Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ascl1a

Gene Name Gene ID Reads Annotation
ascl1a ENSDARG00000038386 1290 achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]










Genes with expression patterns similar to ascl1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ascl1a ENSDARG00000038386 1290 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
2. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 3.187 - 0.855 - - 0.707 - 0.832 - 0.793 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
3. olig2 ENSDARG00000040946 1405 2.683 - 0.856 - - - 0.903 0.924 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
4. mnx2a ENSDARG00000042106 939 2.683 - 0.927 - - - 0.839 0.917 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
5. nkx6.1 ENSDARG00000022569 3779 2.646 - 0.825 - - - 0.925 0.896 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
6. ADAMTS3 ENSDARG00000060127 2839 2.624 - 0.884 - - - 0.843 0.897 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
7. SSX2IP SSX2IP 316 2.603 - 0.877 - - - 0.818 0.908 - -
8. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.564 - 0.847 - - - - 0.914 - 0.803 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
9. fabp7a ENSDARG00000007697 5211 2.51 - - - - 0.798 0.840 0.872 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
10. BX247898.1 BX247898.1 75 2.501 - 0.766 - - - 0.784 0.951 - -
11. nkx2.9 ENSDARG00000020332 357 2.496 - 0.823 - - - 0.742 0.931 - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
12. SLC5A7 SLC5A7 453 2.48 - 0.864 - - - 0.845 0.771 - -
13. CU928222.1 ENSDARG00000097436 1662 2.466 - 0.891 - - - 0.731 0.844 - -
14. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 2.453 - 0.776 - - - - 0.851 - 0.826 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
15. CABZ01080599.2 CABZ01080599.2 192 2.451 - 0.781 - - - 0.796 0.874 - -
16. CABZ01029738.1 CABZ01029738.1 327 2.436 - 0.862 - - - 0.816 0.758 - -
17. nes ENSDARG00000088805 2710 2.429 - 0.812 - - - 0.755 0.862 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
18. vezf1a ENSDARG00000008247 1449 2.424 - - - - 0.744 - 0.876 - 0.804 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
19. dla ENSDARG00000010791 9281 2.368 - 0.836 - - - - 0.787 - 0.745 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
20. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 2.365 0.791 - - 0.781 - - - 0.793 - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
21. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.364 - 0.768 - - - - 0.851 0.745 - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
22. cspg5a ENSDARG00000069981 1699 2.351 - 0.780 0.744 - - - 0.827 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
23. neurog1 ENSDARG00000056130 3924 2.339 - 0.797 - 0.768 - - 0.774 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
24. mapk11 ENSDARG00000045836 846 2.331 - 0.823 - - - - 0.730 0.778 - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
25. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 2.323 - 0.753 - - - 0.707 0.863 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
26. nhlh2 ENSDARG00000025495 1860 2.32 - 0.766 - - - - 0.847 - 0.707 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
27. urp2 ENSDARG00000067781 85 2.318 - 0.702 - - - 0.726 0.890 - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
28. si:ch73-21g5.7 ENSDARG00000093156 9412 2.306 - 0.812 0.705 - - - 0.789 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
29. ctnnd2b ENSDARG00000003779 964 2.303 - - 0.703 0.762 - - 0.838 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
30. CABZ01028287.1 CABZ01028287.1 626 2.301 - - - 0.743 - - 0.814 - 0.744
31. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.297 - 0.777 - - - - 0.739 - 0.781 LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
32. calca ENSDARG00000056590 150 2.265 - 0.752 - - - 0.738 0.775 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
33. wu:fq41a10 wu:fq41a10 7009 2.258 - 0.810 - 0.729 - - 0.719 - -
34. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.247 0.727 - - - - - 0.766 - 0.754 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
35. gap43 ENSDARG00000099744 4114 2.243 - 0.731 - - - - 0.771 - 0.741 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
36. si:dkey-164n2.1 47 1.861 0.944 0.917 - - - - - - - si:dkey-164n2.1, transcript variant X1
37. atp1b4 ENSDARG00000053262 1337 1.837 - 0.980 - - - - 0.857 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
38. tmem240 tmem240 180 1.792 - - - - - 0.826 0.966 - -
39. st18 663 1.781 - 0.917 - - - - 0.864 - - suppression of tumorigenicity 18, zinc finger
40. sst1.1 ENSDARG00000040799 677 1.777 - - - - - 0.819 0.958 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
41. RAB39B RAB39B 482 1.776 - 0.853 - - - - 0.923 - -
42. nmnat2 ENSDARG00000004580 370 1.775 - 0.863 - - - - 0.912 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
43. her15.2 her15.2 1701 1.774 - 0.854 - - - - 0.920 - -
44. C22H19orf26 C22H19orf26 66 1.774 0.928 - - - - - 0.846 - -
45. atp2b3b ENSDARG00000023445 1424 1.774 - 0.873 - - - - 0.901 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
46. nkx2.2a ENSDARG00000053298 747 1.768 - - - - - 0.947 0.821 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
47. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1.762 0.928 - - - - - 0.834 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
48. si:ch73-265d7.2 ENSDARG00000116713 2142 1.761 - - - - - 0.916 0.845 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
49. gpr98 gpr98 717 1.76 - - - - - 0.880 0.880 - -
50. ptprnb ENSDARG00000077047 2743 1.757 - 0.840 - - - - 0.917 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
51. pkd2l1 ENSDARG00000022503 372 1.755 - - - - - 0.853 0.902 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
52. CLIP3 ENSDARG00000054456 734 1.75 - 0.869 - - - - 0.881 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
53. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.75 - 0.857 - - - - 0.893 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
54. zic4 ENSDARG00000031307 1228 1.748 - 0.840 - - - - 0.908 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
55. plekhg7 ENSDARG00000062855 308 1.745 0.940 - - - - - 0.805 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
56. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.74 - 0.921 - - - - 0.819 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
57. atpv0e2 ENSDARG00000059057 585 1.738 - 0.843 - - - - 0.895 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
58. cnrip1b ENSDARG00000037337 39 1.731 - - - - - 0.897 0.834 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
59. ENTHD1 ENTHD1 235 1.718 - - - - - 0.877 0.841 - -
60. mapre3a ENSDARG00000020231 100 1.715 - 0.854 - - - 0.861 - - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
61. mpped2 ENSDARG00000034443, ENSDARG00000114674 527 1.713 - 0.909 - - - - 0.804 - - metallophosphoesterase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8903]
62. adam23a ENSDARG00000062323 580 1.712 - 0.820 - - - - 0.892 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
63. itm2ca ENSDARG00000043448 1265 1.709 - 0.910 - - - - 0.799 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
64. lingo2 lingo2 67 1.708 - - - - - 0.805 0.903 - -
65. prtgb ENSDARG00000040442 12365 1.705 0.831 - - - - 0.874 - - - protogenin homolog b (Gallus gallus) [Source:ZFIN;Acc:ZDB-GENE-060302-1]
66. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.702 - 0.807 - - - - 0.895 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
67. scn1lab ENSDARG00000062744 155 1.702 - 0.854 - - - - 0.848 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
68. trim46b ENSDARG00000058649 54 1.695 - - - - - 0.958 0.737 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
69. sox2 ENSDARG00000070913 2763 1.694 - 0.862 - - - - 0.832 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
70. pcdh1gc5 ENSDARG00000104826 10052 1.689 - 0.826 - - - - 0.863 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
71. slc35g2b ENSDARG00000045447 378 1.686 - 0.806 - - - - 0.880 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
72. lrrc4bb ENSDARG00000014792 47 1.68 - - - - - 0.952 0.728 - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
73. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.679 - 0.791 - - - - 0.888 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
74. GATAD2B ENSDARG00000005834 3855 1.676 0.910 - - - - - - - 0.766 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
75. lrrc24 ENSDARG00000101704 224 1.675 0.915 0.760 - - - - - - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
76. kif5c ENSDARG00000076027 424 1.675 - - - - - 0.815 0.860 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
77. cacna2d3 ENSDARG00000078760 211 1.675 - 0.823 - - - - 0.852 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
78. INSM2 ENSDARG00000020655 122 1.665 - - - - - 0.769 0.896 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
79. sox21b ENSDARG00000008540 1460 1.665 - 0.900 - - - - 0.765 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
80. drd2a ENSDARG00000056926 40 1.665 - - - - - 0.831 0.834 - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
81. zgc:113531 ENSDARG00000038794 2063 1.664 - - - - - 0.753 0.911 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
82. glipr1b ENSDARG00000030078 73 1.663 - - - - - 0.896 - - 0.767 GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
83. gfra3 ENSDARG00000087704 122 1.657 - - - - - 0.886 0.771 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
84. tmem35 ENSDARG00000052567 5685 1.656 - - - - - - 0.855 - 0.801 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
85. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.655 - 0.848 - - - - 0.807 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
86. lhfpl4a ENSDARG00000111810 206 1.65 - 0.766 - - - 0.884 - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
87. sox19b ENSDARG00000040266 532 1.647 - 0.884 - - - - 0.763 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
88. FAM171A2 FAM171A2 707 1.643 - 0.917 - - - - - 0.726 -
89. slc6a1b ENSDARG00000039647 1301 1.64 - - - - - - 0.935 - 0.705 solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
90. fbxo5 ENSDARG00000039020 1284 1.639 0.892 - - - - - - - 0.747 F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]
91. cadpsb ENSDARG00000070567 458 1.636 - 0.794 - - - - 0.842 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
92. dlb ENSDARG00000004232 5120 1.634 - 0.882 - - - - - - 0.752 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
93. clvs2 ENSDARG00000053122 1390 1.632 - - - - - - 0.857 - 0.775 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
94. thsd7a thsd7a 194 1.623 - 0.792 - - - - 0.831 - -
95. zgc:162331 ENSDARG00000069607 13 1.622 - - - - - 0.897 0.725 - - zgc:162331 [Source:ZFIN;Acc:ZDB-GENE-070410-75]
96. zgc:194665 ENSDARG00000004577 136 1.621 - 0.700 - - - - 0.921 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
97. negr1 ENSDARG00000021607 1051 1.621 - - - - - - 0.875 - 0.746 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
98. myt1b ENSDARG00000102879 5411 1.617 - 0.843 - - - - 0.774 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
99. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.614 - - - - - - 0.834 0.780 -
100. chrna2a ENSDARG00000006602 163 1.611 - 0.748 - - - - 0.863 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]

There are 2069 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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