Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rpp21

Gene Name Gene ID Reads Annotation
rpp21 ENSDARG00000043404, ENSDARG00000109965 469 ribonuclease P 21 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-37]










Genes with expression patterns similar to rpp21

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rpp21 ENSDARG00000043404, ENSDARG00000109965 469 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonuclease P 21 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-37]
2. BX465203.2 BX465203.2 23 1.712 - 0.801 - - - 0.911 - - -
3. si:dkey-46m10.3 si:dkey-46m10.3 246 1.685 - 0.811 - - - - 0.874 - -
4. NFRKB ENSDARG00000091512 646 1.644 - - - 0.760 - - 0.884 - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
5. pld2 ENSDARG00000034262 952 1.552 - 0.773 - - - - 0.779 - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
6. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 1.543 - 0.775 - - - - 0.768 - - cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
7. zgc:193742 ENSDARG00000092387, ENSDARG00000115140, ENSDARG00000116906 653 1.514 - 0.794 - 0.720 - - - - - zgc:193742 [Source:ZFIN;Acc:ZDB-GENE-081022-37]
8. SLC41A2 SLC41A2 202 1.513 - 0.757 - - - - 0.756 - -
9. si:ch73-127k6.1 si:ch73-127k6.1 114 1.511 - - - 0.713 - 0.798 - - -
10. raph1 raph1 442 1.507 - 0.747 - - - - 0.760 - -
11. THEM4 ENSDARG00000061621 364 1.505 - - - - - 0.797 0.708 - - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
12. srd5a3 ENSDARG00000043307 142 1.495 - - - 0.708 - - 0.787 - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
13. CABZ01025393.1 CABZ01025393.1 37 1.462 - - - 0.709 - 0.753 - - -
14. cep97 ENSDARG00000102407 1154 1.455 - 0.710 - 0.745 - - - - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
15. zbtb25 ENSDARG00000042383 94 1.448 - - - - - 0.704 0.744 - - zinc finger and BTB domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-041001-125]
16. hectd3 ENSDARG00000038905 1170 1.436 - 0.730 - - - - 0.706 - - HECT domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-031118-179]
17. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 0.928 - - - - - - 0.928 - - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
18. cep70 ENSDARG00000076965 140 0.926 - - - - - - 0.926 - - centrosomal protein 70 [Source:ZFIN;Acc:ZDB-GENE-070705-311]
19. CT030204.3 CT030204.3 486 0.926 - 0.926 - - - - - - -
20. acap3b ENSDARG00000099240 24 0.926 - - - - - - 0.926 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b [Source:ZFIN;Acc:ZDB-GENE-070209-274]
21. xrcc5 ENSDARG00000099298 835 0.916 - 0.916 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
22. kif16ba ENSDARG00000100225 114 0.902 - - - - - 0.902 - - - kinesin family member 16Ba [Source:ZFIN;Acc:ZDB-GENE-090313-233]
23. vps13d ENSDARG00000017986 183 0.899 - - - - - - 0.899 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
24. als2a ENSDARG00000075111 29 0.892 - - - - - - 0.892 - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
25. CABZ01084942.1 ENSDARG00000100332 69 0.892 - - - - - - 0.892 - -
26. ercc5 ENSDARG00000023678 468 0.885 - - - - - - 0.885 - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
27. cdc45 ENSDARG00000043720 353 0.881 - 0.881 - - - - - - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
28. agxt2 ENSDARG00000100709 799 0.88 - - - - - - 0.880 - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
29. polr1c ENSDARG00000039400 606 0.876 - 0.876 - - - - - - - RNA polymerase I and III subunit C [Source:ZFIN;Acc:ZDB-GENE-040426-1495]
30. sh3glb2a ENSDARG00000008983 452 0.875 - 0.875 - - - - - - - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
31. CABZ01080457.1 CABZ01080457.1 445 0.873 - - - - - - 0.873 - -
32. zgc:171422 ENSDARG00000104715 255 0.873 - - - - - - 0.873 - - zgc:171422 [Source:ZFIN;Acc:ZDB-GENE-080204-95]
33. grk4 ENSDARG00000070448 146 0.872 - - - - - 0.872 - - - G protein-coupled receptor kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-1198]
34. DDX24 ENSDARG00000104708 861 0.872 - - - - - - 0.872 - - DEAD (Asp-Glu-Ala-Asp) box helicase 24 [Source:ZFIN;Acc:ZDB-GENE-100716-4]
35. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 0.87 - 0.870 - - - - - - - ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
36. CABZ01032467.1 CABZ01032467.1 400 0.867 - - - - - - 0.867 - -
37. ptn ENSDARG00000102340 229 0.865 - - - - - 0.865 - - - pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
38. NAT6 121 0.865 - - - - - 0.865 - - - N-acetyltransferase 6
39. hoga1 ENSDARG00000018944 800 0.863 - 0.863 - - - - - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
40. nudt17 ENSDARG00000008014 479 0.862 - 0.862 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
41. RNF4 ENSDARG00000090993 688 0.862 - 0.862 - - - - - - - ring finger protein 4 [Source:ZFIN;Acc:ZDB-GENE-041008-246]
42. nek2 ENSDARG00000005619 273 0.86 - 0.860 - - - - - - - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
43. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 0.86 0.860 - - - - - - - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
44. tm4sf4 ENSDARG00000040747 65 0.859 - 0.859 - - - - - - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
45. znf395b ENSDARG00000024195 342 0.859 - - - - - 0.859 - - - zinc finger protein 395b [Source:ZFIN;Acc:ZDB-GENE-041001-193]
46. si:ch211-89o9.6 ENSDARG00000075639 382 0.858 0.858 - - - - - - - - si:ch211-89o9.6 [Source:ZFIN;Acc:ZDB-GENE-030131-7155]
47. CT583625.2 ENSDARG00000094770 57 0.858 - 0.858 - - - - - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
48. SIRT5 ENSDARG00000039684 1124 0.858 - - - 0.858 - - - - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
49. bloc1s4 ENSDARG00000007597 365 0.858 - - - - - - 0.858 - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:ZFIN;Acc:ZDB-GENE-040801-215]
50. FAM210A FAM210A 437 0.857 - 0.857 - - - - - - -
51. mapk6 ENSDARG00000032103 6422 0.857 - 0.857 - - - - - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
52. si:ch211-181d7.3 ENSDARG00000068621 87 0.856 - 0.856 - - - - - - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
53. rnf8 ENSDARG00000044949 751 0.854 - - - 0.854 - - - - - ring finger protein 8, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-849]
54. il13ra1 ENSDARG00000080020 443 0.853 - 0.853 - - - - - - - interleukin 13 receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-103]
55. ank1 ank1 5209 0.852 0.852 - - - - - - - -
56. cep19 ENSDARG00000059175 266 0.851 - 0.851 - - - - - - - centrosomal protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-81]
57. meig1 ENSDARG00000045705, ENSDARG00000114008, ENSDARG00000115242 570 0.85 - 0.850 - - - - - - - meiosis/spermiogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-050320-33]
58. katnbl1 ENSDARG00000042522 1086 0.847 - 0.847 - - - - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
59. COBLL1 COBLL1 14 0.846 - 0.846 - - - - - - -
60. zbtb43 ENSDARG00000045983 343 0.846 - 0.846 - - - - - - - zinc finger and BTB domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-060526-378]
61. si:dkey-72l17.6 ENSDARG00000102008 42 0.844 - - - - - - 0.844 - - si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
62. xrcc4 ENSDARG00000010732 553 0.844 - 0.844 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1755]
63. CU466279.1 CU466279.1 84 0.844 - - - - - - 0.844 - -
64. nhej1 ENSDARG00000058893 172 0.844 - 0.844 - - - - - - - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
65. mak16 ENSDARG00000003527 519 0.843 - - - - - - 0.843 - - MAK16 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-35]
66. zgc:171566 ENSDARG00000105118 340 0.842 - - - - - - 0.842 - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
67. tbrg1 ENSDARG00000074996 733 0.841 - - - - - - 0.841 - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
68. si:ch73-257c13.2 ENSDARG00000074305 197 0.84 - - - - - 0.840 - - - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
69. dio1 ENSDARG00000042112 87 0.839 - - - - - - 0.839 - - iodothyronine deiodinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-41]
70. ITPR1 ITPR1 161 0.839 - 0.839 - - - - - - -
71. gucd1 ENSDARG00000068438, ENSDARG00000111855 438 0.839 - 0.839 - - - - - - - guanylyl cyclase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-872]
72. prpf31 ENSDARG00000095904 526 0.838 - - - - - - 0.838 - - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
73. 5_8S_rRNA_1 5_8S_rRNA_1 563 0.838 - 0.838 - - - - - - -
74. klhl41a ENSDARG00000068888 1034 0.836 0.836 - - - - - - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
75. PREB ENSDARG00000101602 626 0.836 - 0.836 - - - - - - - prolactin regulatory element binding [Source:ZFIN;Acc:ZDB-GENE-040718-385]
76. SALL2 ENSDARG00000075116 527 0.835 - 0.835 - - - - - - - spalt-like transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030829-32]
77. bub1ba ENSDARG00000078825 330 0.834 - - - - - - 0.834 - - BUB1 mitotic checkpoint serine/threonine kinase Ba [Source:ZFIN;Acc:ZDB-GENE-041014-120]
78. kif3b ENSDARG00000101120 1158 0.834 - 0.834 - - - - - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
79. rxrab ENSDARG00000035127 231 0.833 - 0.833 - - - - - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
80. MAL2 ENSDARG00000077637 152 0.833 - 0.833 - - - - - - - mal, T cell differentiation protein 2 (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-081022-204]
81. cog4 ENSDARG00000054264 785 0.832 - - - 0.832 - - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
82. cept1b ENSDARG00000021177 675 0.832 - - - - - - 0.832 - - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
83. thyn1 ENSDARG00000042659, ENSDARG00000113223 459 0.831 - - - - - - 0.831 - - thymocyte nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1585]
84. tmprss15 ENSDARG00000079393 25 0.831 - - - - - - 0.831 - - transmembrane serine protease 15 [Source:ZFIN;Acc:ZDB-GENE-091204-83]
85. gdpd3b ENSDARG00000006944 19 0.83 - - - - - - 0.830 - - glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
86. CABZ01034707.1 CABZ01034707.1 122 0.83 - - - - - - 0.830 - -
87. MSRA ENSDARG00000029587 30 0.83 - - - - - - 0.830 - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
88. CABZ01073740.1 CABZ01073740.1 27 0.83 - - - - - - 0.830 - -
89. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 0.83 - - - - - - 0.830 - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
90. si:dkey-153k10.6 10 0.83 - - - - - - 0.830 - - si:dkey-153k10.6, transcript variant X1
91. ATXN1 ATXN1 12 0.83 - - - - - - 0.830 - -
92. BX511034.2 ENSDARG00000071636 31 0.829 - - - - - 0.829 - - - novel protein similar to vertebrate amiloride-sensitive cation channel 2 neuronal (ACCN2) [Source:NCBI gene;Acc:100151078]
93. larp6 1695 0.829 - - - 0.829 - - - - - La ribonucleoprotein domain family, member 6
94. SNAPC2 ENSDARG00000036473 158 0.828 - - - - - - 0.828 - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
95. tmem88a ENSDARG00000056920 536 0.828 - 0.828 - - - - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
96. si:dkey-61l1.4 ENSDARG00000092567 1012 0.825 - 0.825 - - - - - - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
97. reep3l reep3l 608 0.824 - 0.824 - - - - - - -
98. fam83b ENSDARG00000078309 318 0.824 - 0.824 - - - - - - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
99. trappc6b ENSDARG00000016463 1343 0.824 - 0.824 - - - - - - - trafficking protein particle complex 6b [Source:ZFIN;Acc:ZDB-GENE-041010-122]
100. GDPD2 ENSDARG00000073870 229 0.823 - 0.823 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081107-62]

There are 709 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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