Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for dbx1b

Gene Name Gene ID Reads Annotation
dbx1b ENSDARG00000001859, ENSDARG00000113468 810 developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]










Genes with expression patterns similar to dbx1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
2. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 3.421 0.831 0.799 - - - 0.830 0.961 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
3. si:ch211-278j3.3 ENSDARG00000020284 478 3.4 0.758 0.805 - - 0.975 - 0.862 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
4. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 3.379 0.927 0.766 - - - 0.713 0.973 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
5. nbeaa ENSDARG00000070080 862 3.329 0.786 0.927 - - - 0.712 0.904 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
6. adam11 ENSDARG00000079204 298 3.22 0.706 0.895 - - - 0.792 0.827 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
7. her2 ENSDARG00000038205 3219 3.21 0.800 - - - 0.787 0.798 0.825 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
8. syngr3a ENSDARG00000014871 405 3.205 0.799 - - 0.720 - 0.913 0.773 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
9. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 3.125 - - - 0.711 0.780 0.805 0.829 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
10. CU683901.1 CU683901.1 187 3.122 0.819 - - 0.725 - 0.857 0.721 - -
11. mllt11 ENSDARG00000071026 2518 3.12 0.725 0.868 - - - 0.777 0.750 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
12. msi1 ENSDARG00000010710 2634 3.116 - 0.735 - 0.708 - 0.790 0.883 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
13. atp6ap1a ENSDARG00000041417 898 3.095 0.774 0.860 - 0.722 - - 0.739 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
14. LANCL2 ENSDARG00000045465 1221 2.93 - 0.710 - 0.736 - 0.745 0.739 - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
15. gng3 ENSDARG00000009553 2530 2.782 - - - - 0.919 0.992 0.871 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
16. nell2b ENSDARG00000062797 854 2.779 0.929 - - - - 0.937 0.913 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
17. dtnbp1b ENSDARG00000055206 64 2.764 0.844 - - - - 0.951 0.969 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
18. lhx1a ENSDARG00000014018 958 2.754 0.893 - - - - 0.910 0.951 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
19. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.708 0.889 - - - - 0.918 0.901 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
20. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 2.682 0.892 - - - - 0.900 0.890 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
21. scrt1a ENSDARG00000100821 2687 2.646 0.788 0.944 - - - 0.914 - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
22. cdk5r1b ENSDARG00000045087 2075 2.638 - 0.810 - - - 0.873 0.955 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
23. INA INA 950 2.635 - 0.809 - - - 0.865 0.961 - -
24. EPB41L1 EPB41L1 1896 2.631 0.742 - - - - 0.960 0.929 - -
25. nhlh2 ENSDARG00000025495 1860 2.63 0.968 - - - - 0.918 0.744 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
26. si:dkey-28b4.8 ENSDARG00000002840 1277 2.628 - - - - 0.936 0.863 0.829 - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
27. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 2.627 0.893 - - - - 0.944 0.790 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
28. dbx1a ENSDARG00000086393 3161 2.608 0.822 - - - - 0.821 0.965 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
29. fgf13b ENSDARG00000056633 455 2.606 - 0.823 - - - 0.875 0.908 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
30. grin1a ENSDARG00000027828 1327 2.593 0.870 - - - - 0.900 0.823 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
31. slc8a2b ENSDARG00000100592 598 2.586 0.737 - - - - 0.967 0.882 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
32. lrrc4.1 ENSDARG00000069402 323 2.576 0.931 - - - - 0.755 0.890 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
33. syt12 ENSDARG00000101776 215 2.574 0.915 - - - - 0.882 0.777 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
34. rbfox3 rbfox3 1443 2.559 0.725 - - - - 0.921 0.913 - -
35. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.553 - 0.960 - - - 0.817 0.776 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
36. mb21d2a mb21d2a 421 2.538 - - - 0.759 - 0.849 0.930 - -
37. slc18a3a ENSDARG00000006356 1285 2.535 - - - - 0.905 0.798 0.832 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
38. WNK2 ENSDARG00000104989 429 2.523 0.865 - - - - 0.795 0.863 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
39. PPP2R5B ENSDARG00000054931 213 2.522 0.908 - - - - 0.879 0.735 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
40. tmie ENSDARG00000069423 305 2.519 0.826 - - - - 0.893 0.800 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
41. slc35g2b ENSDARG00000045447 378 2.511 0.853 - - - - 0.908 0.750 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
42. CABZ01111990.1 CABZ01111990.1 4374 2.507 0.763 - - - - 0.886 0.858 - -
43. tuba1c ENSDARG00000055216 8384 2.507 0.832 - - - - 0.788 0.887 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
44. SLC35F4 ENSDARG00000103124 55 2.506 0.828 - - - - 0.727 0.951 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
45. dpysl3 ENSDARG00000002587 4381 2.5 0.753 - - - - 0.875 0.872 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
46. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 2.497 0.745 - - 0.835 - 0.917 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
47. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.493 0.884 - - 0.788 - 0.821 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
48. tmeff1b ENSDARG00000056740 11253 2.489 - - - 0.772 - 0.859 0.858 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
49. gfap ENSDARG00000025301 5584 2.482 0.856 - - - - 0.745 0.881 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
50. cadpsb ENSDARG00000070567 458 2.48 0.785 - - - - 0.899 0.796 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
51. ctnnd2b ENSDARG00000003779 964 2.48 0.839 - - - - 0.882 0.759 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
52. skor1b ENSDARG00000062448, ENSDARG00000112341 282 2.478 0.795 - - - - 0.739 0.944 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
53. nova2 ENSDARG00000017673 7685 2.476 0.844 - - - - 0.858 0.774 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
54. fbxo41 ENSDARG00000078908 95 2.475 0.797 - - - - 0.909 0.769 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
55. SPOCK1 ENSDARG00000074644 794 2.473 0.717 - - - - 0.926 0.830 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
56. celf4 ENSDARG00000070045 1537 2.472 0.736 - - - - 0.937 0.799 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
57. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 2.462 0.758 - - - - 0.862 0.842 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
58. TMEM151A ENSDARG00000077986 78 2.462 - 0.778 - - - 0.765 0.919 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
59. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.455 - 0.818 - - - 0.746 0.891 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
60. sox21b ENSDARG00000008540 1460 2.447 0.821 - - 0.797 - - 0.829 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
61. tmem59l ENSDARG00000003655 1536 2.439 0.810 - - - - 0.871 0.758 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
62. pax6b ENSDARG00000045936 349 2.436 - 0.790 - - - 0.768 0.878 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
63. MAPK8IP1_1 MAPK8IP1_1 186 2.435 0.742 - - - - 0.784 0.909 - -
64. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.431 - 0.723 - - - 0.754 0.954 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
65. clvs2 ENSDARG00000053122 1390 2.429 0.797 0.867 - - - - 0.765 - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
66. nova1 ENSDARG00000020178 4129 2.429 - 0.712 - - - 0.782 0.935 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
67. sypb ENSDARG00000002230 262 2.427 0.710 - - - - 0.807 0.910 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
68. SPTBN4_1 ENSDARG00000092624 473 2.426 - - - 0.744 - 0.927 0.755 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
69. snap25a ENSDARG00000020609 4537 2.423 0.741 - - - - 0.798 0.884 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
70. STMN3 ENSDARG00000038465 1009 2.416 0.810 - - - - 0.715 0.891 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
71. slc32a1 ENSDARG00000059775 1092 2.409 0.740 - - - - 0.760 0.909 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
72. nrarpb ENSDARG00000018958 6225 2.399 0.917 - - - - 0.701 0.781 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
73. scrt2 ENSDARG00000056175 4331 2.399 0.706 - - - - 0.751 0.942 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
74. amph ENSDARG00000007663 599 2.399 0.775 - - - - 0.705 0.919 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
75. gphnb ENSDARG00000100851 118 2.393 0.826 - - - - 0.788 0.779 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
76. neurog1 ENSDARG00000056130 3924 2.386 0.718 - - - - 0.855 0.813 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
77. mapk12b ENSDARG00000006409 2246 2.381 0.825 - - 0.719 - - 0.837 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
78. epha4b ENSDARG00000011600 3110 2.379 0.712 - - - - 0.834 0.833 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
79. BSN_1 BSN_1 21 2.366 0.798 - - - - 0.705 0.863 - -
80. vamp1 ENSDARG00000031283 3094 2.357 0.722 0.751 - - - 0.884 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
81. CHRNB4 ENSDARG00000101677 128 2.352 0.799 - - - - 0.779 0.774 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
82. nes ENSDARG00000088805 2710 2.352 0.900 - - - - 0.730 0.722 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
83. cplx2l ENSDARG00000018997 3975 2.351 0.740 0.703 - - - - 0.908 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
84. nt5c1ba ENSDARG00000018153 31 2.35 - 0.798 - - - 0.811 0.741 - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
85. TUBB8P7_1 TUBB8P7_1 2722 2.35 - 0.734 - - - 0.806 0.810 - -
86. AGO1 ENSDARG00000092644 4521 2.341 0.713 - - - - 0.840 0.788 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
87. si:ch73-21g5.7 ENSDARG00000093156 9412 2.335 0.724 - - 0.793 - - 0.818 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
88. wasf3 wasf3 3287 2.333 - - - - 0.903 0.718 0.712 - -
89. dpysl5b ENSDARG00000059311 600 2.327 0.717 - - - - 0.900 0.710 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
90. hoxc4a ENSDARG00000070338 1382 2.298 0.727 - - - - 0.728 0.843 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
91. DTX3 DTX3 303 2.297 - 0.775 - 0.737 - 0.785 - - -
92. fam49a ENSDARG00000006672 939 2.295 - - - 0.745 - 0.792 0.758 - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
93. tmem35 ENSDARG00000052567 5685 2.291 0.731 - - - - 0.841 0.719 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
94. syt3 ENSDARG00000075830 430 2.278 - - - 0.717 - 0.802 0.759 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
95. CHL1 CHL1 1553 2.274 0.707 - - - - 0.801 0.766 - -
96. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.273 - 0.846 - 0.709 - - 0.718 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
97. EFCC1 ENSDARG00000077826 1359 2.234 0.747 - - - - 0.725 0.762 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
98. rbfox1 ENSDARG00000014746 2808 2.231 0.706 - - - - 0.757 0.768 - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
99. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.217 0.720 - - - - 0.749 0.748 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
100. pcdh1gc5 ENSDARG00000104826 10052 2.211 - - 0.710 - - 0.716 0.785 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]

There are 2474 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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