Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arr3a

Gene Name Gene ID Reads Annotation
arr3a ENSDARG00000056511, ENSDARG00000114648 192 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]










Genes with expression patterns similar to arr3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arr3a ENSDARG00000056511, ENSDARG00000114648 192 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
2. RCVRN_1 RCVRN_1 46 3.767 - - - 0.964 0.821 - - 1.000 0.982
3. ETV3L ETV3L 67 3.626 - - - 0.819 0.822 - - 0.999 0.986
4. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 3.574 - - - 0.827 0.793 - - 0.964 0.990 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
5. si:ch211-133l5.5 si:ch211-133l5.5 123 2.892 - - - 0.897 - - - 1.000 0.995
6. saga ENSDARG00000012610 63 2.866 - - - 0.918 - - - 0.988 0.960 S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
7. slc6a2 ENSDARG00000016141 49 2.83 - - - - 0.862 - - 0.999 0.969 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
8. sagb ENSDARG00000038378 28 2.817 - - - - 0.830 - - 0.997 0.990 S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
9. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 2.799 - - - 0.851 - - - 0.995 0.953 retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
10. guca1g ENSDARG00000045737, ENSDARG00000114717 22 2.793 - - - 0.965 0.830 - - - 0.998 guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
11. rpe65a ENSDARG00000007480 52 2.742 - - - 0.969 0.796 - - - 0.977 retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
12. gnb3b ENSDARG00000002696 46 2.708 - - - 0.708 - - - 1.000 1.000 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
13. TULP1 TULP1 50 2.686 - - - 0.761 - - - 0.992 0.933
14. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 2.652 - - - - 0.802 - - 0.978 0.872 syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
15. gngt2b ENSDARG00000103543 132 1.995 - - - - - - - 1.000 0.995 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
16. NPFFR1 ENSDARG00000111997 29 1.973 - - - - - - 1.000 - 0.973 neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
17. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.964 - - - - - - - 0.997 0.967 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
18. fut9d ENSDARG00000028098 427 1.943 - - - - - - - 0.963 0.980 fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
19. grk7a ENSDARG00000020602 10 1.932 - - - 0.936 - - - - 0.996 G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
20. muc13a ENSDARG00000069559 985 1.918 - - - - - - - 0.985 0.933 mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
21. si:ch211-130m23.2 ENSDARG00000095136 121 1.912 - - - - - - - 0.982 0.930 si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
22. si:ch73-211l2.1 605 1.89 - - - - - - - 0.956 0.934 si:ch73-211l2.1
23. RAPGEF4 ENSDARG00000079872 82 1.87 - - 0.870 - - - 1.000 - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
24. dhrs9 ENSDARG00000019260 250 1.859 - - - - - - - 0.948 0.911 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
25. aanat2 ENSDARG00000079802 175 1.845 - - - - - - - 0.901 0.944 arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
26. ppp1r3da ENSDARG00000077513 109 1.836 - - - - - - - 0.936 0.900 protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
27. si:ch211-117m20.5 ENSDARG00000091996 7246 1.832 - - - - - - - 0.964 0.868 si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
28. UNC119 UNC119 104 1.826 - - - - 0.830 - - - 0.996
29. BX004785.5 BX004785.5 35 1.805 - - - - - - 0.836 - 0.969
30. zgc:163030 ENSDARG00000069192 2963 1.801 - - - - - - - 0.832 0.969 zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
31. guk1b ENSDARG00000005776 23 1.766 - - - - 0.830 - - - 0.936 guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
32. syt5b ENSDARG00000011640 70 1.758 - - - - 0.799 - - - 0.959 synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
33. ncaldb ENSDARG00000011334 123 1.743 - - - - - - - 0.896 0.847 neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
34. tgm1l4 ENSDARG00000101407 800 1.743 - - - - - - - 0.871 0.872 transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
35. rcvrna ENSDARG00000052223, ENSDARG00000113117 20 1.74 - - - 0.790 - - - - 0.950 recoverin a [Source:ZFIN;Acc:ZDB-GENE-050913-106]
36. phlda3 ENSDARG00000037804 1116 1.739 - - - - - - - 0.924 0.815 pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
37. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1.735 - - - - - - - 0.768 0.967 opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
38. scamp2l ENSDARG00000017010 491 1.732 - - - - - - - 0.838 0.894 secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
39. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 1.729 - - - - - - - 0.827 0.902 plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
40. rs1 rs1 70 1.71 - - - - 0.765 - - - 0.945
41. wdr4 ENSDARG00000090581 42 1.7 - - 0.700 - - - 1.000 - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
42. rbp4l ENSDARG00000044684 3292 1.682 - - - - - - - 0.912 0.770 retinol binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-7591]
43. ap1s3b ENSDARG00000027966 1064 1.679 - - - - - - - 0.868 0.811 adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
44. casp9 ENSDARG00000004325 306 1.672 - - - - - - - 0.942 0.730 caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
45. cyp26a1 ENSDARG00000033999 1136 1.666 - - - - - - - 0.773 0.893 cytochrome P450, family 26, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-990415-44]
46. zgc:163077 ENSDARG00000101593 60 1.657 - - 0.766 - - - - - 0.891 zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
47. CABZ01048956.1 ENSDARG00000117474 253 1.655 - - - - - - - 0.711 0.944 probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
48. fam105ba fam105ba 93 1.649 - - 0.862 - - - - - 0.787
49. fam46ba 4575 1.648 - - - - - - - 0.849 0.799 family with sequence similarity 46, member Ba
50. npy8br ENSDARG00000005780 15 1.637 - - 0.790 - - - 0.847 - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
51. otud3 ENSDARG00000022648 263 1.629 - - - - - - - 0.896 0.733 OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
52. CCDC64B CCDC64B 337 1.625 - - - - - - - 0.820 0.805
53. SLC29A4 ENSDARG00000059690 470 1.616 - - - - 0.746 - - - 0.870 solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
54. zgc:109965 ENSDARG00000012126 11 1.614 - - - 0.784 0.830 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
55. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.613 - - 0.783 - 0.830 - - - -
56. prelp ENSDARG00000070597 99 1.598 - - - - 0.830 - 0.768 - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
57. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1.593 - - - 0.795 0.798 - - - - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
58. exosc2 ENSDARG00000028688 726 1.563 - - - - - - - 0.811 0.752 exosome component 2 [Source:ZFIN;Acc:ZDB-GENE-050417-27]
59. tfap2d ENSDARG00000023272 308 1.555 - - - 0.796 0.759 - - - - transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
60. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1.552 - - 0.798 - - - - - 0.754 regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
61. Telomerase-vert Telomerase-vert 8 1.54 - - 0.710 - 0.830 - - - -
62. sh3bp5b ENSDARG00000103978 513 1.54 - - - - - - - 0.827 0.713 SH3-domain binding protein 5b (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2813]
63. si:zfos-754c12.1 si:zfos-754c12.1 89 1.503 - - 0.756 - - - 0.747 - -
64. fam131c ENSDARG00000037320 6 1.475 - - - 0.710 0.765 - - - - family with sequence similarity 131, member C [Source:ZFIN;Acc:ZDB-GENE-050706-119]
65. pax5 ENSDARG00000037383 319 1.448 - - - 0.726 0.722 - - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
66. FBLN7 ENSDARG00000089519 4 1.428 - - - 0.710 - - 0.718 - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
67. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 1 - - - - - - 1.000 - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
68. HTRA2_6 HTRA2_6 0 1 - - - - - - 1.000 - -
69. wu:fi26e04 wu:fi26e04 15 1 - - - - - - 1.000 - -
70. ENSDARG00000074422 ENSDARG00000074422 61 1 - - - - - - 1.000 - -
71. BX682234.3 BX682234.3 7 1 - - - - - - 1.000 - -
72. il1b ENSDARG00000098700 27 1 - - - - - - 1.000 - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
73. sim1b ENSDARG00000013789 47 1 - - - - - - 1.000 - - SIM bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041210-5]
74. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - 1.000 - -
75. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - 1.000 - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
76. b3galtlb b3galtlb 27 1 - - - - - - 1.000 - -
77. acta2 ENSDARG00000045180 96 1 - - - - - - 1.000 - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
78. CR942805.1 CR942805.1 94 1 - - - - - - 1.000 - -
79. hyal3 ENSDARG00000036818 23 1 - - - - - - 1.000 - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
80. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - - 1.000 - -
81. fmn1 ENSDARG00000011975 5 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
82. foxi1 ENSDARG00000104566 176 1 - - - - - - 1.000 - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
83. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - - - - 1.000 - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
84. TNS3_1 TNS3_1 8 1 - - - - - - 1.000 - -
85. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - - 1.000 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
86. TRIM14_3 TRIM14_3 7 1 - - - - - - 1.000 - -
87. ifit5 ifit5 12 1 - - - - - - 1.000 - -
88. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - 1.000 - -
89. TRIM35_3 TRIM35_3 172 1 - - - - - - 1.000 - -
90. hbaa2 ENSDARG00000069735 10 1 - - - - - - 1.000 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
91. camk1ga ENSDARG00000044526 5 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
92. U4atac U4atac 47 1 - - - - - - 1.000 - -
93. ncf2 ENSDARG00000005821 28 1 - - - - - - 1.000 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
94. spo11 ENSDARG00000013837 7 1 - - - - - - 1.000 - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
95. si:dkey-102f14.7 ENSDARG00000092255 1 1 - - - - - - 1.000 - - si:dkey-102f14.7 [Source:ZFIN;Acc:ZDB-GENE-060503-895]
96. CABZ01053483.1 CABZ01053483.1 5 1 - - - - 1.000 - - - -
97. DIP2B DIP2B 18 1 - - - - - - 1.000 - -
98. si:ch211-140o17.1 si:ch211-140o17.1 0 1 - - - - - - 1.000 - -
99. cthrc1b ENSDARG00000001971 44 1 - - - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
100. SNORA81 SNORA81 47 1 - - - - - - 1.000 - -

There are 966 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA