Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for alkbh3

Gene Name Gene ID Reads Annotation
alkbh3 ENSDARG00000045606, ENSDARG00000097208 169 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-040801-254]










Genes with expression patterns similar to alkbh3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. alkbh3 ENSDARG00000045606, ENSDARG00000097208 169 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase [Source:ZFIN;Acc:ZDB-GENE-040801-254]
2. larp6 1695 2.406 - 0.807 - 0.778 - - - 0.821 - La ribonucleoprotein domain family, member 6
3. CAPN2 CAPN2 1497 1.84 - 0.880 - - - - - 0.960 -
4. adamtsl7 ENSDARG00000055439 575 1.811 - 0.897 - - - - - 0.914 - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
5. brap ENSDARG00000008560 821 1.798 - 0.881 - - - - - 0.917 - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
6. ARSJ ENSDARG00000077590 684 1.76 - 0.891 - 0.869 - - - - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
7. RIBC2 ENSDARG00000075177 445 1.759 - 0.920 - - - - - 0.839 - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
8. SNAP23_1 SNAP23_1 613 1.744 - 0.840 - - - - - 0.904 -
9. zgc:77486 ENSDARG00000013711, ENSDARG00000093978, ENSDARG00000111468, ENSDARG00000116962 139 1.743 0.806 0.937 - - - - - - - zgc:77486 [Source:ZFIN;Acc:ZDB-GENE-040426-2056]
10. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.737 0.904 - - - - - 0.833 - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
11. SLC2A13 SLC2A13 74 1.727 0.839 0.888 - - - - - - -
12. fam178a fam178a 29 1.719 0.839 0.880 - - - - - - -
13. BX908759.1 BX908759.1 52 1.709 - - - - - - 0.723 0.986 -
14. sh3yl1 ENSDARG00000074393 815 1.704 - 0.817 - - - - - 0.887 - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
15. efr3ba ENSDARG00000033516 19 1.695 0.839 0.856 - - - - - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
16. si:ch211-106h11.3 ENSDARG00000027360 154 1.695 - 0.862 - 0.833 - - - - - si:ch211-106h11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-296]
17. ints7 ENSDARG00000019300 273 1.693 - 0.874 - - - - - 0.819 - integrator complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-021220-6]
18. ENKD1 ENSDARG00000043550 44 1.692 - 0.880 - 0.812 - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
19. CAPN1 ENSDARG00000055338 683 1.679 - 0.884 - - - 0.795 - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
20. slc27a4 ENSDARG00000017047, ENSDARG00000113602 811 1.678 - - - - - - 0.744 0.934 - solute carrier family 27 (fatty acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-248]
21. cyb5r4 ENSDARG00000020898 119 1.672 - 0.871 - - - - 0.801 - - cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
22. ctnnd2a ENSDARG00000062415, ENSDARG00000111725 262 1.667 0.857 - - 0.810 - - - - - catenin (cadherin-associated protein), delta 2a [Source:ZFIN;Acc:ZDB-GENE-030616-60]
23. syt1a ENSDARG00000030614 542 1.663 0.808 0.855 - - - - - - - synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
24. vox ENSDARG00000099761 801 1.659 - 0.727 - - - - - 0.932 - ventral homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-1]
25. ythdf3 ENSDARG00000057939 475 1.653 - 0.719 - - - - - 0.934 - YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
26. nr1d4b ENSDARG00000059370 243 1.652 0.819 - - 0.833 - - - - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
27. cnpy2 ENSDARG00000007207 241 1.652 - - - - - - 0.709 0.943 - canopy FGF signaling regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060315-4]
28. usp37 ENSDARG00000040990 637 1.65 - 0.939 - - - - 0.711 - - ubiquitin specific peptidase 37 [Source:ZFIN;Acc:ZDB-GENE-061013-802]
29. aspg ENSDARG00000052942 1406 1.614 - - - 0.711 - - - 0.903 - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
30. C16H8orf76 C16H8orf76 329 1.613 - 0.787 - 0.826 - - - - -
31. got1l1 ENSDARG00000053644 49 1.608 - 0.781 - 0.827 - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
32. sepn1 801 1.606 - - - - - 0.710 - 0.896 - selenoprotein N, 1
33. si:ch211-223a21.3 ENSDARG00000104737 28 1.599 - 0.897 - - 0.702 - - - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
34. lamb2l ENSDARG00000033950 952 1.589 - 0.777 - - - - - 0.812 - laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
35. znf516 ENSDARG00000070809 65 1.577 0.869 - - - - 0.708 - - - zinc finger protein 516 [Source:ZFIN;Acc:ZDB-GENE-060503-194]
36. CU462878.1 ENSDARG00000090072 352 1.555 - 0.702 - 0.853 - - - - - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
37. si:dkey-17m8.2 ENSDARG00000035797 40 1.553 0.776 - - - - - 0.777 - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
38. aak1 aak1 81 1.55 - 0.793 - - - 0.757 - - -
39. twist3 ENSDARG00000019646 1221 1.544 0.728 - - - - - - 0.816 - twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
40. BX510922.1 ENSDARG00000101184 147 1.535 0.817 - - - - 0.718 - - -
41. CU694372.1 ENSDARG00000097988 105 1.535 0.703 - - 0.832 - - - - -
42. rdh12l ENSDARG00000045277 139 1.534 - 0.803 - - - 0.731 - - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
43. batf3 ENSDARG00000042577 34 1.529 - - - 0.811 - 0.718 - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
44. sacs ENSDARG00000091042 314 1.521 - 0.706 - - - - 0.815 - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
45. si:ch211-23l10.3 ENSDARG00000073998 113 1.511 - 0.760 - - - - 0.751 - - si:ch211-23l10.3 [Source:ZFIN;Acc:ZDB-GENE-091204-25]
46. fgf24 ENSDARG00000037677 242 1.493 - 0.708 - 0.785 - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
47. il2rga ENSDARG00000068858, ENSDARG00000110645 32 1.493 0.764 - - - - - 0.729 - - interleukin 2 receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-080402-1]
48. epb41a ENSDARG00000099283 860 1.461 0.703 0.758 - - - - - - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
49. gnaq ENSDARG00000011487 123 1.461 0.703 0.758 - - - - - - - guanine nucleotide binding protein (G protein), q polypeptide [Source:ZFIN;Acc:ZDB-GENE-081104-25]
50. tcea2 ENSDARG00000012927 440 1.457 0.748 - - - - 0.709 - - - transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985]
51. C1H20orf27 C1H20orf27 69 1.448 0.737 - - - - - 0.711 - -
52. zbtb3 ENSDARG00000036235 155 1.426 - 0.714 - - - - 0.712 - - zinc finger and BTB domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050506-105]
53. her4.1 ENSDARG00000056732 1264 1.415 0.710 0.705 - - - - - - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
54. si:ch211-57m13.9 ENSDARG00000095884 10 1 1.000 - - - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
55. fbxo41 ENSDARG00000078908 95 1 1.000 - - - - - - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
56. si:ch211-274p24.5 si:ch211-274p24.5 122 1 1.000 - - - - - - - -
57. STEAP2 ENSDARG00000062887 59 1 1.000 - - - - - - - - STEAP family member 2, metalloreductase [Source:ZFIN;Acc:ZDB-GENE-131121-79]
58. si:dkey-100n23.5 ENSDARG00000086911 427 0.989 - - - - - - - 0.989 - si:dkey-100n23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-347]
59. tlr18 ENSDARG00000040249 45 0.987 - - - - - - - 0.987 - toll-like receptor 18 [Source:ZFIN;Acc:ZDB-GENE-040220-2]
60. CU367845.1_1 CU367845.1_1 43 0.987 - - - - - - - 0.987 -
61. zgc:158417 ENSDARG00000101671 46 0.987 - - - - - - - 0.987 - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
62. npffr2.1 npffr2.1 60 0.987 - - - - - - - 0.987 -
63. si:dkey-31e10.6 si:dkey-31e10.6 113 0.986 - - - - - - - 0.986 -
64. SCYL1 ENSDARG00000079854 78 0.986 - - - - - - - 0.986 - SCY1-like, kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8915]
65. si:ch211-232m8.3 ENSDARG00000095092 161 0.985 - - - - - - - 0.985 - si:ch211-232m8.3 [Source:ZFIN;Acc:ZDB-GENE-081107-22]
66. RNF14 ENSDARG00000043905 41 0.985 - - - - - - - 0.985 - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
67. zgc:92594 ENSDARG00000089517 83 0.983 - - - - - - - 0.983 - zgc:92594 [Source:ZFIN;Acc:ZDB-GENE-040718-482]
68. si:ch211-207d6.2 ENSDARG00000031658 93 0.981 - - - - - - - 0.981 - si:ch211-207d6.2 [Source:ZFIN;Acc:ZDB-GENE-070912-185]
69. si:dkeyp-104f11.9 ENSDARG00000096715 81 0.981 - - - - - - - 0.981 - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
70. BX927351.1 ENSDARG00000096844 125 0.981 - - - - - - - 0.981 -
71. uaca uaca 140 0.98 - - - - - - - 0.980 -
72. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.98 - - - - - - - 0.980 - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
73. fanci ENSDARG00000026224 415 0.98 - - - - - - - 0.980 - FA complementation group I [Source:ZFIN;Acc:ZDB-GENE-030131-2905]
74. prkceb ENSDARG00000069928, ENSDARG00000114025 330 0.979 - - - - - - - 0.979 - protein kinase C, epsilon b [Source:ZFIN;Acc:ZDB-GENE-081028-47]
75. fbxw4 ENSDARG00000033551 645 0.979 - - - - - - - 0.979 - F-box and WD repeat domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-000516-1]
76. stap2b ENSDARG00000043281 174 0.978 - - - - - - - 0.978 - signal transducing adaptor family member 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2540]
77. g6pc3 ENSDARG00000020371 152 0.978 - - - - - - - 0.978 - glucose 6 phosphatase, catalytic, 3 [Source:ZFIN;Acc:ZDB-GENE-061215-19]
78. pde4cb ENSDARG00000002411 63 0.977 - - - - - - - 0.977 - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
79. STARD10 ENSDARG00000097718 181 0.976 - - - - - - - 0.976 - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
80. si:dkey-77f17.1 si:dkey-77f17.1 83 0.976 - - - - - - - 0.976 -
81. sp7 ENSDARG00000019516 266 0.975 - - - - - - - 0.975 - Sp7 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040629-2]
82. TEP1 ENSDARG00000038713 289 0.974 - - - - - - - 0.974 - telomerase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6153]
83. skap2 ENSDARG00000000906 146 0.974 - - - - - - - 0.974 - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
84. CABZ01049802.1 CABZ01049802.1 195 0.973 - - - - - - - 0.973 -
85. zgc:174697 zgc:174697 128 0.972 - - - - - - - 0.972 -
86. pld1b ENSDARG00000057125 325 0.972 - - - - - - - 0.972 - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
87. yjefn3 ENSDARG00000061692 211 0.97 0.970 - - - - - - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
88. mical1 ENSDARG00000011809 586 0.969 - - - - - - - 0.969 - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081022-3]
89. galnt6 ENSDARG00000014386 1126 0.968 - - - - - - - 0.968 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
90. FAM83G ENSDARG00000062929 1142 0.967 - - - - - - - 0.967 - family with sequence similarity 83 member G [Source:HGNC Symbol;Acc:HGNC:32554]
91. slc44a1b ENSDARG00000090982 240 0.966 - - - - - - - 0.966 - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
92. cldnf ENSDARG00000043133 1006 0.966 - - - - - - - 0.966 - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
93. RBMS1 RBMS1 258 0.966 - - - - - - - 0.966 -
94. ptx3a ENSDARG00000068275 589 0.964 - - - - - - - 0.964 - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
95. ing5a ENSDARG00000022413 268 0.964 - - - - - - - 0.964 - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
96. epb41l3b ENSDARG00000019917 9 0.963 - 0.963 - - - - - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
97. cplx3b ENSDARG00000089486 315 0.963 - - - - - - - 0.963 - complexin 3b [Source:ZFIN;Acc:ZDB-GENE-091204-403]
98. TRPM4 TRPM4 60 0.962 - 0.962 - - - - - - -
99. rpe65c ENSDARG00000054420, ENSDARG00000113640 28 0.962 - 0.962 - - - - - - - retinal pigment epithelium-specific protein 65c [Source:ZFIN;Acc:ZDB-GENE-081104-505]
100. smg8 ENSDARG00000061378 1164 0.962 - - - - - - - 0.962 - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]

There are 1220 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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