Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cd40

Gene Name Gene ID Reads Annotation
cd40 ENSDARG00000054968 90 CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]










Genes with expression patterns similar to cd40

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cd40 ENSDARG00000054968 90 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
2. si:dkeyp-117h8.2 ENSDARG00000011602 260 2.371 - - 0.846 - 0.707 0.818 - - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
3. GPRIN3 GPRIN3 169 1.861 - - - - 0.927 - - 0.934 -
4. BX511263.1 BX511263.1 64 1.859 - 0.913 - - - - - 0.946 -
5. CABZ01059415.2 CABZ01059415.2 195 1.849 - 0.910 0.939 - - - - - -
6. RNF115 ENSDARG00000062450 83 1.825 - - - - 0.863 - - 0.962 - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
7. gcnt3 ENSDARG00000060471 37 1.823 - - 0.967 - - - 0.856 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
8. traf1 ENSDARG00000069482 50 1.815 - - - - - - 0.856 0.959 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
9. ASTL ASTL 24 1.805 - - - - - - - 0.968 0.837
10. slc9a8 ENSDARG00000020699 206 1.796 - - - - 0.877 - - 0.919 - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
11. avpr2aa ENSDARG00000007436 43 1.765 - - - - - 0.909 0.856 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
12. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 1.749 - 0.875 - - - 0.874 - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
13. DPEP3 DPEP3 53 1.745 - 0.949 - - - - 0.796 - -
14. SOX8 SOX8 22 1.744 - 0.913 - - - - - - 0.831
15. cyp2n13 ENSDARG00000042953 10 1.73 - - - - - 0.874 0.856 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
16. HIST1H4J HIST1H4J 31 1.73 - 0.856 - - - 0.874 - - -
17. rpz4 ENSDARG00000039871 29 1.72 - 0.843 - - 0.877 - - - - rapunzel 4 [Source:ZFIN;Acc:ZDB-GENE-050417-472]
18. atp8b1 ENSDARG00000060980 181 1.719 - 0.900 - - - - - 0.819 - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
19. si:ch211-237l4.6 ENSDARG00000056915 49 1.716 - - - - - - 0.773 0.943 - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
20. osbpl11 ENSDARG00000076328 195 1.707 - 0.875 - - - - - 0.832 - oxysterol binding protein-like 11 [Source:ZFIN;Acc:ZDB-GENE-081105-135]
21. gcgrb ENSDARG00000036272 54 1.701 - 0.883 - - - - 0.818 - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
22. si:dkey-175m17.7 ENSDARG00000078317 115 1.7 - 0.813 - - - 0.887 - - - si:dkey-175m17.7 [Source:ZFIN;Acc:ZDB-GENE-091204-18]
23. DSP DSP 199 1.699 - - 0.815 - - - - 0.884 -
24. lrp1bb ENSDARG00000061517 172 1.698 - - 0.965 - 0.733 - - - - low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
25. scarb1 ENSDARG00000101557 503 1.688 - 0.740 - - - - - 0.948 - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
26. ZNF518B 475 1.686 - 0.775 0.911 - - - - - - zinc finger protein 518B
27. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 1.683 - 0.872 - - - - - 0.811 - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
28. nceh1a ENSDARG00000020427 35 1.678 - 0.882 - - 0.796 - - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
29. CU469544.1 CU469544.1 219 1.672 - - 0.811 - - 0.861 - - -
30. chico ENSDARG00000019588 77 1.669 - - 0.956 - - - 0.713 - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
31. si:ch211-59h6.1 ENSDARG00000013022 193 1.655 - - - - - - 0.744 0.911 - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
32. kdm2ba ENSDARG00000036593 96 1.654 - 0.780 - - - 0.874 - - - lysine (K)-specific demethylase 2Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2195]
33. ercc3 ENSDARG00000002402 340 1.654 - 0.908 - - - - 0.746 - - excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
34. CABZ01073654.1 CABZ01073654.1 16 1.651 - - - - - 0.874 0.777 - -
35. mtx1b ENSDARG00000036109 445 1.645 - - - - 0.819 - - 0.826 - metaxin 1b [Source:ZFIN;Acc:ZDB-GENE-021210-1]
36. elp4 ENSDARG00000008852 253 1.635 - - - - - - - 0.920 0.715 elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
37. ARSJ ENSDARG00000077590 684 1.631 - - 0.865 - - - 0.766 - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
38. ankk1 ENSDARG00000056921 119 1.63 - - - - - 0.838 - - 0.792 ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
39. sergef ENSDARG00000070986, ENSDARG00000111782 48 1.622 - - 0.837 - - - 0.785 - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
40. CCNJ ENSDARG00000059917 115 1.62 - 0.913 - - - - - - 0.707 cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
41. SFT2D2_1 SFT2D2_1 219 1.611 - - - - - - 0.777 - 0.834
42. si:ch211-214c7.4 ENSDARG00000069595 56 1.605 - - - - - 0.874 - - 0.731 si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
43. xdh ENSDARG00000055240 250 1.6 - 0.897 - - 0.703 - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
44. mysm1 ENSDARG00000034693 291 1.598 - - 0.768 - - - - 0.830 - Myb-like, SWIRM and MPN domains 1 [Source:ZFIN;Acc:ZDB-GENE-041014-28]
45. kcnip3a ENSDARG00000034229 63 1.593 - - 0.800 - - - 0.793 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
46. MPPED1 ENSDARG00000088181 117 1.575 - 0.854 0.721 - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
47. ebpl ENSDARG00000036636 79 1.571 - 0.805 - - - - 0.766 - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
48. zgc:112038 ENSDARG00000046140 73 1.57 - 0.802 - - - 0.768 - - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
49. CABZ01117079.1 CABZ01117079.1 123 1.568 - 0.776 - - - - - - 0.792
50. pkmyt1 ENSDARG00000074730 213 1.568 - 0.729 0.839 - - - - - - protein kinase, membrane associated tyrosine/threonine 1 [Source:ZFIN;Acc:ZDB-GENE-060810-80]
51. map3k4 ENSDARG00000104835 34 1.558 - 0.846 - - - 0.712 - - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
52. ism2 ism2 153 1.558 - - - - - - 0.732 0.826 -
53. gpr56 gpr56 523 1.547 - - - - - 0.701 - 0.846 -
54. PLCL2 ENSDARG00000098826 596 1.54 - - - - - - 0.764 - 0.776 phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
55. ndor1 ENSDARG00000007429 113 1.539 - 0.752 - - - - 0.787 - - NADPH dependent diflavin oxidoreductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1555]
56. zgc:113220 ENSDARG00000014775 235 1.499 - 0.711 - - - - 0.788 - - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
57. CU683898.1 CU683898.1 203 1.499 - - - - - 0.784 - - 0.715
58. rsg1 168 1.489 - 0.749 0.740 - - - - - - REM2 and RAB-like small GTPase 1, transcript variant X1
59. CABZ01087514.1 ENSDARG00000090861 245 1.485 - - 0.775 - - 0.710 - - - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
60. fam155b ENSDARG00000060152, ENSDARG00000114398 221 1.468 - - - - 0.701 - 0.767 - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
61. ddit3 ENSDARG00000059836 334 1.453 - - 0.742 - - - - 0.711 - DNA-damage-inducible transcript 3 [Source:ZFIN;Acc:ZDB-GENE-070410-90]
62. snx27b ENSDARG00000016977 2768 1.41 - - 0.707 - - - 0.703 - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
63. CR388046.3 ENSDARG00000105537 108 1 - - - - - - 1.000 - -
64. CSMD1 CSMD1 15 1 - - - - - - 1.000 - -
65. FP085391.2 FP085391.2 85 1 - - - - - - 1.000 - -
66. C2CD3 ENSDARG00000074137 51 1 - - - - - - 1.000 - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
67. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - - - - - - 1.000 - -
68. wdr17 ENSDARG00000075098 83 1 - - - - - - 1.000 - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
69. CR759791.1 ENSDARG00000088591 160 1 - - - - - - 1.000 - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
70. zgc:175107 ENSDARG00000075417 39 1 - - - - - - 1.000 - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
71. slc24a4b ENSDARG00000067509 33 0.985 - 0.985 - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
72. adra2a ENSDARG00000040841, ENSDARG00000111717, ENSDARG00000114002 44 0.985 - 0.985 - - - - - - - adrenoceptor alpha 2A [Source:ZFIN;Acc:ZDB-GENE-021010-1]
73. zgc:174315 ENSDARG00000079222 180 0.973 - 0.973 - - - - - - - zgc:174315 [Source:ZFIN;Acc:ZDB-GENE-080219-29]
74. zc3h10 ENSDARG00000030335 236 0.972 - 0.972 - - - - - - - zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
75. d2hgdh ENSDARG00000060210 362 0.972 - - - - - - - 0.972 - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
76. wu:fj08f03 wu:fj08f03 1337 0.97 - - 0.970 - - - - - -
77. CR847504.1 ENSDARG00000102515 29 0.969 - - - - - - 0.969 - -
78. frmd4bb ENSDARG00000076496 18 0.969 - - - - - - - 0.969 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
79. CR854923.1 CR854923.1 18 0.969 - - - - - - 0.969 - -
80. tbx18 ENSDARG00000036930 390 0.969 - - - - - - 0.969 - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
81. NGFR NGFR 186 0.968 - - - - - - - 0.968 -
82. SVEP1 ENSDARG00000013526 16 0.967 - - 0.967 - - - - - - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110726-1]
83. ngfrb ENSDARG00000089223, ENSDARG00000115390 41 0.967 - - 0.967 - - - - - - nerve growth factor receptor b [Source:ZFIN;Acc:ZDB-GENE-070606-2]
84. CABZ01022254.1 CABZ01022254.1 9 0.966 - - 0.966 - - - - - -
85. si:ch73-27e22.3 ENSDARG00000077263 10 0.966 - - 0.966 - - - - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
86. zgc:153896 ENSDARG00000003977 142 0.966 - 0.966 - - - - - - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
87. si:dkey-24i24.3 ENSDARG00000088452 27 0.966 - - 0.966 - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
88. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.964 - - - - - - - 0.964 - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
89. cyp2k8 ENSDARG00000101190 69 0.962 - - - - - - - 0.962 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
90. smyd3 ENSDARG00000058050 69 0.961 - - - - - - - 0.961 - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
91. ZNF337_20 ZNF337_20 65 0.96 - - 0.960 - - - - - -
92. si:dkey-164n2.1 47 0.96 - - 0.960 - - - - - - si:dkey-164n2.1, transcript variant X1
93. zgc:162180 zgc:162180 31 0.959 - - 0.959 - - - - - -
94. si:ch211-39k3.2 ENSDARG00000075881 531 0.959 - - - - - - - 0.959 - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
95. irf1b ENSDARG00000043249 30 0.958 - - 0.958 - - - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
96. cdc42ep2 ENSDARG00000053959 32 0.958 - - 0.958 - - - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
97. CABZ01027547.1 CABZ01027547.1 128 0.957 - - 0.957 - - - - - -
98. si:dkey-14d8.2 38 0.957 - - - - - - - 0.957 - si:dkey-14d8.2
99. zgc:113294 ENSDARG00000032285 132 0.957 - - - - - - - 0.957 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
100. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 0.956 - - - - - - 0.956 - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]

There are 1443 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA