000029997 1774 0.78 - 0.780 - - - - - - -
79. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 0.78 - 0.780 - - - - - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
80. tmem165 ENSDARG00000034600 1174 0.779 - - - - - 0.779 - - - transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]
81. dld ENSDARG00000020219 4928 0.779 - 0.779 - - - - - - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
82. fbxw11a ENSDARG00000104806 1815 0.779 - 0.779 - - - - - - - F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
83. TAPT1 TAPT1 1165 0.779 - 0.779 - - - - - - -
84. C19H7orf41 C19H7orf41 2243 0.779 - 0.779 - - - - - - -
85. dpm3 ENSDARG00000058650 4386 0.779 - - - - - 0.779 - - - dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1782]
86. calhm2 ENSDARG00000039482 138 0.778 - - - - - 0.778 - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
87. coq2 ENSDARG00000059510 505 0.778 - 0.778 - - - - - - - coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-84]
88. igsf9b ENSDARG00000010408 786 0.777 - 0.777 - - - - - - - immunoglobulin superfamily, member 9b [Source:ZFIN;Acc:ZDB-GENE-060810-28]
89. eif3ha ENSDARG00000102452 9238 0.776 - - - - - - 0.776 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
90. mych ENSDARG00000077473 911 0.776 - 0.776 - - - - - - - myelocytomatosis oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030219-51]
91. ubtfl ENSDARG00000038780 1252 0.776 - - - - - - 0.776 - - upstream binding transcription factor, like [Source:ZFIN;Acc:ZDB-GENE-040426-1159]
92. dctn3 ENSDARG00000041363 3351 0.776 - 0.776 - - - - - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
93. si:ch73-299h12.3 ENSDARG00000101790 590 0.775 - 0.775 - - - - - - - si:ch73-299h12.3 [Source:ZFIN;Acc:ZDB-GENE-081031-93]
94. CKAP2L ENSDARG00000100573 1136 0.775 - 0.775 - - - - - - - cytoskeleton associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-6690]
95. smarcad1 smarcad1 1457 0.774 - 0.774 - - - - - - -
96. mcm3_1 ENSDARG00000024204 467 0.774 - - - - - - - 0.774 - minichromosome maintenance complex component 3 [Source:ZFIN;Acc:ZDB-GENE-020419-4]
97. ryk ENSDARG00000007231 1611 0.774 - - - - - 0.774 - - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
98. BX005175.1 ENSDARG00000112442 441 0.773 - 0.773 - - - - - - - protein kinase C, delta b [Source:NCBI gene;Acc:100150844]
99. cbx8a_1 ENSDARG00000087327 109 0.773 - - - - - - 0.773 - - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
100. st8sia5 ENSDARG00000036584 529 0.773 - 0.773 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]

There are 395 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA