Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for dse

Gene Name Gene ID Reads Annotation
dse ENSDARG00000017988 2169 dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]










Genes with expression patterns similar to dse

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dse ENSDARG00000017988 2169 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
2. vps25 ENSDARG00000059079 3747 2.497 0.878 0.827 - - - - 0.792 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
3. pdia5 ENSDARG00000069242 3576 2.409 - 0.978 - - - 0.723 0.708 - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
4. ap1s3b ENSDARG00000027966 1064 2.375 0.878 - - - - - 0.713 - 0.784 adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
5. znf395a ENSDARG00000060113 3874 1.794 - 0.969 - - - 0.825 - - - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
6. tmem110 497 1.782 0.798 0.984 - - - - - - - transmembrane protein 110
7. lpar2b ENSDARG00000042561 1086 1.777 - 0.987 - - - 0.790 - - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
8. gata5 ENSDARG00000017821 1146 1.775 - 0.979 - - - 0.796 - - - GATA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-980526-340]
9. nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 1.767 - 0.979 - - - - 0.788 - - nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]
10. carhsp1 ENSDARG00000053129 2100 1.76 - 0.979 - - - - - 0.781 - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
11. ak3 ENSDARG00000058226 3160 1.745 - 0.979 - 0.766 - - - - - adenylate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2142]
12. tbc1d17 ENSDARG00000005927 1769 1.738 - 0.972 - - - - 0.766 - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
13. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 1.735 - 0.983 - - - - 0.752 - - SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
14. ptp4a2 ptp4a2 3196 1.731 - 0.977 - - - - 0.754 - -
15. akirin2 ENSDARG00000058729 13245 1.728 - 0.989 - - - - 0.739 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
16. gadd45bb ENSDARG00000013576 331 1.727 0.899 - - - - - - - 0.828 growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
17. nrd1 nrd1 324 1.715 - 0.984 - - - - - - 0.731
18. helz ENSDARG00000030560 3259 1.711 - 0.979 - - - - 0.732 - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
19. bag6 ENSDARG00000075892 3782 1.706 - 0.971 - - - - 0.735 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
20. klf3 ENSDARG00000015495, ENSDARG00000114143 1640 1.702 - 0.981 - - - 0.721 - - - Kruppel-like factor 3 (basic) [Source:ZFIN;Acc:ZDB-GENE-011116-1]
21. arhgef1b ENSDARG00000055837 2330 1.699 - 0.982 - - - - 0.717 - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
22. SLC12A6 SLC12A6 883 1.697 - 0.981 - - - - 0.716 - -
23. tnfaip8l2b ENSDARG00000046148 1133 1.691 - 0.982 - - - 0.709 - - - tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
24. grhprb ENSDARG00000019986, ENSDARG00000109547 3233 1.691 - 0.977 - - - 0.714 - - - glyoxylate reductase/hydroxypyruvate reductase b [Source:ZFIN;Acc:ZDB-GENE-040426-1847]
25. FP236813.1 FP236813.1 1842 1.689 - 0.982 - - - - 0.707 - -
26. hoxa10b ENSDARG00000031337 3992 1.689 - 0.974 - - - - - 0.715 - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
27. gyltl1b 1368 1.665 - 0.964 - 0.701 - - - - - glycosyltransferase-like 1b, transcript variant X3
28. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.649 - 0.945 - - - 0.704 - - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
29. gng5 ENSDARG00000039830 12102 1.646 - 0.907 - - - - 0.739 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
30. wls ENSDARG00000009534 8719 1.64 - 0.923 - - - - 0.717 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
31. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.633 - 0.921 - - - - 0.712 - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
32. fut9d ENSDARG00000028098 427 1.622 0.730 - - - - - - - 0.892 fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
33. trim71 ENSDARG00000075593 2750 1.62 - - - - - 0.894 0.726 - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
34. zgc:110333 ENSDARG00000040628 3250 1.605 0.760 0.845 - - - - - - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
35. aldh4a1 ENSDARG00000038207 4639 1.599 - 0.887 - - - 0.712 - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
36. srebf2 ENSDARG00000063438 1982 1.594 - - - - - 0.884 0.710 - - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
37. CD99L2 ENSDARG00000056722 5588 1.587 - 0.829 - - - - 0.758 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
38. mid1ip1l ENSDARG00000018145 2789 1.58 - - - - - 0.795 - - 0.785 MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
39. SLC25A6 ENSDARG00000005853, ENSDARG00000113366 975 1.57 - - - - - - 0.722 - 0.848 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
40. aldh1l1 ENSDARG00000077004, ENSDARG00000114342 2113 1.567 - - - - - 0.760 - - 0.807 aldehyde dehydrogenase 1 family, member L1 [Source:ZFIN;Acc:ZDB-GENE-100519-4]
41. rabgef1 ENSDARG00000014430 1176 1.552 - - - - - - 0.833 - 0.719 RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
42. MAP7 MAP7 98 1.547 0.809 - - - - - - - 0.738
43. mtpn ENSDARG00000104018 4264 1.546 - - - - - - 0.769 - 0.777 myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
44. SHKBP1 ENSDARG00000105050 1139 1.544 0.763 - - - - - 0.781 - - SH3KBP1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19214]
45. AIM1L AIM1L 899 1.543 0.808 - - - - - 0.735 - -
46. zgc:113314 ENSDARG00000069453 833 1.528 - - - - - - - 0.796 0.732 zgc:113314 [Source:ZFIN;Acc:ZDB-GENE-050913-19]
47. sult6b1 ENSDARG00000086826 2070 1.525 - - - - - 0.733 - 0.792 - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
48. rassf6 ENSDARG00000000804 1090 1.517 - - - - - - 0.789 0.728 - Ras association (RalGDS/AF-6) domain family 6 [Source:ZFIN;Acc:ZDB-GENE-030616-513]
49. fam162a ENSDARG00000063344 1812 1.497 - 0.731 - - - - 0.766 - - family with sequence similarity 162, member A [Source:ZFIN;Acc:ZDB-GENE-030131-8307]
50. COL7A1 ENSDARG00000021720 2210 1.495 - - - - - 0.724 - - 0.771 collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]
51. ptplb ptplb 6135 1.494 - - - - - 0.773 0.721 - -
52. dopey2 1088 1.491 - - - - - 0.763 - 0.728 - dopey family member 2, transcript variant X2
53. reep3 reep3 2536 1.487 - - - - - 0.715 0.772 - -
54. acvrl1 ENSDARG00000018179 308 1.479 - - - - - 0.708 - - 0.771 activin A receptor like type 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
55. si:ch211-166e11.5 ENSDARG00000100407 576 1.475 - - - - - 0.703 - - 0.772 si:ch211-166e11.5 [Source:ZFIN;Acc:ZDB-GENE-070912-142]
56. ier3ip1 ENSDARG00000039601 5529 1.475 - 0.745 - - - - 0.730 - - immediate early response 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050506-106]
57. C5H9orf16 C5H9orf16 743 1.465 0.743 - - - - - 0.722 - -
58. myrf ENSDARG00000078676 614 1.463 - - - - - 0.760 0.703 - - myelin regulatory factor [Source:ZFIN;Acc:ZDB-GENE-080204-57]
59. cebpd ENSDARG00000087303 2195 1.459 - - - - - 0.711 - - 0.748 CCAAT enhancer binding protein delta [Source:ZFIN;Acc:ZDB-GENE-020111-4]
60. cfd ENSDARG00000039579, ENSDARG00000110892, ENSDARG00000115542 670 1.45 - - - - - 0.746 0.704 - - complement factor D (adipsin) [Source:ZFIN;Acc:ZDB-GENE-050522-411]
61. adipor2 ENSDARG00000101849 3156 1.437 - - - - - 0.703 0.734 - - adiponectin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-60]
62. gucd1 ENSDARG00000068438, ENSDARG00000111855 438 1.429 - - - - - 0.715 0.714 - - guanylyl cyclase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-872]
63. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 1.426 - - - - - 0.716 0.710 - - fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
64. cd2ap ENSDARG00000015224 2830 1.425 - - - - - 0.704 0.721 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
65. CLEC4A CLEC4A 1016 1.425 0.713 - - - - 0.712 - - -
66. esrp1 ENSDARG00000011245 2097 1.425 - - - - - 0.713 0.712 - - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
67. SLC25A24 ENSDARG00000008568 2005 1.415 - - - - - - 0.713 - 0.702 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
68. zc3h15 ENSDARG00000015889 3861 0.994 - 0.994 - - - - - - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
69. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 0.994 - 0.994 - - - - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
70. trappc4 ENSDARG00000027418 1491 0.993 - 0.993 - - - - - - - trafficking protein particle complex 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1734]
71. ing5b ENSDARG00000068175 2502 0.993 - 0.993 - - - - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
72. prrc1 ENSDARG00000044304 1567 0.99 - 0.990 - - - - - - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
73. hmbox1b 597 0.99 - 0.990 - - - - - - - homeobox containing 1 b, transcript variant X3
74. CT573468.1 CT573468.1 283 0.99 - 0.990 - - - - - - -
75. ddx3 ddx3 4076 0.99 - 0.990 - - - - - - -
76. exoc1 ENSDARG00000043019 819 0.988 - 0.988 - - - - - - - exocyst complex component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1057]
77. sh3glb1 sh3glb1 1335 0.988 - 0.988 - - - - - - -
78. ptcd3 ENSDARG00000103856 2107 0.988 - 0.988 - - - - - - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
79. snx16 ENSDARG00000046072 931 0.988 - 0.988 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
80. LDLR LDLR 838 0.987 - 0.987 - - - - - - -
81. pon2 ENSDARG00000016856 1382 0.987 - 0.987 - - - - - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
82. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.987 - 0.987 - - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
83. scube2 ENSDARG00000037362 2833 0.986 - 0.986 - - - - - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
84. SLC6A16_1 SLC6A16_1 1130 0.986 - 0.986 - - - - - - -
85. tiprl ENSDARG00000032353 1045 0.986 - 0.986 - - - - - - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
86. gle1 ENSDARG00000043559 1362 0.986 - 0.986 - - - - - - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
87. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.986 - 0.986 - - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
88. tgfb3 ENSDARG00000019367 2327 0.986 - 0.986 - - - - - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
89. C13H10orf54 C13H10orf54 450 0.986 - 0.986 - - - - - - -
90. CR293507.1 ENSDARG00000112572 3198 0.986 - 0.986 - - - - - - -
91. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 0.986 - 0.986 - - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
92. SMARCA1 ENSDARG00000012776 673 0.986 - 0.986 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
93. trpc4apa ENSDARG00000018840 2543 0.986 - 0.986 - - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
94. mapk12a ENSDARG00000042021 1573 0.986 - 0.986 - - - - - - - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
95. si:ch211-129c21.1 ENSDARG00000024775 371 0.986 - 0.986 - - - - - - - si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
96. ssr3 ENSDARG00000014165, ENSDARG00000111483 1881 0.986 - 0.986 - - - - - - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
97. eps15l1a ENSDARG00000042670 1565 0.986 - 0.986 - - - - - - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
98. ENSDARG00000096553 ENSDARG00000096553 388 0.985 - 0.985 - - - - - - -
99. KIF2A ENSDARG00000043571 1560 0.985 - 0.985 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
100. zgc:113625 ENSDARG00000054160 276 0.985 - 0.985 - - - - - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]

There are 1223 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA