Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for otud3

Gene Name Gene ID Reads Annotation
otud3 ENSDARG00000022648 263 OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]










Genes with expression patterns similar to otud3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. otud3 ENSDARG00000022648 263 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
2. CD93 CD93 270 2.331 - - 0.737 - - - 0.718 0.876 -
3. gla ENSDARG00000036155, ENSDARG00000110713 228 2.229 - 0.717 - - - - 0.739 0.773 - galactosidase, alpha [Source:ZFIN;Acc:ZDB-GENE-041010-207]
4. saga ENSDARG00000012610 63 1.857 - - - - - - 0.961 0.896 - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
5. ppp1r3da ENSDARG00000077513 109 1.811 - 0.880 - - - - - 0.931 - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
6. tmem187 ENSDARG00000051989 136 1.798 - - - 0.843 - - 0.955 - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
7. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 1.778 - 0.938 - 0.840 - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
8. irak4 ENSDARG00000100534 108 1.771 - - - 0.836 - - 0.935 - - interleukin-1 receptor-associated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-738]
9. si:ch211-229b6.1 ENSDARG00000093422 151 1.769 - - - - - - 0.918 0.851 - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
10. slc35f2 ENSDARG00000069745, ENSDARG00000110521 260 1.759 - - - - - - 0.937 0.822 - solute carrier family 35, member F2 [Source:ZFIN;Acc:ZDB-GENE-030131-5516]
11. STARD4 ENSDARG00000102477 411 1.753 - - - - - - 0.905 0.848 - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
12. tctex1d1 ENSDARG00000103545 409 1.737 - 0.896 - - - - - 0.841 - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
13. abca4a ENSDARG00000057169 27 1.718 - - - - - - 0.974 - 0.744 ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
14. anapc15 ENSDARG00000101285 391 1.711 0.837 - - - - - - 0.874 - anaphase promoting complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-060825-43]
15. zgc:165481 ENSDARG00000060092 95 1.711 - - 0.836 - - - - 0.875 - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
16. MTHFS ENSDARG00000104487 770 1.698 - - - - - - 0.898 0.800 - 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:ZFIN;Acc:ZDB-GENE-130103-5]
17. ft1 ENSDARG00000059056 102 1.698 - - - - - - 0.830 0.868 - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
18. aldh3a2a ENSDARG00000028259 591 1.694 - - - - - - 0.865 0.829 - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
19. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.687 - 0.909 - - - - - 0.778 - phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
20. ptpn6 ENSDARG00000089043 168 1.685 - - - - 0.814 - - 0.871 - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
21. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 1.68 - - - - - 0.848 0.832 - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
22. b3gnt3.1 ENSDARG00000043482 1991 1.674 - - - 0.786 - - - 0.888 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040625-129]
23. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 1.67 - 0.784 - - - - - 0.886 - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
24. crim1 ENSDARG00000029668 118 1.669 - 0.790 - - - - - 0.879 - cysteine rich transmembrane BMP regulator 1 (chordin-like) [Source:ZFIN;Acc:ZDB-GENE-040312-2]
25. adhfe1 ENSDARG00000053518 499 1.665 - - - 0.808 - - - 0.857 - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
26. RIBC2 ENSDARG00000075177 445 1.661 - 0.922 - - - 0.739 - - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
27. CR848664.3 CR848664.3 183 1.661 - 0.864 - - - - - - 0.797
28. slc30a10 ENSDARG00000103983 46 1.66 - - - - - - 0.933 - 0.727 solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
29. KCNK3 KCNK3 115 1.659 - 0.866 - 0.793 - - - - -
30. RCVRN_1 RCVRN_1 46 1.646 - - - - - - - 0.894 0.752
31. atp2b1b ENSDARG00000007788 56 1.646 - - 0.773 - - - - 0.873 - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
32. ETV3L ETV3L 67 1.644 - - - - - - - 0.894 0.750
33. BX004785.5 BX004785.5 35 1.642 - 0.904 - - - - - - 0.738
34. SPA17 ENSDARG00000069361 141 1.641 - - - 0.826 - - 0.815 - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
35. si:ch211-133l5.5 si:ch211-133l5.5 123 1.641 - - - - - - - 0.894 0.747
36. pcmtl ENSDARG00000042848, ENSDARG00000110149 301 1.638 - 0.916 - 0.722 - - - - - l-isoaspartyl protein carboxyl methyltransferase, like [Source:ZFIN;Acc:ZDB-GENE-040426-1738]
37. gngt2b ENSDARG00000103543 132 1.638 - - - - - - - 0.895 0.743 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
38. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 1.637 - 0.846 - - 0.791 - - - -
39. rnf41l ENSDARG00000073918 329 1.633 - - 0.815 - - - - - 0.818 ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
40. BX004890.2 BX004890.2 84 1.631 - 0.876 0.755 - - - - - -
41. FAM98C FAM98C 225 1.629 - - - - 0.770 - - 0.859 -
42. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1.629 - - - - - - - 0.896 0.733 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
43. rnh1 ENSDARG00000086631 14 1.628 - 0.892 - - - - - - 0.736 ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
44. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.627 - 0.883 - - 0.744 - - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
45. sagb ENSDARG00000038378 28 1.627 - - - - - - - 0.892 0.735 S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
46. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 1.626 - - - 0.799 - - 0.827 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
47. ap1s3b ENSDARG00000027966 1064 1.625 - - - - - - - 0.858 0.767 adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
48. gnb3b ENSDARG00000002696 46 1.624 - - - - - - - 0.894 0.730 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
49. ids ENSDARG00000071699 265 1.622 - - - 0.799 - - - 0.823 - iduronate 2-sulfatase [Source:ZFIN;Acc:ZDB-GENE-061215-37]
50. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1.621 - - - - - - - 0.895 0.726 retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
51. tnfaip3 ENSDARG00000027777 1066 1.617 - 0.837 - 0.780 - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
52. tmem79a ENSDARG00000071250 48 1.616 - 0.906 - - - - 0.710 - - transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
53. wipi2 ENSDARG00000037871 425 1.613 - - - - - - 0.757 0.856 - WD repeat domain, phosphoinositide interacting 2 [Source:ZFIN;Acc:ZDB-GENE-040718-488]
54. fam63a 381 1.605 - 0.881 - - - - 0.724 - - family with sequence similarity 63, member A, transcript variant X1
55. fut9d ENSDARG00000028098 427 1.604 - - - - - - - 0.855 0.749 fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
56. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1.604 - - - - - - - 0.854 0.750 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
57. PTP4A2 PTP4A2 185 1.602 - - - - 0.712 - - 0.890 -
58. slc6a2 ENSDARG00000016141 49 1.599 - - - - - - - 0.894 0.705 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
59. CABZ01048956.1 ENSDARG00000117474 253 1.598 - - - - - - 0.846 - 0.752 probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
60. gtpbp2 272 1.595 - 0.880 - - - - - 0.715 - GTP binding protein 2
61. nudcd1 ENSDARG00000036158 608 1.592 - - - - - - 0.734 0.858 - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
62. si:ch211-130m23.2 ENSDARG00000095136 121 1.589 - - - - - - - 0.874 0.715 si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
63. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1.587 - 0.734 0.853 - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
64. CU302376.1 CU302376.1 141 1.585 - 0.840 - - - 0.745 - - -
65. NGFR NGFR 186 1.585 - 0.739 - - - - 0.846 - -
66. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 1.582 - - - - - - 0.813 0.769 - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
67. zgc:162780 ENSDARG00000069548 340 1.571 - - - 0.801 - - 0.770 - - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
68. C9H2orf76 C9H2orf76 559 1.57 - - - 0.732 - - - 0.838 -
69. zgc:174696 ENSDARG00000110658 67 1.57 - 0.841 0.729 - - - - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
70. cap1 ENSDARG00000016350 891 1.562 - 0.828 - - 0.734 - - - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
71. gpr63 ENSDARG00000074540 242 1.56 - - - - - 0.734 - 0.826 - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]
72. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 1.557 - - - - - 0.736 0.821 - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
73. btr02 ENSDARG00000052215 401 1.555 - - - - - - 0.775 0.780 - bloodthirsty-related gene family, member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-228]
74. cers1 ENSDARG00000063412 590 1.553 - 0.849 - - 0.704 - - - - ceramide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-050208-406]
75. glra1 ENSDARG00000012019 315 1.546 - - 0.779 - 0.767 - - - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
76. apaf1 ENSDARG00000021239 1185 1.532 - - - - - - 0.805 - 0.727 apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
77. ercc6 ENSDARG00000075612 1175 1.53 - 0.780 - 0.750 - - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
78. ncaldb ENSDARG00000011334 123 1.519 - - - - - - - 0.817 0.702 neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
79. spryd7b ENSDARG00000069485, ENSDARG00000114214, ENSDARG00000115747 488 1.512 - - - 0.708 - - 0.804 - - SPRY domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-040426-1634]
80. ZNF408 ENSDARG00000036043 232 1.505 - - - - - 0.707 0.798 - - zinc finger protein 408 [Source:ZFIN;Acc:ZDB-GENE-130530-589]
81. exosc2 ENSDARG00000028688 726 1.496 - - - - - - - 0.761 0.735 exosome component 2 [Source:ZFIN;Acc:ZDB-GENE-050417-27]
82. zgc:163030 ENSDARG00000069192 2963 1.494 - - - - - - - 0.731 0.763 zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
83. si:ch1073-429i10.1 ENSDARG00000075664 471 1.48 - - - 0.760 - - 0.720 - - si:ch1073-429i10.1 [Source:ZFIN;Acc:ZDB-GENE-120215-259]
84. carf ENSDARG00000019950 303 1.477 - 0.706 - - - - 0.771 - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
85. cryzl1 ENSDARG00000026902 401 1.474 - 0.723 - - - - - 0.751 - crystallin, zeta (quinone reductase)-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-378]
86. gclm ENSDARG00000018953 1712 1.469 - 0.704 - - - - 0.765 - - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
87. kif16ba ENSDARG00000100225 114 1.467 0.727 - - - - 0.740 - - - kinesin family member 16Ba [Source:ZFIN;Acc:ZDB-GENE-090313-233]
88. mir203b 1077 1.46 - - - 0.743 - - 0.717 - - microRNA 203b
89. CU459152.1 CU459152.1 407 1.438 - - - - - 0.710 - - 0.728
90. txndc11 ENSDARG00000101291 589 1.43 - 0.715 - 0.715 - - - - - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
91. si:ch211-155o21.3 ENSDARG00000086518 301 1.414 - - - - 0.710 0.704 - - - si:ch211-155o21.3 [Source:ZFIN;Acc:ZDB-GENE-121214-24]
92. dmrta2 ENSDARG00000039412 328 0.975 - - - - - - 0.975 - - DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
93. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.974 - - - - - - 0.974 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
94. BX548021.2_1 BX548021.2_1 164 0.974 - - - - - - 0.974 - -
95. BX465186.1 ENSDARG00000093047 28 0.967 - - - - - - 0.967 - -
96. cdk10 ENSDARG00000034256 166 0.965 - - - - - - 0.965 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
97. gnptg ENSDARG00000038566 259 0.965 - - - - - - 0.965 - - N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
98. tbcela ENSDARG00000002682 1179 0.965 - - - - - - 0.965 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
99. zgc:77151 ENSDARG00000054307 120 0.964 - - - - - - 0.964 - - zgc:77151 [Source:ZFIN;Acc:ZDB-GENE-030131-9097]
100. BX324198.2 BX324198.2 84 0.961 - - - - - - 0.961 - -

There are 1595 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA