Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for dhx9

Gene Name Gene ID Reads Annotation
dhx9 ENSDARG00000079725 1241 DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]










Genes with expression patterns similar to dhx9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dhx9 ENSDARG00000079725 1241 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
2. marcksa ENSDARG00000004049 2518 3.202 - 0.777 - 0.869 - - - 0.752 0.804 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
3. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.498 - - - 0.829 0.911 - - - 0.758 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
4. ints1 ENSDARG00000100419 1958 2.458 - 0.786 - - 0.948 - - 0.724 - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
5. rnf220a ENSDARG00000060929 693 2.432 0.805 - - 0.905 - 0.722 - - - ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]
6. aebp2 ENSDARG00000006038 462 2.306 0.795 - - - - - - 0.788 0.723 AE binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2885]
7. ENDOD1_5 ENDOD1_5 8723 2.29 - 0.714 - 0.840 - 0.736 - - -
8. ZFHX3 ENSDARG00000103057 7759 2.286 - - - 0.763 0.790 - - 0.733 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
9. ephb3a ENSDARG00000031548 1872 2.272 - 0.715 - 0.787 - 0.770 - - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
10. pou3f2a ENSDARG00000070220 817 2.138 - - - - - 0.708 - 0.726 0.704 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
11. arnt2 ENSDARG00000103697 5731 2.131 - - 0.708 - - 0.708 - 0.715 - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
12. gcfc2 ENSDARG00000079020 479 1.883 - - - - 0.978 0.905 - - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
13. rybpa ENSDARG00000037773 904 1.879 - - - 0.893 0.986 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
14. cdan1 ENSDARG00000042261 658 1.878 - - - 0.895 0.983 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
15. tdg tdg 3269 1.829 - - - 0.866 0.963 - - - -
16. lrrfip2 ENSDARG00000010400 2633 1.824 - - - 0.845 0.979 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
17. gpr98 gpr98 717 1.804 - - - 0.828 0.976 - - - -
18. zcchc17 ENSDARG00000018936 1577 1.776 - - - 0.826 0.950 - - - - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
19. rgma ENSDARG00000012248 2238 1.771 - - - - 0.945 0.826 - - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
20. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.77 - - - 0.804 0.966 - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
21. anapc1 ENSDARG00000075687 488 1.755 - - - 0.772 0.983 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
22. mier1a ENSDARG00000041072 1690 1.737 - - - 0.774 0.963 - - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
23. tmem176l.1 ENSDARG00000099491 860 1.736 - 0.763 - - 0.973 - - - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
24. suv39h1b ENSDARG00000055753 1540 1.723 - - - 0.919 - - - 0.804 - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
25. usp49 ENSDARG00000000229 706 1.711 - - - 0.931 - 0.780 - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
26. med23 ENSDARG00000029157 4453 1.706 - - - - 0.971 - 0.735 - - mediator complex subunit 23 [Source:ZFIN;Acc:ZDB-GENE-040724-82]
27. zgc:92664 ENSDARG00000015161 1651 1.704 - - - 0.734 0.970 - - - - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
28. cnn3b ENSDARG00000029856 4807 1.702 - - - - 0.963 - - 0.739 - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
29. smg7 ENSDARG00000060767 2759 1.699 - - - - 0.954 - - - 0.745 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
30. utp3 ENSDARG00000056720 922 1.697 - 0.713 - - 0.984 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
31. gon4l ENSDARG00000005867 982 1.696 - 0.716 - - 0.980 - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
32. ezh2 ENSDARG00000010571 3273 1.689 - - - - 0.926 - - - 0.763 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
33. HIST1H4C HIST1H4C 6190 1.687 - - - - 0.909 - - - 0.778
34. dla ENSDARG00000010791 9281 1.685 - - - - 0.929 - - - 0.756 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
35. cnpy1 ENSDARG00000003757 1132 1.682 - - - 0.705 0.977 - - - - canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
36. tcea1 ENSDARG00000003531 2912 1.682 - - - - 0.956 - - - 0.726 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
37. zdhhc17 ENSDARG00000070441 1073 1.673 0.783 - - 0.890 - - - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
38. golga7 ENSDARG00000057676 4691 1.67 - - - 0.773 0.897 - - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
39. mcrs1 ENSDARG00000020840 3232 1.668 - - - - 0.950 - 0.718 - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
40. anapc7 ENSDARG00000063005 1139 1.651 - - - 0.932 - - - - 0.719 anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
41. eif4h ENSDARG00000042252 6742 1.65 - - - 0.831 - - - - 0.819 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
42. st18 663 1.648 - - - 0.862 - - - 0.786 - suppression of tumorigenicity 18, zinc finger
43. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.646 - - - - 0.928 - 0.718 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
44. kmt2bb ENSDARG00000060697 5230 1.641 - - - 0.809 0.832 - - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
45. ldb1a ENSDARG00000010137 3035 1.631 - - - 0.829 - - - 0.802 - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
46. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.629 - - - 0.831 - - - 0.798 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
47. rexo1 ENSDARG00000026986 770 1.629 - - - 0.904 - - - - 0.725 REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
48. snrpb ENSDARG00000011125 11729 1.625 - - - - 0.858 - 0.767 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
49. ndrg4 ENSDARG00000103937 1234 1.624 - - - 0.853 - - - - 0.771 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
50. lmo1 ENSDARG00000034504 260 1.621 - - - 0.903 - - - - 0.718 LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
51. ANK1_1 ANK1_1 507 1.612 - - - 0.864 - 0.748 - - -
52. CBFA2T3 ENSDARG00000079012 6799 1.61 - - - - 0.786 0.824 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
53. nfil3-2 658 1.605 - 0.723 - 0.882 - - - - - nuclear factor, interleukin 3 regulated, member 2, transcript variant X1
54. larp7 ENSDARG00000017315 1194 1.604 - - - 0.889 - 0.715 - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
55. dixdc1b ENSDARG00000056267 307 1.604 - - - 0.901 - - - 0.703 - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
56. tmem229b ENSDARG00000060569 516 1.604 - - - 0.849 - 0.755 - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
57. LDLRAD4 LDLRAD4 1237 1.6 - - - 0.857 - - - - 0.743
58. sdc4 ENSDARG00000059906 10105 1.599 - 0.714 - - 0.885 - - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
59. ccnk ENSDARG00000034146 1255 1.596 - - - 0.834 - - - 0.762 - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
60. C8H1orf106 C8H1orf106 2690 1.594 - - - 0.866 - 0.728 - - -
61. epha7 ENSDARG00000004635, ENSDARG00000112305 1373 1.593 - - - 0.848 - - - - 0.745 eph receptor A7 [Source:ZFIN;Acc:ZDB-GENE-030131-3745]
62. creb1b ENSDARG00000093420 524 1.592 - - - 0.890 - 0.702 - - - cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]
63. sgce ENSDARG00000012138 912 1.59 - - - 0.837 - - - 0.753 - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
64. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.587 - - - 0.830 - - - 0.757 - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
65. arhgef2 ENSDARG00000075819 2173 1.585 - - - - - - - 0.814 0.771 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
66. znf646p znf646p 719 1.581 - 0.864 - - - - - - 0.717
67. npm1b ENSDARG00000037675 5448 1.581 - - - - 0.833 - - 0.748 - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
68. prpf40a ENSDARG00000058467 6565 1.579 - - - - 0.877 - - - 0.702 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
69. pcdh10a ENSDARG00000099729 2214 1.572 - - - - 0.861 - - - 0.711 protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
70. mapre1b ENSDARG00000002659 9119 1.57 - - - - 0.822 - - - 0.748 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
71. cxxc1l cxxc1l 1035 1.563 - - - 0.852 - - - - 0.711
72. CABZ01080568.2 CABZ01080568.2 2137 1.561 - - - 0.815 - - - - 0.746
73. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.561 - - - 0.852 - - - - 0.709 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
74. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.556 - - - - - - - 0.772 0.784 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
75. nup210 ENSDARG00000063333 995 1.552 - 0.757 - 0.795 - - - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
76. si:ch211-202e12.3 401 1.55 - - - - - - - 0.849 0.701 si:ch211-202e12.3, transcript variant X6
77. med16 ENSDARG00000040779, ENSDARG00000116309 939 1.549 - - - - - 0.795 - - 0.754 mediator complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-090306-4]
78. smarca5 ENSDARG00000052348 15433 1.546 - - - - - 0.803 - - 0.743 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
79. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.545 - - - - - - - 0.791 0.754 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
80. abca1a ENSDARG00000074635 1085 1.544 - - - 0.778 - 0.766 - - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
81. atrnl1b ENSDARG00000006420 641 1.54 - - - 0.813 - 0.727 - - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
82. gsk3ab ENSDARG00000015681 1322 1.54 - 0.798 - 0.742 - - - - - glycogen synthase kinase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-990714-3]
83. pcdh19 ENSDARG00000034344 2378 1.532 - - - - - - - 0.710 0.822 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
84. cct8 ENSDARG00000008243 6843 1.532 - 0.731 - - - 0.801 - - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
85. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.532 - - - 0.793 - - - - 0.739 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
86. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1.531 - - - 0.800 - - - - 0.731 replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
87. GABARAP GABARAP 8341 1.531 - 0.702 - - 0.829 - - - -
88. nbeaa ENSDARG00000070080 862 1.524 - - - - - - - 0.751 0.773 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
89. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.523 - - - 0.754 - - - 0.769 - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
90. prpsap2 ENSDARG00000019326 1463 1.521 - - - - - - - 0.750 0.771 phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
91. MCAM MCAM 1765 1.519 - - - 0.730 - 0.789 - - -
92. timm8b ENSDARG00000055708 7291 1.518 - 0.717 - - 0.801 - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
93. u2af2a ENSDARG00000012505 2920 1.512 - - - 0.741 - - - 0.771 - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
94. ubr5 ENSDARG00000018192 9267 1.511 - - - - - - 0.740 0.771 - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
95. hars ENSDARG00000003693 7217 1.51 - - - - 0.791 0.719 - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
96. si:dkey-56e3.3 ENSDARG00000075194 491 1.509 - - - 0.790 - 0.719 - - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
97. golga7ba ENSDARG00000036295 1460 1.507 - - - 0.762 - - - - 0.745 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
98. max ENSDARG00000024844 6035 1.504 - - - 0.791 - - - - 0.713 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
99. ssbp4 ENSDARG00000056483 10196 1.502 - - - - - 0.706 - 0.796 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
100. bahcc1 bahcc1 1934 1.502 - - - 0.797 - 0.705 - - -

There are 1565 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA