Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ccdc129

Gene Name Gene ID Reads Annotation
ccdc129 37 coiled-coil domain containing 129, transcript variant X2










Genes with expression patterns similar to ccdc129

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ccdc129 37 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 129, transcript variant X2
2. matn3a ENSDARG00000069245 2410 2 1.000 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
3. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 2 1.000 1.000 - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
4. MSH4 ENSDARG00000075826 37 2 1.000 1.000 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
5. echdc1 68 2 1.000 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
6. si:ch211-195i24.1 si:ch211-195i24.1 10 2 1.000 1.000 - - - - - - -
7. zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 1.923 - 1.000 - - - - 0.923 - - zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]
8. zgc:175280 ENSDARG00000099111 71 1.91 - 1.000 0.910 - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
9. ATXN1 ATXN1 12 1.91 0.910 1.000 - - - - - - -
10. ankrd33aa ENSDARG00000055638 6 1.896 - 1.000 - - - - - 0.896 - ankyrin repeat domain 33Aa [Source:ZFIN;Acc:ZDB-GENE-080520-2]
11. rasl12 ENSDARG00000002701 66 1.89 - 1.000 - - - - 0.890 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
12. CABZ01056052.1 ENSDARG00000110748 3 1.889 - 1.000 - - 0.889 - - - -
13. FP103005.1 ENSDARG00000099852 4 1.869 - - - - 0.869 1.000 - - -
14. CABZ01081752.1 ENSDARG00000099245 84 1.862 - 1.000 - - - - 0.862 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]
15. si:ch1073-185p12.2 ENSDARG00000100199 7 1.859 - 1.000 - - - 0.859 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
16. C12H17orf70 C12H17orf70 25 1.859 - 1.000 - - - 0.859 - - -
17. ptpn20 ENSDARG00000075459 1 1.859 1.000 - - - - 0.859 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
18. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1.859 - 1.000 - - - 0.859 - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
19. aven ENSDARG00000002894 49 1.859 1.000 - - - - 0.859 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
20. carm1l ENSDARG00000091531 13 1.859 1.000 - - - - 0.859 - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
21. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1.859 1.000 - - - - 0.859 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
22. RNF214_1 RNF214_1 5 1.85 1.000 - - - 0.850 - - - -
23. si:ch211-281p14.2 22 1.85 - 1.000 0.850 - - - - - - si:ch211-281p14.2, transcript variant X2
24. SNORD36_1 SNORD36_1 44 1.834 - - 0.968 - - - 0.866 - -
25. CU655961.3 ENSDARG00000106724 14 1.82 - 1.000 - - 0.820 - - - -
26. cadpsa ENSDARG00000043661 160 1.808 - 0.881 - - - - 0.927 - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
27. lppr5b lppr5b 23 1.803 - - - - 0.854 - 0.949 - -
28. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1.778 - 0.919 - - - 0.859 - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
29. si:ch211-218c6.9 si:ch211-218c6.9 40 1.775 - - - - - 0.859 0.916 - -
30. gas8 ENSDARG00000101431 140 1.763 - 0.857 - - - - 0.906 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
31. rcv1 rcv1 77 1.759 - 1.000 - - - 0.759 - - -
32. dhcr24 ENSDARG00000013236 61 1.751 0.751 1.000 - - - - - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
33. cabp2a ENSDARG00000052016 19 1.751 0.751 1.000 - - - - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
34. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1.751 0.751 1.000 - - - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
35. ankar ENSDARG00000000516 3 1.734 - 1.000 - - - - - - 0.734 ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
36. CABZ01072557.1 CABZ01072557.1 9 1.729 1.000 0.729 - - - - - - -
37. atp8b5a ENSDARG00000062040 1 1.728 - - - - 0.869 0.859 - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
38. itga11b ENSDARG00000007950 17 1.724 - - - - 0.869 - 0.855 - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
39. si:dkey-220k22.3 ENSDARG00000094693 166 1.722 0.722 1.000 - - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
40. KRT18_1 KRT18_1 17 1.721 1.000 - - - - - 0.721 - -
41. eno1b ENSDARG00000013750 63 1.716 0.796 - - - - - 0.920 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
42. Metazoa_SRP_30 Metazoa_SRP_30 10 1.712 - 0.712 - - - 1.000 - - -
43. ANO7 ANO7 54 1.707 1.000 - 0.707 - - - - - -
44. CDHR2_1 CDHR2_1 12 1.69 - - 0.821 - 0.869 - - - -
45. wu:fi34b01 38 1.678 - 0.729 - - - - 0.949 - - wu:fi34b01
46. CU633740.1 CU633740.1 8 1.657 - 0.953 - - - - - - 0.704
47. UNC13A UNC13A 36 1.656 - 0.721 - - - 0.935 - - -
48. fer ENSDARG00000012196 83 1.656 - - 0.729 - - - 0.927 - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
49. si:ch73-111e15.1 ENSDARG00000008182 2 1.654 - - - - 0.795 0.859 - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
50. cdh13 ENSDARG00000014215 106 1.643 - - - - - 0.763 0.880 - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
51. emc4_1 ENSDARG00000039268 443 1.64 - 0.747 - - 0.893 - - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
52. pigm ENSDARG00000024277 86 1.623 0.732 - - - - - 0.891 - - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
53. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1.615 - 0.747 0.868 - - - - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
54. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1.606 - 0.747 - - - 0.859 - - -
55. cyr61l2 ENSDARG00000099985 725 1.555 - 0.787 - - - 0.768 - - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
56. slc27a2b 72 1.544 - - - - 0.733 - 0.811 - - solute carrier family 27 (fatty acid transporter), member 2b
57. mxd1 ENSDARG00000032039 36 1.522 - 0.779 - - - - - 0.743 - MAX dimerization protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-246]
58. dscama ENSDARG00000024865 75 1.506 - 0.712 - - - - 0.794 - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
59. CDH12_1 CDH12_1 57 1.493 - 0.712 - - - 0.781 - - -
60. thraa ENSDARG00000000151 148 1.479 - 0.744 - - - - 0.735 - - thyroid hormone receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-990415-263]
61. CDH12 CDH12 44 1.479 0.732 0.747 - - - - - - -
62. plekhm1 ENSDARG00000099954, ENSDARG00000114703 545 1.454 - - - - - 0.734 0.720 - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2752]
63. loxhd1a ENSDARG00000094738 7 1 - 1.000 - - - - - - - lipoxygenase homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-091112-20]
64. heyl ENSDARG00000055798, ENSDARG00000112770 76 1 - 1.000 - - - - - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
65. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
66. si:ch73-62b13.1 ENSDARG00000093269 11 1 - 1.000 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
67. C25H12orf29 C25H12orf29 31 1 - 1.000 - - - - - - -
68. BX323793.2 BX323793.2 61 1 - 1.000 - - - - - - -
69. pcdh8 ENSDARG00000006467 317 1 - 1.000 - - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
70. CR933820.2 CR933820.2 152 1 - 1.000 - - - - - - -
71. npffr2.1 npffr2.1 60 1 - 1.000 - - - - - - -
72. U11 U11 11 1 - 1.000 - - - - - - -
73. CU207301.2 ENSDARG00000097677 2 1 - 1.000 - - - - - - -
74. CABZ01117437.1 CABZ01117437.1 11 1 - 1.000 - - - - - - -
75. im:7151068 im:7151068 2 1 - 1.000 - - - - - - -
76. CT027674.1 ENSDARG00000106606 11 1 - 1.000 - - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
77. SLC35A3_1 SLC35A3_1 35 1 1.000 - - - - - - - -
78. VMAC ENSDARG00000110997 2 1 - 1.000 - - - - - - - vimentin type intermediate filament associated coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:33803]
79. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
80. ano8a ENSDARG00000076265 20 1 - 1.000 - - - - - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
81. GPR139 14 1 - - - - - 1.000 - - - G protein-coupled receptor 139, transcript variant X1
82. PNPLA2 ENSDARG00000089390 0 1 - 1.000 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
83. si:ch1073-170o4.1 ENSDARG00000092780 18 1 - 1.000 - - - - - - - si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
84. CR628323.3 ENSDARG00000106158 1 1 - 1.000 - - - - - - - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
85. BX511182.1 BX511182.1 8 1 1.000 - - - - - - - -
86. si:ch211-142k18.1 1 1 1.000 - - - - - - - - si:ch211-142k18.1
87. mamdc2a ENSDARG00000098345 21 1 - 1.000 - - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
88. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
89. GABRR1 ENSDARG00000043902 71 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
90. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
91. si:ch211-190k17.13 si:ch211-190k17.13 48 1 - - - - - 1.000 - - -
92. dnm2a ENSDARG00000069937 32 1 1.000 - - - - - - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
93. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 1.000 - - - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
94. bcl3 ENSDARG00000087832 69 1 - - - - - 1.000 - - - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
95. CABZ01087025.1 ENSDARG00000117232 10 1 - 1.000 - - - - - - -
96. si:ch211-120c15.3 ENSDARG00000101807 19 1 - 1.000 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
97. mir30b 4 1 - 1.000 - - - - - - - microRNA 30b
98. BX004994.2 BX004994.2 17 1 1.000 - - - - - - - -
99. gc2 ENSDARG00000018329 0 1 - 1.000 - - - - - - - guanylyl cyclase 2 [Source:ZFIN;Acc:ZDB-GENE-011128-8]
100. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - 1.000 - - - - - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]

There are 1232 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA