Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SH3RF3

Gene Name Gene ID Reads Annotation
SH3RF3 ENSDARG00000102334 1 SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]










Genes with expression patterns similar to SH3RF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SH3RF3 ENSDARG00000102334 1 3 1.000 - 1.000 - 1.000 - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2 1.000 - 1.000 - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. fubp3 ENSDARG00000086896 21 1.938 1.000 - 0.938 - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
4. tdo2b ENSDARG00000023176 8 1.806 1.000 - - - 0.806 - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
5. C20H2orf71 C20H2orf71 2 1 - - - - 1.000 - - - -
6. CABZ01046997.2 CABZ01046997.2 7 1 - - - - 1.000 - - - -
7. si:ch211-106g4.2 si:ch211-106g4.2 6 1 - - 1.000 - - - - - -
8. ZNF835 ZNF835 6 1 1.000 - - - - - - - -
9. ZBED1 ZBED1 2 1 - - - - 1.000 - - - -
10. sirt7 ENSDARG00000060645 1 1 - - - - 1.000 - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
11. zgc:77938 ENSDARG00000088366 74 1 1.000 - - - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
12. CR589947.1 ENSDARG00000079269 5 1 - - 1.000 - - - - - -
13. noxo1b ENSDARG00000056374 78 1 1.000 - - - - - - - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
14. LPHN1_1 LPHN1_1 7 1 - - - - 1.000 - - - -
15. CR847844.3 CR847844.3 1 1 1.000 - - - - - - - -
16. crispld1a ENSDARG00000077275 7 1 1.000 - - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
17. rsph4a ENSDARG00000067606 132 1 1.000 - - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
18. CRISP3 CRISP3 0 1 - - 1.000 - - - - - -
19. si:dkey-193b15.5 ENSDARG00000092883 0 1 - - - - 1.000 - - - - si:dkey-193b15.5 [Source:ZFIN;Acc:ZDB-GENE-070912-413]
20. si:ch211-214j24.15 ENSDARG00000063481 8 1 - - 1.000 - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
21. GPR108_1 GPR108_1 2 1 - - 1.000 - - - - - -
22. si:ch211-225h9.2 si:ch211-225h9.2 16 1 1.000 - - - - - - - -
23. VWDE ENSDARG00000103443 10 1 - - 1.000 - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
24. mecom ENSDARG00000060808 8 1 - - 1.000 - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
25. pde11a ENSDARG00000063732 1 1 - - - - 1.000 - - - - phosphodiesterase 11a [Source:ZFIN;Acc:ZDB-GENE-070912-207]
26. IMPG2 IMPG2 1 1 1.000 - - - - - - - -
27. VSTM5 4 1 1.000 - - - - - - - - V-set and transmembrane domain containing 5
28. KCNA2_1 KCNA2_1 15 1 - - - - 1.000 - - - -
29. TNFRSF14_8 TNFRSF14_8 6 1 - - - - 1.000 - - - -
30. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - 1.000 - - - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
31. AL935200.4 AL935200.4 3 1 - - - - 1.000 - - - -
32. si:ch211-209l18.6 si:ch211-209l18.6 0 1 - - - - 1.000 - - - -
33. si:ch211-139g16.8 ENSDARG00000093074 13 1 - - - - 1.000 - - - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
34. nphs1 ENSDARG00000060758 5 1 - - - - 1.000 - - - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
35. c6ast4 ENSDARG00000052578 6 1 - - 1.000 - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
36. CABZ01021454.2 CABZ01021454.2 3 1 - - - - 1.000 - - - -
37. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
38. SNORA30_1 SNORA30_1 0 1 - - 1.000 - - - - - -
39. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
40. PTCHD2 PTCHD2 2 1 1.000 - - - - - - - -
41. si:dkey-95o3.4 si:dkey-95o3.4 0 1 - - 1.000 - - - - - -
42. celsr3 ENSDARG00000055825 1 1 - - - - 1.000 - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
43. cx27.5 ENSDARG00000035553 12 1 - - 1.000 - - - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
44. radil ENSDARG00000079779 14 1 - - - - 1.000 - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
45. smtlb ENSDARG00000017251 7 1 - - - - 1.000 - - - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
46. CABZ01080435.1 CABZ01080435.1 1 1 - - - - 1.000 - - - -
47. mat2ab ENSDARG00000037121 0 1 - - 1.000 - - - - - - methionine adenosyltransferase II, alpha b [Source:ZFIN;Acc:ZDB-GENE-050327-6]
48. si:ch73-280o22.2 ENSDARG00000077072 67 1 1.000 - - - - - - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
49. nid2b ENSDARG00000009471 4 1 - - - - 1.000 - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
50. gabbr1a ENSDARG00000018967 2 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
51. smpdl3a ENSDARG00000053119 1 1 - - - - 1.000 - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
52. si:ch211-218d20.10 si:ch211-218d20.10 4 1 1.000 - - - - - - - -
53. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
54. CABZ01113899.1 CABZ01113899.1 11 1 - - 1.000 - - - - - -
55. U12 U12 14 1 - - - - 1.000 - - - -
56. CU638737.1 CU638737.1 17 1 - - - - 1.000 - - - -
57. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
58. CABZ01090951.1 CABZ01090951.1 78 1 1.000 - - - - - - - -
59. DDX47 ENSDARG00000102353 0 1 - - 1.000 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:ZFIN;Acc:ZDB-GENE-050522-359]
60. si:ch211-28e16.5 ENSDARG00000093376 2 1 - - - - 1.000 - - - - si:ch211-28e16.5 [Source:ZFIN;Acc:ZDB-GENE-090313-111]
61. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 1.000 - - - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
62. si:ch211-277g23.4 si:ch211-277g23.4 0 1 - - - - 1.000 - - - -
63. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - - - 1.000 - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
64. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 1.000 - - - - - - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
65. zzef1 ENSDARG00000094380 4 1 - - - - 1.000 - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
66. lcmt2 ENSDARG00000000747, ENSDARG00000110257 97 1 1.000 - - - - - - - - leucine carboxyl methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-110714-2]
67. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - 1.000 - - - - - -
68. CABZ01079258.1 CABZ01079258.1 3 1 - - - - 1.000 - - - -
69. plscr3a ENSDARG00000093078 7 1 - - 1.000 - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
70. hs6st3b ENSDARG00000069500 5 1 1.000 - - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
71. PLD1 PLD1 158 1 1.000 - - - - - - - -
72. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1 1.000 - - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
73. CR942805.1 CR942805.1 94 1 - - - - 1.000 - - - -
74. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
75. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1 - - 1.000 - - - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
76. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 1.000 - - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
77. BX601644.1 ENSDARG00000090632 2 1 - - - - 1.000 - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
78. zgc:172109 zgc:172109 0 1 - - - - 1.000 - - - -
79. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
80. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 1 - - 1.000 - - - - - -
81. si:ch211-266a5.12 ENSDARG00000092714 10 1 - - - - 1.000 - - - - si:ch211-266a5.12 [Source:ZFIN;Acc:ZDB-GENE-081104-210]
82. HIPK1 HIPK1 8 1 - - 1.000 - - - - - -
83. PLBD1 ENSDARG00000063313 1 1 1.000 - - - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
84. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
85. ZAN ZAN 11 1 - - - - 1.000 - - - -
86. si:dkey-256e7.8 ENSDARG00000092022 4 1 - - 1.000 - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
87. ENSDARG00000095340 ENSDARG00000095340 8 1 - - 1.000 - - - - - -
88. CR394546.2 ENSDARG00000090061 3 1 1.000 - - - - - - - -
89. pip5k1cb ENSDARG00000100313 3 1 - - 1.000 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
90. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 1.000 - - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
91. mir219-1 101 1 1.000 - - - - - - - - microRNA 219-1
92. arhgap20 ENSDARG00000089326 10 1 - - 1.000 - - - - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
93. CACNA2D1_1 ENSDARG00000073752 2 1 1.000 - - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
94. si:dkey-9i5.5 si:dkey-9i5.5 2 1 - - 1.000 - - - - - -
95. si:ch1073-467m9.2 si:ch1073-467m9.2 2 1 - - - - 1.000 - - - -
96. LIX1 ENSDARG00000052154 9 1 - - 1.000 - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
97. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
98. mir15a-1 36 1 1.000 - - - - - - - - microRNA 15a-1
99. large 9 1 - - 1.000 - - - - - - like-glycosyltransferase, transcript variant X1
100. cacng8a ENSDARG00000020450 32 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]

There are 558 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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