Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for adat3

Gene Name Gene ID Reads Annotation
adat3 ENSDARG00000005640 96 adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]










Genes with expression patterns similar to adat3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. adat3 ENSDARG00000005640 96 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
2. esm1 ENSDARG00000104370 186 2.385 - - 0.757 - - - 0.884 - 0.744 endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
3. CR848784.2 ENSDARG00000111157 16 1.947 - - - - - 0.947 1.000 - -
4. si:dkey-152b24.7 ENSDARG00000099715 26 1.881 - - - - - 0.906 0.975 - - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
5. cyth4b ENSDARG00000103984 27 1.828 - - - - - 0.906 0.922 - - cytohesin 4b [Source:ZFIN;Acc:ZDB-GENE-080219-45]
6. haao ENSDARG00000076487 143 1.796 - - - 0.955 - 0.841 - - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
7. plch2a ENSDARG00000059960 222 1.775 - - - 0.928 - 0.847 - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
8. TRIM35_8 TRIM35_8 43 1.766 - - - - - - 1.000 - 0.766
9. zgc:162232 zgc:162232 251 1.724 - - - 0.893 - 0.831 - - -
10. mlh3 ENSDARG00000056334 142 1.717 - 0.872 - 0.845 - - - - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
11. si:ch1073-263o8.2 ENSDARG00000090870 66 1.689 - 0.742 - - - 0.947 - - - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
12. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 1.684 - - - 0.848 - 0.836 - - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
13. CABZ01063556.1 ENSDARG00000116344 319 1.684 - 0.839 - - - 0.845 - - - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
14. SLC7A1 ENSDARG00000016439, ENSDARG00000115084 54 1.683 - 0.935 - - - - - - 0.748 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
15. tmprss13b ENSDARG00000077573 47 1.681 - - - - - 0.889 - - 0.792 transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
16. zdhhc16b ENSDARG00000015989 193 1.664 - - - 0.908 - 0.756 - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
17. si:dkey-72l17.6 ENSDARG00000102008 42 1.659 - - - - 0.741 0.918 - - - si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
18. BX537137.1 ENSDARG00000092436 77 1.646 - - - - - 0.946 0.700 - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
19. mgrn1a_1 ENSDARG00000100072 223 1.604 0.766 - - - - 0.838 - - - mahogunin, ring finger 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6192]
20. BX119963.1 ENSDARG00000096135 28 1.595 - 0.703 - - - - 0.892 - -
21. si:ch211-225b11.1 ENSDARG00000002405 172 1.58 - - - - - 0.862 0.718 - - si:ch211-225b11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-39]
22. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1.579 - - - - - - 0.765 - 0.814 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
23. mtfr2 ENSDARG00000060394 482 1.577 - - - 0.791 - 0.786 - - - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
24. kbtbd7 ENSDARG00000078001 367 1.57 0.768 - - - - 0.802 - - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
25. chp2 ENSDARG00000025788, ENSDARG00000113942 460 1.552 0.751 - - 0.801 - - - - - calcineurin-like EF-hand protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5810]
26. scarb1 ENSDARG00000101557 503 1.55 - - - 0.795 - - - - 0.755 scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
27. dak dak 139 1.549 - 0.725 - - - 0.824 - - -
28. PSD PSD 367 1.545 - 0.736 - 0.809 - - - - -
29. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 1.542 0.780 - - - - 0.762 - - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
30. si:dkey-68l7.1 si:dkey-68l7.1 159 1.533 - 0.730 - 0.803 - - - - -
31. ZFAT ENSDARG00000077987 205 1.515 0.736 - - - - 0.779 - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
32. si:dkeyp-110e4.11 ENSDARG00000071585 148 1.498 - - - - - 0.774 0.724 - - si:dkeyp-110e4.11 [Source:ZFIN;Acc:ZDB-GENE-070424-267]
33. si:dkey-15h8.12 si:dkey-15h8.12 206 1.489 0.775 - - - - 0.714 - - -
34. STX3 ENSDARG00000051981 23 1.486 - - - - - - 0.750 - 0.736 syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438]
35. CABZ01054396.1 CABZ01054396.1 139 1.476 - 0.712 - - - - 0.764 - -
36. satb1a ENSDARG00000057649 250 1 - 1.000 - - - - - - - SATB homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-031010-36]
37. si:ch73-341p18.6 si:ch73-341p18.6 1 1 - - - - - - 1.000 - -
38. BX005421.4 BX005421.4 11 1 - - - - - - 1.000 - -
39. sec22bb ENSDARG00000100435 33 1 - 1.000 - - - - - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
40. trim35-3_1 ENSDARG00000052255 6 1 - - - - - - 1.000 - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
41. si:ch73-7i4.1 ENSDARG00000094554 771 1 - - - - - - 1.000 - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
42. AL928852.1 AL928852.1 23 1 - - - - - - 1.000 - -
43. BX465203.2 BX465203.2 23 1 - - - - - - 1.000 - -
44. mylk3 ENSDARG00000076348 19 1 - - - - - - 1.000 - - myosin light chain kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3497]
45. FP325123.1 ENSDARG00000105359 246 1 - - - - - - 1.000 - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
46. pxmp2 ENSDARG00000003144 50 1 - - - - - - 1.000 - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
47. zgc:172139 ENSDARG00000068830 10 1 - - - - - - 1.000 - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
48. map7d1a ENSDARG00000098802 118 1 - - - - - - 1.000 - - MAP7 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-060503-22]
49. si:dkey-204a24.11 ENSDARG00000058685 3 1 - - - - - - 1.000 - - si:dkey-204a24.11 [Source:ZFIN;Acc:ZDB-GENE-120215-129]
50. si:ch211-71k24.5 si:ch211-71k24.5 9 1 - - - - - - 1.000 - -
51. si:dkeyp-46h3.2 ENSDARG00000092498 23 1 - - - - - - 1.000 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
52. runx2b ENSDARG00000059233 106 1 - - - - - - 1.000 - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
53. htr6 ENSDARG00000016095 9 1 - - - - - - 1.000 - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
54. stoml3a ENSDARG00000079914 4 1 - - - - - - 1.000 - - stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
55. C4H12orf55 C4H12orf55 14 1 - - - - - - 1.000 - -
56. mlphb ENSDARG00000062481 14 1 - - - - - - 1.000 - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
57. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - - - - - 1.000 - -
58. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 - - - - - - 1.000 - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
59. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1 - - - - - - 1.000 - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
60. DEPDC7 19 1 - - - - - - 1.000 - - DEP domain containing 7, transcript variant X1
61. ZNF337_16 ZNF337_16 22 1 - - - - - - 1.000 - -
62. FMN1 ENSDARG00000011975 2 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
63. ppp6r2a ENSDARG00000045540 60 1 - - - - - - 1.000 - - protein phosphatase 6, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5428]
64. abcc9 ENSDARG00000015985 20 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
65. FGFBP2 FGFBP2 16 1 - - - - - - 1.000 - -
66. si:dkey-31m5.3 ENSDARG00000110121 1 1 - - - - - - 1.000 - - si:dkey-31m5.3 [Source:ZFIN;Acc:ZDB-GENE-070912-515]
67. epsti1 ENSDARG00000094578 33 1 - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
68. map3k12 ENSDARG00000103651 3 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 12 [Source:ZFIN;Acc:ZDB-GENE-040426-2436]
69. tacr1b ENSDARG00000102900 1 1 - - - - - - 1.000 - - tachykinin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-091117-17]
70. FP103005.1 ENSDARG00000099852 4 1 - - - - - - 1.000 - -
71. GSTK1_2 GSTK1_2 8 1 - - - - - - 1.000 - -
72. vmhcl 119 1 - - - - - - 1.000 - - ventricular myosin heavy chain-like
73. C20H1orf95 C20H1orf95 12 1 - - - - - - 1.000 - -
74. CT573389.1 CT573389.1 26 1 - - - - - - 1.000 - -
75. si:ch73-30l9.1 ENSDARG00000095891 42 1 - - - - - - 1.000 - - si:ch73-30l9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-132]
76. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - - - - - 1.000 - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
77. BX322608.1 ENSDARG00000111690 326 1 - - - - - - 1.000 - -
78. U1_33 U1_33 76 1 - 1.000 - - - - - - -
79. irx4b ENSDARG00000036051 54 1 - - - - - - 1.000 - - iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]
80. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 - - - - - - 1.000 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
81. SNORA31 SNORA31 23 1 - - - - - - 1.000 - -
82. taar19o ENSDARG00000093266, ENSDARG00000116999 1 1 - - - - - - 1.000 - - trace amine associated receptor 19o [Source:ZFIN;Acc:ZDB-GENE-060414-13]
83. camk1db ENSDARG00000017446 47 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
84. BX469910.2 ENSDARG00000096127 6 1 - - - - - - 1.000 - -
85. rpz ENSDARG00000091161 4 1 - 1.000 - - - - - - - rapunzel [Source:ZFIN;Acc:ZDB-GENE-070117-651]
86. cs_1 ENSDARG00000103364 2 1 - - - - - - 1.000 - - citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]
87. diaph2 ENSDARG00000076060 26 1 - - - - - - 1.000 - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
88. zgc:113098 zgc:113098 22 1 - - - - - - 1.000 - -
89. pacrg ENSDARG00000087556 25 1 - - - - - - 1.000 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
90. col28a1 col28a1 5 1 - - - - - - 1.000 - -
91. si:dkey-246j7.1 ENSDARG00000095559 4 1 - - - - - - 1.000 - - si:dkey-246j7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-230]
92. CU183952.2 CU183952.2 6 1 - - - - - - 1.000 - -
93. SPP2 ENSDARG00000095590 5 1 - - - - - - 1.000 - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
94. galca ENSDARG00000037064 12 1 - - - - - - 1.000 - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
95. zfpm2a ENSDARG00000040123 46 1 - - - - - - 1.000 - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
96. v2ra1 ENSDARG00000104881 1 1 - - - - - - 1.000 - - vomeronasal 2 receptor, a1 [Source:ZFIN;Acc:ZDB-GENE-050419-156]
97. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 - - - - - - 1.000 - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
98. tmc6a ENSDARG00000069787 3 1 - - - - - - 1.000 - - transmembrane channel-like 6a [Source:ZFIN;Acc:ZDB-GENE-081114-3]
99. CEACAM7 CEACAM7 46 1 - - - - - - 1.000 - -
100. FAM132B FAM132B 39 0.982 - - - - - 0.982 - - -

There are 973 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA