Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for foxe3

Gene Name Gene ID Reads Annotation
foxe3 ENSDARG00000062892 44 forkhead box E3 [Source:ZFIN;Acc:ZDB-GENE-061214-6]










Genes with expression patterns similar to foxe3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. foxe3 ENSDARG00000062892 44 5 - - 1.000 1.000 1.000 - - 1.000 1.000 forkhead box E3 [Source:ZFIN;Acc:ZDB-GENE-061214-6]
2. wu:fb37b09 wu:fb37b09 10685 1.574 - - - - - - - 0.764 0.810
3. si:dkey-26g8.5 ENSDARG00000089750 7070 1.561 - - - - - - - 0.760 0.801 si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
4. si:dkey-269i1.3 18775 1.556 - - - - - - - 0.755 0.801 si:dkey-269i1.3
5. si:dkey-269i1.2 si:dkey-269i1.2 6364 1.551 - - - - - - - 0.747 0.804
6. he1a 48624 1.547 - - - - - - - 0.757 0.790 hatching enzyme 1a, transcript variant X1
7. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.544 - - 0.720 - 0.824 - - - - H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
8. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1.535 - - - - - - - 0.758 0.777 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
9. zgc:174855 ENSDARG00000094559 33515 1.533 - - - - - - - 0.741 0.792 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
10. he1b 11900 1.533 - - - - - - - 0.755 0.778 hatching enzyme 1b
11. zgc:174153 ENSDARG00000079376 12007 1.514 - - - - - - - 0.762 0.752 zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
12. si:dkey-269i1.4 ENSDARG00000095744, ENSDARG00000100833 1945 1.483 - - - - - - - 0.724 0.759 si:dkey-269i1.4 [Source:ZFIN;Acc:ZDB-GENE-121214-37]
13. cyp2aa7 ENSDARG00000103766 8 1.465 - - - 0.738 0.727 - - - - cytochrome P450, family 2, subfamily AA, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-071004-48]
14. tmprss9 ENSDARG00000029841 435 1.464 - - - - - - - 0.712 0.752 transmembrane serine protease 9 [Source:ZFIN;Acc:ZDB-GENE-050208-573]
15. otomp ENSDARG00000040306 682 0.899 - - - 0.899 - - - - - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
16. cxcr3.1 ENSDARG00000007358, ENSDARG00000078177, ENSDARG00000111607 9 0.88 - - - - - - - 0.880 - chemokine (C-X-C motif) receptor 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060130-38]
17. ddrgk1 ENSDARG00000037172 14 0.88 - - - - - - - 0.880 - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
18. gpc2 ENSDARG00000104217 10 0.88 - - - - - - - 0.880 - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
19. PEG3_7 PEG3_7 15 0.88 - - - - - - - 0.880 -
20. gpx3 ENSDARG00000043342 101 0.87 - - - 0.870 - - - - - glutathione peroxidase 3 [Source:ZFIN;Acc:ZDB-GENE-070222-3]
21. zgc:110045 ENSDARG00000057141, ENSDARG00000110961 4 0.856 - - - - 0.856 - - - - zgc:110045 [Source:ZFIN;Acc:ZDB-GENE-050706-149]
22. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 0.843 - - - 0.843 - - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
23. CELA1 CELA1 14 0.842 - - - - - - - 0.842 -
24. si:ch211-179l5.6 si:ch211-179l5.6 33 0.838 - - - 0.838 - - - - -
25. si:dkey-72l14.3 ENSDARG00000061044 59 0.836 - - - - - - - 0.836 - si:dkey-72l14.3 [Source:ZFIN;Acc:ZDB-GENE-060526-332]
26. diaph3_1 ENSDARG00000090785 3 0.833 - - - 0.833 - - - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
27. si:ch211-234c11.3_1 ENSDARG00000093615 10 0.833 - - - 0.833 - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
28. dnajc5b ENSDARG00000058147 6 0.833 - - - 0.833 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
29. flt3 ENSDARG00000058503 32 0.833 - - - 0.833 - - - - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
30. cryabb ENSDARG00000101380, ENSDARG00000109545 8 0.833 - - - 0.833 - - - - - crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
31. si:ch211-80h18.1 ENSDARG00000078522 1941 0.832 - - - 0.832 - - - - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
32. RFESD ENSDARG00000058725 27 0.831 - - - 0.831 - - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
33. cep89 ENSDARG00000005092 4 0.831 - - - 0.831 - - - - - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
34. NRG3 NRG3 22 0.828 - - - - - - - - 0.828
35. rcv1 rcv1 77 0.825 - - - - - - - - 0.825
36. grtp1b ENSDARG00000030269 24 0.823 - - - - - - - 0.823 - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
37. CCDC66 2 0.821 - - - - - - - 0.821 - coiled-coil domain containing 66
38. si:dkey-25i10.5 si:dkey-25i10.5 18 0.818 - - - 0.818 - - - - -
39. CU929052.1 CU929052.1 642 0.815 - - - - 0.815 - - - -
40. otpb ENSDARG00000058379 1143 0.81 - - - 0.810 - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
41. grm2a ENSDARG00000004150 64 0.809 - - 0.809 - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
42. zp3.2 ENSDARG00000090768, ENSDARG00000115457 79 0.808 - - - - - - - 0.808 - zona pellucida glycoprotein 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050626-121]
43. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 0.803 - - - 0.803 - - - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
44. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 0.799 - - - - 0.799 - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
45. zgc:171844 ENSDARG00000067813 30 0.796 - - - - - - - - 0.796 zgc:171844 [Source:ZFIN;Acc:ZDB-GENE-080516-8]
46. FAM83F FAM83F 8 0.796 - - - - - - - - 0.796
47. slc39a4 ENSDARG00000059361 10 0.793 - - - 0.793 - - - - - solute carrier family 39 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-060315-8]
48. rhpn1 ENSDARG00000052454 3 0.793 - - - 0.793 - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
49. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 0.781 - - - 0.781 - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
50. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 0.779 - - - 0.779 - - - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
51. rxfp1 ENSDARG00000090071 6 0.778 - - - - - - - 0.778 - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
52. acta2 ENSDARG00000045180 96 0.774 - - - 0.774 - - - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
53. npas4a ENSDARG00000055752 5 0.772 - - - - - - - 0.772 - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
54. si:ch211-67e16.3 ENSDARG00000078193 11 0.771 - - - - 0.771 - - - - si:ch211-67e16.3 [Source:ZFIN;Acc:ZDB-GENE-070912-310]
55. wu:fa26c03 18714 0.77 - - - - - - - 0.770 - wu:fa26c03
56. CABZ01062083.1 CABZ01062083.1 40 0.77 - - - - - - - 0.770 -
57. foxf2b ENSDARG00000070389 67 0.77 - - - - 0.770 - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
58. mphosph6 ENSDARG00000093007 340 0.769 - - - - 0.769 - - - - M-phase phosphoprotein 6 [Source:ZFIN;Acc:ZDB-GENE-040801-137]
59. rorb ENSDARG00000033498 544 0.767 - - 0.767 - - - - - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
60. si:dkeyp-1h4.8 208 0.767 - - - - - - - - 0.767 si:dkeyp-1h4.8
61. tbx1 ENSDARG00000031891 397 0.767 - - - 0.767 - - - - - T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]
62. cps1 ENSDARG00000020028 67 0.765 - - - - 0.765 - - - - carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
63. six3b ENSDARG00000054879 2416 0.76 - - 0.760 - - - - - - SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
64. si:dkey-239j18.3 ENSDARG00000089806 12918 0.758 - - - - - - - 0.758 - si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
65. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 0.758 - - 0.758 - - - - - - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
66. vsx2 ENSDARG00000005574 102 0.757 - - 0.757 - - - - - - visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
67. celf4 ENSDARG00000070045 1537 0.756 - - - - 0.756 - - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
68. npvf ENSDARG00000036227 23 0.755 - - - 0.755 - - - - - neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
69. snapc4 ENSDARG00000067673 81 0.755 - - - 0.755 - - - - - small nuclear RNA activating complex, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5794]
70. zgc:174623 37 0.755 - - - - 0.755 - - - - zgc:174623, transcript variant X1
71. CABZ01044814.2 CABZ01044814.2 25711 0.755 - - - - - - - 0.755 -
72. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.754 - - 0.754 - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
73. pitx3 ENSDARG00000070069 363 0.752 - - - - 0.752 - - - - paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
74. nkx2.1b nkx2.1b 125 0.751 - - - 0.751 - - - - -
75. stm ENSDARG00000035694 1567 0.748 - - - 0.748 - - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
76. hpda ENSDARG00000018351 37 0.746 - - - 0.746 - - - - - 4-hydroxyphenylpyruvate dioxygenase a [Source:ZFIN;Acc:ZDB-GENE-040426-986]
77. SH2D4B SH2D4B 4 0.746 - - - 0.746 - - - - -
78. lrp8 ENSDARG00000070074, ENSDARG00000116879 323 0.746 - - - 0.746 - - - - - low density lipoprotein receptor-related protein 8, apolipoprotein e receptor [Source:ZFIN;Acc:ZDB-GENE-050506-134]
79. CR382327.1 ENSDARG00000088739 56 0.744 - - - 0.744 - - - - -
80. si:dkeyp-117b11.3 ENSDARG00000095437 3 0.743 - - - - - - - 0.743 - si:dkeyp-117b11.3 [Source:ZFIN;Acc:ZDB-GENE-081104-455]
81. si:ch73-79g6.3 si:ch73-79g6.3 1 0.743 - - - - - - - 0.743 -
82. trim35-3 ENSDARG00000052255 1 0.743 - - - - - - - 0.743 - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
83. si:ch73-132k15.2 ENSDARG00000095867 5 0.743 - - - - - - - 0.743 - si:ch73-132k15.2 [Source:ZFIN;Acc:ZDB-GENE-110411-191]
84. zgc:73349 zgc:73349 4 0.743 - - - - - - - 0.743 -
85. BX323448.1 ENSDARG00000116236 10 0.743 - - - - - - - 0.743 -
86. cx36.7 ENSDARG00000017927 1 0.743 - - - - - - - 0.743 - connexin 36.7 [Source:ZFIN;Acc:ZDB-GENE-050616-5]
87. si:ch1073-47b13.2 si:ch1073-47b13.2 3 0.743 - - - - - - - 0.743 -
88. si:dkey-30j19.3 si:dkey-30j19.3 3 0.743 - - - - - - - 0.743 -
89. si:rp71-29l5.1 si:rp71-29l5.1 0 0.743 - - - - - - - 0.743 -
90. si:dkey-27h10.2 ENSDARG00000094485 3 0.743 - - - - - - - 0.743 - si:dkey-27h10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-296]
91. HIST1H2BA ENSDARG00000116654 10 0.743 - - - - - - - 0.743 - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
92. cdhr1a ENSDARG00000004643 7 0.743 - - - - - - - 0.743 - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
93. nkd3 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 2 0.743 - - - - - - - 0.743 - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
94. BX284672.1 BX284672.1 11 0.743 - - - - - - - 0.743 -
95. CU469509.3 CU469509.3 1 0.743 - - - - - - - 0.743 -
96. lonrf1 ENSDARG00000075048 13 0.743 - - - - - - - 0.743 - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
97. CR847893.1 CR847893.1 6 0.743 - - - - - - - 0.743 -
98. LRRTM4 2 0.743 - - - - - - - 0.743 - leucine rich repeat transmembrane neuronal 4
99. si:ch211-223a21.3 ENSDARG00000104737 28 0.743 - - - - - - - 0.743 - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
100. TRIM14_13 TRIM14_13 18 0.743 - - - - - - - 0.743 -

There are 143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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