Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RSF1

Gene Name Gene ID Reads Annotation
RSF1 RSF1 1242










Genes with expression patterns similar to RSF1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RSF1 RSF1 1242 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.462 0.771 0.744 0.947 - - - - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
3. mcm5 ENSDARG00000019507 6407 2.318 - 0.745 0.812 - - - - - 0.761 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
4. smarcad1 smarcad1 1457 2.304 0.808 0.748 - - - - - - 0.748
5. pogzb ENSDARG00000076542, ENSDARG00000113904 787 2.207 - - - 0.701 - 0.802 - - 0.704 pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3]
6. sin3b ENSDARG00000062472 2025 2.198 - 0.757 - - - 0.716 - - 0.725 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
7. GATAD2B ENSDARG00000005834 3855 1.773 - - 0.920 - - - - - 0.853 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
8. zbtb18 ENSDARG00000028228 3653 1.764 - - 0.972 - - - - - 0.792 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
9. pou3f2a ENSDARG00000070220 817 1.746 - - 0.971 - - - - - 0.775 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
10. coe2 coe2 1633 1.745 - - 0.960 - - - - - 0.785
11. cpsf6 ENSDARG00000018618 3923 1.744 - - 0.920 - - - - - 0.824 cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
12. ghrb ENSDARG00000007671 1082 1.738 - 0.781 0.957 - - - - - - growth hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-071119-4]
13. nin ENSDARG00000060298 1558 1.734 - - 0.963 - - - - - 0.771 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
14. ELOVL4 ELOVL4 3026 1.731 - - 0.972 - - - - - 0.759
15. dlb ENSDARG00000004232 5120 1.725 - - 0.939 - - - - - 0.786 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
16. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.72 - - 0.964 - - - - - 0.756 immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
17. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.693 - - 0.893 - - - - - 0.800 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
18. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1.692 - - 0.964 - - 0.728 - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
19. ubtf ENSDARG00000035066 4070 1.692 - - 0.957 - - - - - 0.735 upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
20. nxf1 ENSDARG00000055076 3251 1.682 - - 0.954 - - - - - 0.728 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
21. eftud2 ENSDARG00000012261 3081 1.68 - 0.740 0.940 - - - - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
22. wdr11 ENSDARG00000075245 743 1.679 - - 0.891 - - - 0.788 - - WD repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-081107-28]
23. lrrc59 ENSDARG00000071426, ENSDARG00000109955 1998 1.675 - - 0.951 - 0.724 - - - - leucine rich repeat containing 59 [Source:ZFIN;Acc:ZDB-GENE-040426-2547]
24. rmi1 ENSDARG00000041376 674 1.675 - - 0.963 - - 0.712 - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
25. AL844567.1 AL844567.1 1605 1.673 - - 0.967 - - - - - 0.706
26. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.667 - - 0.964 - - - - - 0.703 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
27. fzr1 fzr1 2984 1.667 - - 0.956 - - - - - 0.711
28. cplx2l ENSDARG00000018997 3975 1.659 - 0.701 0.958 - - - - - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
29. arpp19b ENSDARG00000039880 4823 1.655 - - 0.935 - - - - - 0.720 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
30. sf3b2 ENSDARG00000018049 4675 1.647 - - 0.942 - - - 0.705 - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
31. prpf38b ENSDARG00000053101 1785 1.645 - - 0.902 - - - - - 0.743 pre-mRNA processing factor 38B [Source:ZFIN;Acc:ZDB-GENE-040426-2878]
32. ncalda ENSDARG00000070688 5069 1.641 - 0.719 0.922 - - - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
33. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.635 - - 0.875 - - - - - 0.760 bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
34. med16 ENSDARG00000040779, ENSDARG00000116309 939 1.633 - - - - - 0.866 - - 0.767 mediator complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-090306-4]
35. rbm25 rbm25 3629 1.614 - 0.810 - - - - - - 0.804
36. tlr5b ENSDARG00000052322 86 1.602 - - - - 0.810 - 0.792 - - toll-like receptor 5b [Source:ZFIN;Acc:ZDB-GENE-040219-15]
37. PBXIP1 PBXIP1 602 1.599 0.826 - - - - - 0.773 - -
38. atad5a ENSDARG00000070568 1840 1.583 - 0.804 - - - - - - 0.779 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
39. thrap3b ENSDARG00000098228 4396 1.58 - - 0.876 - - - - - 0.704 thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
40. NARS2 ENSDARG00000098441 57 1.574 - - - - 0.839 - 0.735 - - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
41. epn1 ENSDARG00000010411 725 1.572 - 0.787 - - - 0.785 - - - epsin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2680]
42. pcdh19 ENSDARG00000034344 2378 1.572 - 0.773 - - - - - - 0.799 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
43. ldb1a ENSDARG00000010137 3035 1.571 0.788 - - - - - - - 0.783 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
44. NPAS3 ENSDARG00000109820 362 1.57 - - - - 0.844 - - - 0.726 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
45. znf131 ENSDARG00000068400, ENSDARG00000110506 920 1.556 - - - 0.716 - 0.840 - - - zinc finger protein 131 [Source:ZFIN;Acc:ZDB-GENE-040426-1563]
46. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.551 - - - 0.718 - - - - 0.833 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
47. znf366 ENSDARG00000040116 168 1.546 - - - - - 0.758 0.788 - - zinc finger protein 366 [Source:ZFIN;Acc:ZDB-GENE-110408-46]
48. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.527 - - - - - 0.773 - - 0.754 KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
49. si:dkey-56e3.3 ENSDARG00000075194 491 1.522 - - - - - 0.715 0.807 - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
50. vamp2 ENSDARG00000056877 2158 1.521 - - - - - 0.731 - - 0.790 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
51. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.52 - - - - - - 0.778 - 0.742 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
52. shc2 ENSDARG00000062080, ENSDARG00000111448 426 1.514 - - - - 0.732 - 0.782 - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
53. tfdp2 ENSDARG00000042835 1985 1.513 - 0.799 - - - - - - 0.714 transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
54. kmt2a ENSDARG00000004537 2169 1.512 - 0.732 - - - - - - 0.780 lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
55. bgnb ENSDARG00000002945, ENSDARG00000110495 76 1.509 - - - - 0.805 0.704 - - - biglycan b [Source:ZFIN;Acc:ZDB-GENE-040426-21]
56. ctr9 ENSDARG00000009170 1265 1.499 - 0.741 - - - - - - 0.758 CTR9 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-3782]
57. wdr36 ENSDARG00000004774 887 1.498 - 0.727 - - - - 0.771 - - WD repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-030131-464]
58. nelfe ENSDARG00000004343 1647 1.498 - - - - - - 0.782 - 0.716 negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]
59. cited4b ENSDARG00000101009, ENSDARG00000114241 3632 1.497 - - - - - 0.708 - - 0.789 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b [Source:ZFIN;Acc:ZDB-GENE-030425-5]
60. hnrpl 6412 1.496 - - - - - 0.702 - - 0.794 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
61. si:dkey-286j15.1 ENSDARG00000040864 1718 1.495 - - - - - 0.774 - - 0.721 si:dkey-286j15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-447]
62. coil ENSDARG00000040070 863 1.495 0.752 - - 0.743 - - - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
63. ISM2 ISM2 1710 1.495 - 0.784 - - - - 0.711 - -
64. bcl11ab ENSDARG00000063153 3032 1.495 - - - 0.728 - - - - 0.767 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
65. zdhhc16a ENSDARG00000007808 1080 1.494 - - - - - 0.714 - - 0.780 zinc finger, DHHC-type containing 16a [Source:ZFIN;Acc:ZDB-GENE-040426-1621]
66. dld ENSDARG00000020219 4928 1.494 - 0.775 - - - - - - 0.719 deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
67. plxnb3 ENSDARG00000032990 98 1.49 - - - - 0.744 0.746 - - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
68. lfng ENSDARG00000037879 11783 1.487 - 0.734 - - - - - - 0.753 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
69. bub1bb ENSDARG00000074927 1667 1.479 - - - - - - 0.766 - 0.713 BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
70. tgif1 ENSDARG00000059337 4020 1.476 0.725 - - - - - - - 0.751 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
71. neo1 neo1 4056 1.471 - 0.745 - - - - - - 0.726
72. TNKS TNKS 2775 1.471 0.714 - - - - - - - 0.757
73. si:ch211-79l20.4 1305 1.471 - - - - - - 0.755 - 0.716 si:ch211-79l20.4, transcript variant X3
74. rnf8 ENSDARG00000044949 751 1.468 - 0.735 - - - - 0.733 - - ring finger protein 8, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-849]
75. ptf1a ENSDARG00000014479 349 1.458 - - - - - 0.758 - - 0.700 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
76. asnsd1 830 1.456 - 0.735 - - 0.721 - - - - asparagine synthetase domain containing 1, transcript variant X1
77. smg7 ENSDARG00000060767 2759 1.451 - 0.719 - - - - - - 0.732 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
78. srpk1b ENSDARG00000031560 2079 1.448 0.745 - - - - - - - 0.703 SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
79. SLC22A23_1 SLC22A23_1 308 1.444 - - - - - 0.731 - - 0.713
80. PCBP4 ENSDARG00000024276 3194 1.444 - 0.733 - - - - - - 0.711 poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
81. stmn1a ENSDARG00000004169 21169 1.431 - 0.712 - - - - - - 0.719 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
82. diras1a ENSDARG00000028066 126 1.429 - - - - - 0.704 - - 0.725 DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
83. tcea1 ENSDARG00000003531 2912 1.426 - - - - - - 0.711 - 0.715 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
84. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.423 0.717 - - - - - - - 0.706 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
85. RAB39B RAB39B 482 1.422 - - - - 0.713 0.709 - - -
86. fgfr2 ENSDARG00000058115 6743 1.419 - - - - - - 0.714 - 0.705 fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
87. msl2a ENSDARG00000038909 1357 1.405 0.703 - - - - - - - 0.702 male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
88. nhlh2 ENSDARG00000025495 1860 0.978 - - 0.978 - - - - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
89. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 0.977 - - 0.977 - - - - - - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
90. nelfcd ENSDARG00000021097 676 0.977 - - 0.977 - - - - - - negative elongation factor complex member C/D [Source:ZFIN;Acc:ZDB-GENE-040426-720]
91. rqcd1 2301 0.975 - - 0.975 - - - - - - RCD1 required for cell differentiation1 homolog (S. pombe)
92. polr2j ENSDARG00000035146 1493 0.975 - - 0.975 - - - - - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
93. JMJD1C_1 JMJD1C_1 3094 0.975 - - 0.975 - - - - - -
94. dennd5a ENSDARG00000017006 3426 0.974 - - 0.974 - - - - - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
95. ORC2 ENSDARG00000101465 399 0.973 - - 0.973 - - - - - - origin recognition complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-061013-682]
96. thbs3b ENSDARG00000012060 922 0.971 - - 0.971 - - - - - - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
97. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 0.971 - - 0.971 - - - - - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
98. zmat2 ENSDARG00000004956 1676 0.971 - - 0.971 - - - - - - zinc finger, matrin-type 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3197]
99. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 0.971 - - 0.971 - - - - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
100. gpatch2 1221 0.97 - - 0.970 - - - - - - G patch domain containing 2, transcript variant X1

There are 1584 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA