Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HMCES

Gene Name Gene ID Reads Annotation
HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]










Genes with expression patterns similar to HMCES

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
2. BX324003.2 ENSDARG00000109802 178 2.371 - - - 0.932 0.715 - 0.724 - -
3. zgc:171422 ENSDARG00000104715 255 1.841 - - - 0.902 - - 0.939 - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
4. msxa msxa 263 1.788 - - - 0.867 - - - 0.921 -
5. trip4 ENSDARG00000098074 79 1.771 - - - 0.894 - - 0.877 - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
6. si:ch211-154o6.3 ENSDARG00000099846, ENSDARG00000112144 203 1.719 - - - - - - 0.855 0.864 - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
7. THEM4 ENSDARG00000061621 364 1.701 - - - 0.947 - - 0.754 - - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
8. vps13d ENSDARG00000017986 183 1.667 - - - 0.799 - - 0.868 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
9. CABZ01032467.1 CABZ01032467.1 400 1.665 - - - - - - 0.871 0.794 -
10. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.645 - - - 0.867 - - - 0.778 - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
11. PPP1R16B ENSDARG00000079860 390 1.634 - - - - - - 0.787 0.847 - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
12. psmd3 ENSDARG00000018124 540 1.62 - - - 0.834 - 0.786 - - - proteasome 26S subunit, non-ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1444]
13. smad9 368 1.614 - - - - - 0.840 0.774 - - SMAD family member 9, transcript variant X1
14. trove2 ENSDARG00000089225 430 1.612 - - - 0.880 - - 0.732 - - TROVE domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-051113-300]
15. rbm22 ENSDARG00000010238 523 1.604 - - - 0.903 - - - 0.701 - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
16. BX927294.1 BX927294.1 361 1.603 0.750 - - 0.853 - - - - -
17. cry1a cry1a 738 1.601 - - - 0.712 - - - 0.889 -
18. snap47 ENSDARG00000063445 722 1.598 - - - 0.878 - - - 0.720 - synaptosomal-associated protein, 47 [Source:ZFIN;Acc:ZDB-GENE-060825-140]
19. coro2ba ENSDARG00000079440 420 1.592 - 0.767 - - - - - 0.825 - coronin, actin binding protein, 2Ba [Source:ZFIN;Acc:ZDB-GENE-050518-1]
20. CABZ01084942.1 ENSDARG00000100332 69 1.582 - - - - - 0.788 0.794 - -
21. TMEM74 26 1.576 - - - - - 0.844 0.732 - - transmembrane protein 74, transcript variant X3
22. si:dkey-97l20.5 si:dkey-97l20.5 33 1.574 - - - - - 0.840 0.734 - -
23. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.569 - - - - - 0.840 0.729 - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
24. mettl3 ENSDARG00000012827 728 1.569 - - - - - 0.778 0.791 - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
25. wbscr22 wbscr22 644 1.568 - 0.767 - 0.801 - - - - -
26. cyp39a1 ENSDARG00000017982 4 1.566 - - - - - 0.840 0.726 - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
27. mppe1 ENSDARG00000045416 340 1.556 - - - 0.827 - - - 0.729 - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
28. SYNGAP1_1 SYNGAP1_1 66 1.555 - - - - - 0.790 0.765 - -
29. atpaf2 ENSDARG00000056270, ENSDARG00000115757 658 1.534 - - - 0.747 - - 0.787 - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050411-18]
30. slc6a6b ENSDARG00000098438 7 1.53 - 0.757 - - - 0.773 - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
31. tfr1a ENSDARG00000101322 105 1.527 - 0.739 - - - 0.788 - - - transferrin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-041220-1]
32. ube2r2 ENSDARG00000058740 83 1.526 - 0.756 - - - 0.770 - - - ubiquitin-conjugating enzyme E2R 2 [Source:ZFIN;Acc:ZDB-GENE-040718-344]
33. C18H15orf59 C18H15orf59 80 1.524 - - - - - 0.770 0.754 - -
34. MAST3 MAST3 540 1.519 - 0.759 - - - 0.760 - - -
35. thnsl2 ENSDARG00000032584 59 1.514 - 0.726 - - - 0.788 - - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
36. dclk2 dclk2 719 1.483 - 0.710 - - - 0.773 - - -
37. map7d1a_1 ENSDARG00000098802 208 1.475 - - - 0.735 - - 0.740 - - MAP7 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-060503-22]
38. zgc:193790 ENSDARG00000102033 167 1.47 - 0.767 - - - - 0.703 - - zgc:193790 [Source:ZFIN;Acc:ZDB-GENE-080723-55]
39. prickle1a ENSDARG00000040649 700 1.459 - - - 0.722 - - 0.737 - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
40. wdr54 ENSDARG00000010248 245 1.455 - 0.723 - - - - 0.732 - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
41. CR387996.2 CR387996.2 1272 1.451 - - - 0.737 - - 0.714 - -
42. pax3b ENSDARG00000028348 388 1.436 - 0.704 - - - - 0.732 - - paired box 3b [Source:ZFIN;Acc:ZDB-GENE-080917-53]
43. disp1 ENSDARG00000044417 603 1.434 - - - 0.705 - - - 0.729 - dispatched homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030911-7]
44. vangl2 ENSDARG00000027397 2418 1.414 - - - 0.709 - - - 0.705 - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
45. cdt1 ENSDARG00000051854 206 0.957 - - - - - - - 0.957 - chromatin licensing and DNA replication factor 1 [Source:ZFIN;Acc:ZDB-GENE-070111-1]
46. CARD11 ENSDARG00000052741 249 0.941 - - - - - - - 0.941 - caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
47. ttll10 ENSDARG00000090472 36 0.934 - - - - - - - 0.934 - tubulin tyrosine ligase-like family, member 10 [Source:ZFIN;Acc:ZDB-GENE-081104-350]
48. GRM2 GRM2 372 0.933 - - - 0.933 - - - - -
49. htra1b ENSDARG00000014907 146 0.93 - - - - - - - 0.930 - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
50. si:ch211-149a19.3 ENSDARG00000079456 115 0.929 - - - - - - - 0.929 - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
51. rpp21 ENSDARG00000043404, ENSDARG00000109965 469 0.928 - - - - - - 0.928 - - ribonuclease P 21 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-37]
52. cyp2j20 ENSDARG00000094057 44 0.927 - - - - - - - 0.927 - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
53. ms4a17a.2 ENSDARG00000105674 32 0.927 - - - - - - - 0.927 - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
54. CABZ01069020.1 ENSDARG00000105806 19 0.927 - - - - - - - 0.927 - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
55. pus7l_1 ENSDARG00000069780 49 0.927 - - - - - - - 0.927 - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
56. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.927 - - - - - - - 0.927 - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
57. MAL_1 MAL_1 200 0.927 - - - - - - - 0.927 -
58. TTF1_2 TTF1_2 26 0.927 - - - - - - - 0.927 -
59. TRIM35_7 TRIM35_7 22 0.926 - - - - - - - 0.926 -
60. mfsd10 ENSDARG00000086786 304 0.925 - - - - - - - 0.925 - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
61. KBTBD2 ENSDARG00000087226 707 0.925 - - - 0.925 - - - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
62. CABZ01113899.1 CABZ01113899.1 11 0.925 - - - - - - - 0.925 -
63. CABZ01044023.1 ENSDARG00000117734 240 0.924 - - - - - - - 0.924 -
64. NMUR1 NMUR1 30 0.923 - - - - - - - 0.923 -
65. si:dkey-106l3.7 ENSDARG00000093444 29 0.923 - - - - - - - 0.923 - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
66. RNF130 ENSDARG00000089767 559 0.922 - - - - - - - 0.922 - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
67. emx3 ENSDARG00000020417 85 0.922 - - - - - - - 0.922 - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
68. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 0.922 - - - - - - - 0.922 - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
69. arhgap22 ENSDARG00000021255 117 0.922 - - - - - - - 0.922 - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
70. cers4a ENSDARG00000031387 19 0.921 - - - - - - - 0.921 - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
71. raf1b ENSDARG00000059406 301 0.921 - - - 0.921 - - - - - Raf-1 proto-oncogene, serine/threonine kinase b [Source:ZFIN;Acc:ZDB-GENE-090826-2]
72. tmem144a ENSDARG00000037409, ENSDARG00000110998, ENSDARG00000112588, ENSDARG00000116960 64 0.92 - - - - - - - 0.920 - transmembrane protein 144a [Source:ZFIN;Acc:ZDB-GENE-040822-12]
73. golga2 ENSDARG00000063197 30 0.92 - - - - - - - 0.920 - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
74. DDX24 ENSDARG00000104708 861 0.92 - - - - - - 0.920 - - DEAD (Asp-Glu-Ala-Asp) box helicase 24 [Source:ZFIN;Acc:ZDB-GENE-100716-4]
75. micu2 ENSDARG00000009939 557 0.92 - - - 0.920 - - - - - mitochondrial calcium uptake 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3374]
76. si:ch211-147d7.5 ENSDARG00000095457 132 0.919 - - - - - - - 0.919 - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
77. C19H18orf21 C19H18orf21 338 0.919 - - - - - - - 0.919 -
78. TMEM128 552 0.918 - - - 0.918 - - - - - transmembrane protein 128
79. C9H3orf38 C9H3orf38 83 0.918 - - - - - - - 0.918 -
80. gdf6a ENSDARG00000053479 121 0.912 - - - - - - - 0.912 - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
81. bloc1s4 ENSDARG00000007597 365 0.912 - - - - - - 0.912 - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:ZFIN;Acc:ZDB-GENE-040801-215]
82. CRP CRP 136 0.912 - - - - - - - 0.912 -
83. myh7ba ENSDARG00000076075 140 0.911 - - - - - - - 0.911 - myosin, heavy chain 7B, cardiac muscle, beta a [Source:ZFIN;Acc:ZDB-GENE-100914-2]
84. rxrba ENSDARG00000078954 85 0.911 - - - - - - - 0.911 - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
85. CU929133.1 CU929133.1 94 0.911 - - - - - - - 0.911 -
86. trim35-27 ENSDARG00000035009 62 0.911 - - - - - - - 0.911 - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
87. HHIPL2 ENSDARG00000060008 162 0.91 - - - - - - - 0.910 - HHIP-like 2 [Source:ZFIN;Acc:ZDB-GENE-131120-145]
88. pik3cg ENSDARG00000017757 157 0.909 - - - - - - - 0.909 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
89. MYO9B ENSDARG00000078313 97 0.909 - - - - - - - 0.909 - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
90. acot8 ENSDARG00000014138 89 0.908 - - - - - - - 0.908 - acyl-CoA thioesterase 8 [Source:ZFIN;Acc:ZDB-GENE-041010-174]
91. CU856359.2 CU856359.2 182 0.908 - - - - - - - 0.908 -
92. slc25a15a ENSDARG00000063539 50 0.908 - - - - - - - 0.908 - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
93. traip ENSDARG00000011262 410 0.908 - - - - - - - 0.908 - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
94. dpm1 ENSDARG00000057011, ENSDARG00000112573 1089 0.907 - - - - - - - 0.907 - dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-115]
95. gpx1b ENSDARG00000006207 67 0.906 - - - - - - - 0.906 - glutathione peroxidase 1b [Source:ZFIN;Acc:ZDB-GENE-040912-60]
96. mogat3b ENSDARG00000003635 394 0.906 - - - - - - - 0.906 - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
97. zgc:112484 zgc:112484 780 0.906 - - - - - - - 0.906 -
98. hacl1 ENSDARG00000020529 228 0.905 - - - - - - - 0.905 - 2-hydroxyacyl-CoA lyase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2058]
99. mgat1a ENSDARG00000012407 605 0.904 - - - 0.904 - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040426-1515]
100. dhrs13a.2 ENSDARG00000111240 491 0.904 - - - - - - - 0.904 - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]

There are 1371 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA