Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RAB39B

Gene Name Gene ID Reads Annotation
RAB39B RAB39B 482










Genes with expression patterns similar to RAB39B

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RAB39B RAB39B 482 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. lgi1a ENSDARG00000020493 1218 2.654 - - 0.994 - - 0.802 0.858 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
3. olig2 ENSDARG00000040946 1405 2.64 - 0.772 0.986 - - - 0.882 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
4. sprn ENSDARG00000056004 128 2.636 - 0.726 - - - 0.964 0.946 - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
5. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.632 - - 0.982 - - 0.884 0.766 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
6. CABZ01080599.2 CABZ01080599.2 192 2.622 - 0.929 - - 0.798 - 0.895 - -
7. bhlhe22 ENSDARG00000058039 1673 2.588 - 0.785 - - - 0.952 0.851 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
8. itm2ca ENSDARG00000043448 1265 2.523 - 0.814 - - - 0.847 0.862 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
9. slc12a5b ENSDARG00000078187 329 2.519 - 0.726 - - - 0.925 0.868 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
10. zgc:194665 ENSDARG00000004577 136 2.507 - 0.726 - - - 0.820 0.961 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
11. dbx2 2971 2.494 - - 0.920 - - 0.781 0.793 - - developing brain homeobox 2
12. GADD45G GADD45G 382 2.494 - 0.726 - - - - 0.929 0.839 -
13. elavl4 ENSDARG00000045639 998 2.487 - 0.851 - - - 0.782 0.854 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
14. evlb ENSDARG00000099720 245 2.483 - 0.726 - - - 0.896 0.861 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
15. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 2.464 - 0.726 - - - 0.867 0.871 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
16. ankrd46b ENSDARG00000015780 213 2.454 - - - - - 0.821 0.792 0.841 - ankyrin repeat domain 46b [Source:ZFIN;Acc:ZDB-GENE-050114-7]
17. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.452 - 0.815 - - - 0.794 0.843 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
18. gpr22 gpr22 115 2.446 - 0.726 - - - - 0.802 0.918 -
19. btbd3b ENSDARG00000087517 107 2.434 - 0.726 - - - 0.795 0.913 - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
20. cspg5a ENSDARG00000069981 1699 2.431 - 0.727 - - - 0.832 0.872 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
21. scn1bb ENSDARG00000105003 239 2.422 - 0.791 - - - 0.863 0.768 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
22. sall3b ENSDARG00000057586 982 2.42 - 0.752 - - - 0.832 0.836 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
23. TUSC3 ENSDARG00000078854 1021 2.409 - - - - - 0.809 0.856 0.744 - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
24. nhlh2 ENSDARG00000025495 1860 2.405 - 0.706 - - - 0.851 0.848 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
25. tuba1c ENSDARG00000055216 8384 2.391 - - 0.878 - - 0.707 0.806 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
26. fbxo41 ENSDARG00000078908 95 2.389 - 0.726 - - - 0.776 0.887 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
27. sox19b ENSDARG00000040266 532 2.388 - 0.843 - - - 0.749 0.796 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
28. galnt13 ENSDARG00000099227 1059 2.366 - 0.726 - - - 0.738 - 0.902 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
29. nova2 ENSDARG00000017673 7685 2.28 - - 0.725 - - 0.754 0.801 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
30. mapk11 ENSDARG00000045836 846 2.252 - 0.766 - - - 0.777 0.709 - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
31. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.2 - 0.726 - - - 0.741 0.733 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
32. diras1a ENSDARG00000028066 126 1.935 - - - - - 0.974 0.961 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
33. mapre3a ENSDARG00000020231 100 1.922 - 1.000 - - - - - 0.922 - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
34. pkib ENSDARG00000053110 527 1.921 - - 0.997 - - - 0.924 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
35. pld1b ENSDARG00000057125 325 1.909 0.911 - 0.998 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
36. scn1lab ENSDARG00000062744 155 1.898 - 1.000 - - - - 0.898 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
37. BX247898.1 BX247898.1 75 1.87 - 0.943 - - - - 0.927 - -
38. rims2b ENSDARG00000102690 275 1.832 - 0.943 - - - - 0.889 - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
39. UBL7 UBL7 197 1.829 0.942 - - - - - 0.887 - -
40. KCTD5 KCTD5 109 1.827 - 1.000 - - - 0.827 - - -
41. sema3fa ENSDARG00000011163 759 1.824 - - 0.997 - - 0.827 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
42. clybl ENSDARG00000029729 690 1.819 0.822 - 0.997 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
43. hs3st1l2 ENSDARG00000035578 279 1.818 0.921 - - - - - 0.897 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
44. TMEM55B_1 TMEM55B_1 495 1.811 - - - - - 0.882 0.929 - -
45. paxip1 ENSDARG00000005606 1417 1.81 0.827 - 0.983 - - - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
46. RNF208 ENSDARG00000078056 60 1.807 - - - - - 0.871 0.936 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
47. hemk1 ENSDARG00000078894 397 1.805 - 0.810 0.995 - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
48. APBB3 ENSDARG00000053771 654 1.787 - - - - - 0.906 0.881 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
49. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.786 - 0.886 - - - - 0.900 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
50. her8.2 ENSDARG00000069675 315 1.782 - - - - - 0.854 0.928 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
51. grnas ENSDARG00000091885 71 1.779 - 1.000 - - 0.779 - - - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
52. scn2b ENSDARG00000101713 796 1.778 - - - - - 0.934 0.844 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
53. ascl1a ENSDARG00000038386 1290 1.776 - 0.853 - - - - 0.923 - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
54. ATP6AP1L ATP6AP1L 164 1.771 - - - - - 0.838 0.933 - -
55. lipt1 ENSDARG00000025233 385 1.767 - - 0.996 - - - - 0.771 - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
56. CNTNAP3 ENSDARG00000067824 25 1.766 - - - - - 0.943 0.823 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
57. BX936443.2 BX936443.2 28 1.766 - 0.943 - - - - 0.823 - -
58. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.765 - - - - - 0.847 0.918 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
59. SLC16A1 SLC16A1 37 1.759 - 1.000 - - 0.759 - - - -
60. gng3 ENSDARG00000009553 2530 1.758 - - - - - 0.910 0.848 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
61. LRRC4C ENSDARG00000113411 36 1.757 - - - - - 0.881 - 0.876 - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
62. LRFN5_1 LRFN5_1 96 1.755 - - - - - 0.961 0.794 - -
63. atpv0e2 ENSDARG00000059057 585 1.754 - - - - - - 0.841 0.913 - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
64. prdm13 ENSDARG00000078701 205 1.754 - - - - - 0.823 0.931 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
65. cnrip1b ENSDARG00000037337 39 1.754 - - - - - - 0.823 0.931 - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
66. mnx2a ENSDARG00000042106 939 1.753 - 0.910 - - - - 0.843 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
67. NPTXR NPTXR 241 1.75 - - - - - 0.923 0.827 - -
68. si:ch73-389b16.2 ENSDARG00000103802 340 1.75 - - - - - - 0.956 0.794 - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
69. plp1a ENSDARG00000103732 3544 1.747 - - 0.901 - - - 0.846 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
70. SLITRK4 ENSDARG00000079781 54 1.74 - - - - - 0.808 0.932 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
71. si:ch211-168h21.3 10 1.738 - 1.000 - - - 0.738 - - - si:ch211-168h21.3
72. PRR12 PRR12 38 1.737 - - - - - 0.914 0.823 - -
73. SSX2IP SSX2IP 316 1.73 - 0.874 - - - - 0.856 - -
74. rnf20 ENSDARG00000016664 3641 1.724 - - 0.970 - - - - 0.754 - ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
75. vipas39 ENSDARG00000103690 280 1.72 - 0.723 0.997 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
76. sb:cb252 sb:cb252 2480 1.717 - - 0.825 - - - - 0.892 -
77. CABZ01072954.1 CABZ01072954.1 2330 1.714 - - 0.966 - - - 0.748 - -
78. cuedc1a ENSDARG00000068716 232 1.713 - - - - - 0.833 0.880 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
79. thsd7a thsd7a 194 1.712 - - - - - 0.865 0.847 - -
80. CR548630.1 CR548630.1 3301 1.708 - - 0.971 - - 0.737 - - -
81. ptf1a ENSDARG00000014479 349 1.707 - - - - - 0.884 0.823 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
82. GADD45G_1 GADD45G_1 236 1.706 - - - - - 0.799 0.907 - -
83. ppfia4 ENSDARG00000053205 276 1.703 - - - - - 0.919 0.784 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
84. stx12l ENSDARG00000044605 99 1.699 - - - - - 0.728 0.971 - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
85. dlg2 ENSDARG00000099323 162 1.698 - 0.831 - - - 0.867 - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
86. SPOCK1 ENSDARG00000074644 794 1.697 - - - - - 0.840 0.857 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
87. GALNT16 ENSDARG00000053190 250 1.696 - 0.808 - - - 0.888 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
88. cadm1b ENSDARG00000042677 277 1.695 - - - - - 0.817 0.878 - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
89. slc35g2b ENSDARG00000045447 378 1.695 - - - - - 0.827 0.868 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
90. ctnnd2b ENSDARG00000003779 964 1.694 - - - - - 0.864 0.830 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
91. ckbb ENSDARG00000043257 3503 1.693 - - - - - 0.813 0.880 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
92. rcv1 rcv1 77 1.692 - - - - - - 0.823 0.869 -
93. CLIP3 ENSDARG00000054456 734 1.691 - 0.843 - - - - 0.848 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
94. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.688 - - - - 0.755 0.933 - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
95. PPP1R9B PPP1R9B 855 1.688 - - - - - 0.866 0.822 - -
96. cers6 ENSDARG00000053583 247 1.688 - - - - - - 0.874 0.814 - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
97. U3_1 U3_1 61 1.687 0.945 - - - - - 0.742 - -
98. samm50l ENSDARG00000039681 2465 1.687 0.712 - 0.975 - - - - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
99. rab39b rab39b 449 1.685 - - - - - 0.965 0.720 - -
100. nkx2.9 ENSDARG00000020332 357 1.684 - 0.892 - - - - 0.792 - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]

There are 2462 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA