Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cdh23

Gene Name Gene ID Reads Annotation
cdh23 ENSDARG00000007561, ENSDARG00000094454 3 cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]










Genes with expression patterns similar to cdh23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 2 1.000 - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
2. twsg1b 7 2 1.000 - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
3. usp53b ENSDARG00000076499 16 1.728 0.728 - - 1.000 - - - - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
4. spp1 ENSDARG00000044276 34 1 1.000 - - - - - - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
5. si:dkey-148d16.5 ENSDARG00000096782 0 1 - - - 1.000 - - - - - si:dkey-148d16.5 [Source:ZFIN;Acc:ZDB-GENE-130603-77]
6. gltpb ENSDARG00000077962 5 1 - - - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
7. OSCP1 ENSDARG00000101888 59 1 1.000 - - - - - - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
8. cog6 ENSDARG00000103149 39 1 - - - 1.000 - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
9. nts ENSDARG00000057887 5 1 - - - 1.000 - - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
10. ZACN ZACN 502 1 1.000 - - - - - - - -
11. ascl1b ENSDARG00000009702, ENSDARG00000101628 1 1 - - - 1.000 - - - - - achaete-scute family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-980526-174]
12. RNH1 ENSDARG00000086631 0 1 - - - 1.000 - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
13. PLCG2 ENSDARG00000068763 11 1 - - - 1.000 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
14. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
15. CR769782.1 CR769782.1 8 1 - - - 1.000 - - - - -
16. diaph2 ENSDARG00000076060 26 1 - - - 1.000 - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
17. si:dkey-25o1.2 si:dkey-25o1.2 86 1 - - - 1.000 - - - - -
18. ftr09 ENSDARG00000095345 0 1 - - - 1.000 - - - - - finTRIM family, member 9 [Source:ZFIN;Acc:ZDB-GENE-070912-223]
19. si:rp71-26b20.1 si:rp71-26b20.1 11 1 1.000 - - - - - - - -
20. CU183952.2 CU183952.2 6 1 - - - 1.000 - - - - -
21. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - 1.000 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
22. foxe1 ENSDARG00000079266 6 1 1.000 - - - - - - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
23. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - 1.000 - - - - -
24. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - 1.000 - - - - - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
25. si:ch211-202h22.7 ENSDARG00000073912 18 1 1.000 - - - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
26. MFAP4 ENSDARG00000090783 8 1 - - - 1.000 - - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
27. HIST1H4H HIST1H4H 26 1 - - - 1.000 - - - - -
28. CDC42EP1 CDC42EP1 50 1 1.000 - - - - - - - -
29. cd4 cd4 4 1 - - - 1.000 - - - - -
30. CR354426.1 CR354426.1 25 1 1.000 - - - - - - - -
31. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 1.000 - - - - - - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
32. CR848025.1 ENSDARG00000100501 35 1 - - - 1.000 - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
33. ccbe1 ENSDARG00000086158 0 1 - - - 1.000 - - - - - collagen and calcium binding EGF domains 1 [Source:ZFIN;Acc:ZDB-GENE-090506-7]
34. adck4 7 1 - - - 1.000 - - - - - aarF domain containing kinase 4, transcript variant X2
35. egln3 ENSDARG00000032553 280 1 1.000 - - - - - - - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
36. rtn4rl2b ENSDARG00000037495 11 1 1.000 - - - - - - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
37. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
38. CDKN2B CDKN2B 5 1 1.000 - - - - - - - -
39. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - 1.000 - - - - -
40. wu:fb63c12 26 1 1.000 - - - - - - - - wu:fb63c12
41. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - 1.000 - - - - -
42. loxhd1b ENSDARG00000074638 6 1 - - - 1.000 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
43. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
44. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - - - 1.000 - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
45. zgc:193682 zgc:193682 15 1 1.000 - - - - - - - -
46. itga2b ENSDARG00000018687 0 1 - - - 1.000 - - - - - integrin, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-051031-1]
47. si:ch211-213i16.3 2 1 1.000 - - - - - - - - si:ch211-213i16.3, transcript variant X1
48. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -
49. tusc3 ENSDARG00000078854 4 1 - - - 1.000 - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
50. pla2g4a pla2g4a 7 1 1.000 - - - - - - - -
51. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
52. ZNF337_11 ZNF337_11 11 1 - - - 1.000 - - - - -
53. nfixa ENSDARG00000043226 14 1 - - - 1.000 - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
54. si:dkey-183p4.10 ENSDARG00000077907 5 1 - - - 1.000 - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
55. SNORD35_1 SNORD35_1 0 1 - - - 1.000 - - - - -
56. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
57. ampd2 ampd2 6 1 - - - 1.000 - - - - -
58. DOK2 ENSDARG00000075818 8 1 1.000 - - - - - - - - docking protein 2 [Source:ZFIN;Acc:ZDB-GENE-080721-4]
59. or115-1 ENSDARG00000018521 1 1 - - - 1.000 - - - - - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
60. abhd12 ENSDARG00000071004 47 1 1.000 - - - - - - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
61. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - 1.000 - - - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
62. AP1S3 AP1S3 8 1 1.000 - - - - - - - -
63. U5 U5 0 1 - - - 1.000 - - - - -
64. CABZ01025394.1 CABZ01025394.1 1 1 - - - 1.000 - - - - -
65. si:dkey-13d5.1 si:dkey-13d5.1 3 1 1.000 - - - - - - - -
66. chrm2a ENSDARG00000098612 5 1 - - - 1.000 - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
67. zgc:173713 17 1 - - - 1.000 - - - - - zgc:173713, transcript variant X2
68. si:ch73-266f23.3 ENSDARG00000096120 1 1 - - - 1.000 - - - - - si:ch73-266f23.3 [Source:ZFIN;Acc:ZDB-GENE-110914-182]
69. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
70. armc2 ENSDARG00000022660 3 1 - - - 1.000 - - - - - armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
71. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - - - 1.000 - - - - -
72. KCNJ15 ENSDARG00000058988 18 1 1.000 - - - - - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
73. CR339051.1 CR339051.1 9 1 1.000 - - - - - - - -
74. si:ch211-262n1.5 12 1 - - - 1.000 - - - - - si:ch211-262n1.5
75. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
76. EHD2 EHD2 23 1 1.000 - - - - - - - -
77. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - 1.000 - - - - -
78. mir199-2 mir199-2 38 1 1.000 - - - - - - - -
79. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - 1.000 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
80. SLC22A23_2 SLC22A23_2 0 1 - - - 1.000 - - - - -
81. BRSK2_2 BRSK2_2 3 1 - - - 1.000 - - - - -
82. ACSL6 12 1 1.000 - - - - - - - - acyl-CoA synthetase long-chain family member 6
83. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - 1.000 - - - - -
84. ppp4r1 ENSDARG00000101316 1 1 - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
85. U6_8 U6_8 6 1 1.000 - - - - - - - -
86. tmem117 ENSDARG00000088356 0 1 - - - 1.000 - - - - - transmembrane protein 117 [Source:ZFIN;Acc:ZDB-GENE-040426-2809]
87. DHPS ENSDARG00000003270 85 1 1.000 - - - - - - - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
88. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
89. ARAP1 3 1 1.000 - - - - - - - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
90. ydjc ENSDARG00000062655 5 1 - - - 1.000 - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
91. mhc1zaa ENSDARG00000092162 2 1 - - - 1.000 - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
92. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - - 1.000 - - - - -
93. gbgt1l1 ENSDARG00000025275 21 1 1.000 - - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
94. dio2 ENSDARG00000094857 17 1 - - - 1.000 - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
95. si:dkey-233h12.3 si:dkey-233h12.3 4 1 1.000 - - - - - - - -
96. xrra1 ENSDARG00000089578 18 1 - - - 1.000 - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
97. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
98. mtmr10 ENSDARG00000010601 37 1 1.000 - - - - - - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
99. IMPG2 IMPG2 1 1 - - - 1.000 - - - - -
100. LRCH4 ENSDARG00000068258 22 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]

There are 296 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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