Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TRAFD1

Gene Name Gene ID Reads Annotation
TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]










Genes with expression patterns similar to TRAFD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]
2. fbxw2 ENSDARG00000009745 618 2.716 - - - - - 0.829 0.968 0.919 - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
3. NGFR NGFR 186 1.799 - - - - - - 0.856 0.943 -
4. lztr1 ENSDARG00000015905, ENSDARG00000114621 632 1.766 - - - - - 0.847 0.919 - - leucine-zipper-like transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9564]
5. rufy2 ENSDARG00000062019, ENSDARG00000116213, ENSDARG00000116286 409 1.725 - 0.821 - - - - - 0.904 - RUN and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070424-66]
6. gnptg ENSDARG00000038566 259 1.706 - - - - - - 0.898 0.808 - N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
7. znf438 ENSDARG00000061311 524 1.686 - 0.829 - - - - - 0.857 - zinc finger protein 438 [Source:ZFIN;Acc:ZDB-GENE-060929-868]
8. C13H10orf11 1209 1.669 - 0.752 - - - - - 0.917 - c13h10orf11 homolog (H. sapiens), transcript variant X2
9. CLMN ENSDARG00000096867 73 1.657 - - - - - 0.755 - 0.902 - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
10. gtdc1 ENSDARG00000020642 299 1.648 - - - - - 0.770 - 0.878 - glycosyltransferase-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-8]
11. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 1.644 - - - - - 0.791 0.853 - - coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
12. PKN2 ENSDARG00000101293 358 1.634 - - - - - - 0.732 0.902 - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
13. crtac1a ENSDARG00000059826 22 1.634 - - - - - 0.752 0.882 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
14. N4BP2L1 N4BP2L1 573 1.623 - - - - - - 0.742 0.881 -
15. pnpo ENSDARG00000017612, ENSDARG00000109509 570 1.62 - - - - - - 0.795 0.825 - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
16. hpx ENSDARG00000012609 93 1.618 - - - - - 0.738 0.880 - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
17. cherp ENSDARG00000021812 286 1.616 - - - - - 0.749 0.867 - - calcium homeostasis endoplasmic reticulum protein [Source:ZFIN;Acc:ZDB-GENE-040407-1]
18. si:ch211-162i8.5 ENSDARG00000111716 76 1.612 - 0.729 - - - - 0.883 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
19. ttc4 ENSDARG00000044405, ENSDARG00000117012 453 1.606 - - - - - - 0.734 0.872 - tetratricopeptide repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1021]
20. mtx3 ENSDARG00000090195 42 1.592 0.740 - - - - - 0.852 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
21. mtx1b ENSDARG00000036109 445 1.587 - - - - - - 0.765 0.822 - metaxin 1b [Source:ZFIN;Acc:ZDB-GENE-021210-1]
22. thtpa ENSDARG00000063049 286 1.573 0.738 - - - - - 0.835 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
23. clptm1l ENSDARG00000021048 1234 1.568 - - - - - 0.808 - 0.760 - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
24. pkig ENSDARG00000086471 665 1.564 - - - - - 0.778 0.786 - - protein kinase (cAMP-dependent, catalytic) inhibitor gamma [Source:ZFIN;Acc:ZDB-GENE-050302-97]
25. ric8b ENSDARG00000005972, ENSDARG00000116212 1119 1.554 0.837 - - - - 0.717 - - - RIC8 guanine nucleotide exchange factor B [Source:ZFIN;Acc:ZDB-GENE-030131-6435]
26. myo9al1 myo9al1 1194 1.551 - - - - - 0.712 0.839 - -
27. slc17a5 ENSDARG00000055190 857 1.541 - - - - - 0.718 0.823 - - solute carrier family 17 (acidic sugar transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060929-1158]
28. fam46a fam46a 92 1.536 - - - - - 0.709 0.827 - -
29. ASPH ENSDARG00000055945 214 1.532 0.739 - - - - - 0.793 - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
30. atg16l1 ENSDARG00000099430 924 1.531 - - - - - - 0.738 0.793 - ATG16 autophagy related 16-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-401]
31. herc2 ENSDARG00000073841 486 1.526 - - - - - 0.743 - 0.783 - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070718-6]
32. fam20c fam20c 603 1.525 - - - - - 0.758 0.767 - -
33. STYK1 108 1.525 - - - - - 0.804 0.721 - - serine/threonine/tyrosine kinase 1
34. ncoa6 ENSDARG00000071272 759 1.521 0.710 0.811 - - - - - - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
35. las1l ENSDARG00000062457, ENSDARG00000114475 3987 1.519 - 0.764 - - - - 0.755 - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
36. ENSDARG00000089986 ENSDARG00000089986 308 1.512 0.750 - - - - 0.762 - - -
37. rint1 ENSDARG00000005547 898 1.505 - 0.772 - - - - 0.733 - - RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
38. CU929175.1 CU929175.1 200 1.5 - 0.780 - - - - 0.720 - -
39. spryd7b ENSDARG00000069485, ENSDARG00000114214, ENSDARG00000115747 488 1.493 - 0.733 - - - - 0.760 - - SPRY domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-040426-1634]
40. si:dkey-23c22.1 si:dkey-23c22.1 133 1.491 - - - - - 0.775 0.716 - -
41. nudt5 ENSDARG00000078073 779 1.487 - - - - - 0.732 - 0.755 - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
42. hcn4l ENSDARG00000074419 46 1.485 0.704 - - - - 0.781 - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
43. CENPF ENSDARG00000055133 436 1.485 - 0.745 - - - - - 0.740 - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
44. dlx2a ENSDARG00000079964 1253 1.482 - - - - - 0.701 0.781 - - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
45. mycbp ENSDARG00000091001 1511 1.468 - 0.761 - - - - - 0.707 - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
46. eny2 ENSDARG00000070046 3741 1.457 - - - - - 0.724 - 0.733 - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
47. si:dkey-10o6.2 ENSDARG00000074628 22 1.44 - - - - - 0.738 0.702 - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
48. acvrl1 ENSDARG00000018179 308 1.436 - 0.732 - - - - 0.704 - - activin A receptor like type 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
49. zgc:85932 ENSDARG00000098239 373 1.43 - 0.721 - - - 0.709 - - - zgc:85932 [Source:ZFIN;Acc:ZDB-GENE-040426-2460]
50. si:ch211-39k3.2 ENSDARG00000075881 531 0.956 - - - - - - - 0.956 - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
51. znf511 ENSDARG00000000760 446 0.955 - - - - - - - 0.955 - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
52. BX511263.1 BX511263.1 64 0.954 - - - - - - - 0.954 -
53. dph5 ENSDARG00000100242, ENSDARG00000115537 537 0.951 - - - - - - 0.951 - - diphthamide biosynthesis 5 [Source:ZFIN;Acc:ZDB-GENE-041114-85]
54. frmd4bb ENSDARG00000076496 18 0.951 - - - - - - - 0.951 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
55. d2hgdh ENSDARG00000060210 362 0.949 - - - - - - - 0.949 - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
56. rrp15 ENSDARG00000013478 1126 0.948 - - - - - - - 0.948 - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]
57. cyp2k8 ENSDARG00000101190 69 0.948 - - - - - - - 0.948 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
58. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.947 - - - - - - - 0.947 - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
59. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.946 - - - - - - - 0.946 - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
60. ASTL ASTL 24 0.945 - - - - - - - 0.945 -
61. MAP6 MAP6 643 0.944 - - - - - - - 0.944 -
62. si:ch211-237l4.6 ENSDARG00000056915 49 0.944 - - - - - - - 0.944 - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
63. traf1 ENSDARG00000069482 50 0.943 - - - - - - - 0.943 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
64. zgc:174268 ENSDARG00000076807 250 0.942 - - - - - - - 0.942 - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
65. POLRMT ENSDARG00000101220 215 0.942 - - - - - - - 0.942 - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
66. RNF115 ENSDARG00000062450 83 0.941 - - - - - - - 0.941 - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
67. smyd3 ENSDARG00000058050 69 0.941 - - - - - - - 0.941 - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
68. nkx2.9 ENSDARG00000020332 357 0.939 - - - - - - - 0.939 - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
69. CABZ01086801.1 CABZ01086801.1 41 0.939 - - - - - - - 0.939 -
70. zgc:113294 ENSDARG00000032285 132 0.939 - - - - - - - 0.939 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
71. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 0.938 - - - - - - - 0.938 - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
72. crfb17 511 0.937 - - - - - - - 0.937 - cytokine receptor family member B17
73. zgc:92907 ENSDARG00000011026 986 0.936 - - - - - - - 0.936 - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
74. plk2a ENSDARG00000090752 392 0.935 - - - - - - - 0.935 - polo-like kinase 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060810-71]
75. cd40 ENSDARG00000054968 90 0.932 - - - - - - - 0.932 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
76. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 0.931 - - - - - - - 0.931 - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
77. GPRIN3 GPRIN3 169 0.931 - - - - - - - 0.931 -
78. rsrc1 ENSDARG00000033987 552 0.931 - - - - - - - 0.931 - arginine/serine-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2374]
79. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 0.929 - - - - - - - 0.929 - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
80. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 0.928 - - - - - - 0.928 - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
81. hsd3b1 ENSDARG00000069926 35 0.927 - - - - - - 0.927 - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
82. si:dkey-14d8.2 38 0.927 - - - - - - - 0.927 - si:dkey-14d8.2
83. msxa msxa 263 0.927 - - - - - - 0.927 - -
84. si:dkey-93n13.2 ENSDARG00000092816 119 0.926 - - - - - - - 0.926 - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
85. zgc:173726 ENSDARG00000077078 250 0.924 - - - - - - - 0.924 - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
86. TTC37 ENSDARG00000074314 356 0.923 - - - - - - - 0.923 - tetratricopeptide repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-110125-2]
87. tmtc2 tmtc2 798 0.922 - - - - - - - 0.922 -
88. scarb1 ENSDARG00000101557 503 0.921 - - - - - - - 0.921 - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
89. nlgn3b ENSDARG00000062376 171 0.918 - - - - - - - 0.918 - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
90. elp4 ENSDARG00000008852 253 0.917 - - - - - - - 0.917 - elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
91. si:ch211-59h6.1 ENSDARG00000013022 193 0.917 - - - - - - - 0.917 - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
92. dok1b ENSDARG00000099177 163 0.917 - - - - - - - 0.917 - docking protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2063]
93. CU855815.2 CU855815.2 80 0.916 - - - - - - - 0.916 -
94. ints9 ENSDARG00000067913 600 0.915 - - - - - - - 0.915 - integrator complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-061013-129]
95. znrf3 ENSDARG00000062573 205 0.915 - - - - - - - 0.915 - zinc and ring finger 3 [Source:ZFIN;Acc:ZDB-GENE-070705-263]
96. si:ch73-196k8.2 si:ch73-196k8.2 427 0.914 - - - - - - - 0.914 -
97. zgc:153896 ENSDARG00000003977 142 0.914 - - - - - - 0.914 - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
98. cyp1d1 ENSDARG00000035569 628 0.914 - - - - - - - 0.914 - cytochrome P450, family 1, subfamily D, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041114-179]
99. pfkfb2a ENSDARG00000023840 184 0.914 - - - - - - - 0.914 - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
100. mitd1 ENSDARG00000044766 182 0.913 - - - - - - 0.913 - - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]

There are 996 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA