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Results for CCDC88A_1

Gene Name Gene ID Reads Annotation
CCDC88A_1 CCDC88A_1 12










Genes with expression patterns similar to CCDC88A_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CCDC88A_1 CCDC88A_1 12 5 - - - 1.000 - 1.000 1.000 1.000 1.000
2. ppp1r3db ENSDARG00000076248 32 2.495 - - - 0.760 - 1.000 0.735 - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
3. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 2.404 - - - - - 0.844 - 0.804 0.756 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
4. zgc:162402 zgc:162402 298 2.375 - - - - - - 0.708 0.950 0.717
5. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1.879 - - - - - 1.000 - - 0.879 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
6. cx44.1 cx44.1 799 1.802 - - - - - - - 0.962 0.840
7. foxq2 ENSDARG00000071394 3 1.793 - - - - - - - 0.961 0.832 forkhead box Q2 [Source:ZFIN;Acc:ZDB-GENE-050208-663]
8. crygm2d16 ENSDARG00000076790 129 1.79 - - - - - - - 0.962 0.828 crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
9. zgc:86723 zgc:86723 299 1.784 - - - - - - - 0.948 0.836
10. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1.78 - - - - - - - 0.961 0.819 lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
11. crygm2d9 ENSDARG00000115701 28 1.779 - - - - - - - 0.960 0.819 crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
12. crygm2d8 ENSDARG00000116164 698 1.777 - - - - - - - 0.942 0.835 crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
13. si:ch211-212n6.18 si:ch211-212n6.18 233 1.766 - - - - - - - 0.932 0.834
14. crygm2d14 ENSDARG00000087301 66 1.766 - - - - - - - 0.945 0.821 crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
15. mipa ENSDARG00000037285, ENSDARG00000116133 507 1.758 - - - - - - - 0.922 0.836 major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
16. lim2.4 ENSDARG00000015445 791 1.756 - - - - - - - 0.942 0.814 lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
17. cryba1l2 ENSDARG00000014803 47 1.739 - - - - - - - 0.909 0.830 crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
18. crygm2d1 ENSDARG00000087324 258 1.737 - - - - - - - 0.901 0.836 crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
19. zgc:165347_1 zgc:165347_1 69 1.734 - - - - - - - 0.921 0.813
20. ggt1a ENSDARG00000023526 26 1.723 - - - - - - - 0.884 0.839 gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
21. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 1.721 - - - - - - - 0.902 0.819 crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
22. crygmxl1 ENSDARG00000018797 7 1.717 - - - - - - - 0.899 0.818 crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
23. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 1.715 - - - - - - - 0.949 0.766 crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
24. dnase1l3l dnase1l3l 16 1.711 - - - - - - - 0.881 0.830
25. cps1 ENSDARG00000020028 67 1.696 - - - - - - - 0.859 0.837 carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
26. mipb ENSDARG00000013963 753 1.695 - - - - - - - 0.871 0.824 major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
27. cryba2a ENSDARG00000030349 1342 1.693 - - - - - - - 0.920 0.773 crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
28. crygm2d10 ENSDARG00000087765 358 1.686 - - - - - - - 0.924 0.762 crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
29. zgc:110053 zgc:110053 69 1.679 - - - - - - - 0.868 0.811
30. si:ch211-212n6.16 si:ch211-212n6.16 314 1.677 - - - - - - - 0.927 0.750
31. pax6l pax6l 54 1.676 - - - - - - - 0.974 0.702
32. cx50.5 cx50.5 15 1.675 - - - - - - - 0.843 0.832
33. cryaa ENSDARG00000053502, ENSDARG00000113469 80 1.67 - - - - - - - 0.846 0.824 crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
34. crygm2d6 ENSDARG00000073874 38 1.668 - - - - - - - 0.845 0.823 crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
35. crygm2d15 ENSDARG00000069826 48 1.662 - - - - - - - 0.850 0.812 crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
36. zfpm2b ENSDARG00000100560 125 1.654 - - - - - 0.844 0.810 - - zinc finger protein, FOG family member 2b [Source:ZFIN;Acc:ZDB-GENE-060130-5]
37. lctla ENSDARG00000036139, ENSDARG00000116316 32 1.65 - - - - - - - 0.844 0.806 lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
38. cryba1l1 ENSDARG00000032929 1868 1.649 - - - - - - - 0.863 0.786 crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
39. lim2.5 ENSDARG00000041295 56 1.646 - - - - - - - 0.918 0.728 lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
40. nrl ENSDARG00000100466 41 1.646 - - - - - - - 0.813 0.833 neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
41. SLC38A8 SLC38A8 17 1.644 - - - - - 0.799 - 0.845 -
42. sparcl1 ENSDARG00000074989 80 1.641 - - - - - - - 0.931 0.710 SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
43. si:dkey-21o19.2 ENSDARG00000088900 52 1.64 - - - - - - - 0.903 0.737 si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
44. si:ch211-219a15.3 ENSDARG00000087659 12 1.639 - - - - - - - 0.836 0.803 si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
45. cx23 ENSDARG00000054150 115 1.638 - - - - - - - 0.844 0.794 connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
46. crygmxl2 ENSDARG00000074001 282 1.637 - - - - - - - 0.919 0.718 crystallin, gamma MX, like 2 [Source:ZFIN;Acc:ZDB-GENE-050522-401]
47. si:ch211-274p24.3 si:ch211-274p24.3 72 1.634 - - - - - - - 0.898 0.736
48. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1.621 - - - - - - - 0.814 0.807 prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
49. crybb1l1 ENSDARG00000007576 1020 1.612 - - - - - - - 0.802 0.810 crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
50. lim2.3 ENSDARG00000037402 302 1.608 - - - - - - - 0.893 0.715 lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
51. ahr1b ENSDARG00000023537 44 1.596 - - - - - - - 0.881 0.715 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
52. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.593 - - - - - - - 0.776 0.817 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
53. otc ENSDARG00000062147 95 1.592 - - - - - - - 0.759 0.833 ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
54. capn3a ENSDARG00000041864 89 1.592 - - - - - - - 0.760 0.832 calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
55. crybb1l3 ENSDARG00000007655 33 1.579 - - - - - - - 0.750 0.829 crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
56. grifin ENSDARG00000033382 141 1.549 - - - - - - - 0.731 0.818 galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
57. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.527 - - - - - 0.804 - - 0.723 shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
58. ptf1a ENSDARG00000014479 349 1.524 - - - - - - - 0.733 0.791 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
59. hes2.2 ENSDARG00000068168 197 1.457 - - - - - - - 0.716 0.741 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
60. ndrg1b ENSDARG00000010420 116 1.448 - - - - - - - 0.732 0.716 N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
61. rorb ENSDARG00000033498 544 1.425 - - - - - - - 0.720 0.705 RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
62. ctdnep1b ENSDARG00000035781 65 1 - - - - - 1.000 - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
63. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - 1.000 - - -
64. slc35f3a ENSDARG00000075909 1 1 - - - - - 1.000 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
65. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - 1.000 - - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
66. AL935186.3 ENSDARG00000109223 19 1 - - - - - 1.000 - - -
67. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 1 - - - - - 1.000 - - -
68. rnasel2 ENSDARG00000043196 0 1 - - - - - 1.000 - - - ribonuclease like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-420]
69. si:ch211-274k16.9 ENSDARG00000095918 1 1 - - - - - 1.000 - - - si:ch211-274k16.9 [Source:ZFIN;Acc:ZDB-GENE-110408-30]
70. hapln4 ENSDARG00000018542 10 1 - - - - - 1.000 - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
71. EPHB1 ENSDARG00000076757 20 1 - - - - - 1.000 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
72. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - 1.000 - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
73. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - - 1.000 - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
74. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - - - - - 1.000 - - -
75. TMBIM1 TMBIM1 2 1 - - - - - 1.000 - - -
76. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - 1.000 - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
77. si:dkey-57l19.1 ENSDARG00000098143 1 1 - - - - - 1.000 - - - si:dkey-57l19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-171]
78. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1 - - - - - 1.000 - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
79. PRKD2_1 PRKD2_1 1 1 - - - - - 1.000 - - -
80. gng8 ENSDARG00000042970 117 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
81. ppm1na ENSDARG00000010231 3 1 - - - - - 1.000 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
82. SLC16A1 SLC16A1 37 1 - - - - - 1.000 - - -
83. dnajc17 ENSDARG00000104959 70 1 - - - - - 1.000 - - - DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:ZFIN;Acc:ZDB-GENE-040426-894]
84. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1 - - - - - 1.000 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
85. top3b ENSDARG00000027586 8 1 - - - - - 1.000 - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
86. tmem176l.2 ENSDARG00000089399 22 1 - - - - - 1.000 - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
87. TMEM55B TMEM55B 76 1 - - - - - 1.000 - - -
88. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - 1.000 - - -
89. si:dkey-219e20.3 si:dkey-219e20.3 1 1 - - - - - 1.000 - - -
90. CU915534.1 ENSDARG00000105830 1 1 - - - - - 1.000 - - -
91. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - 1.000 - - - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
92. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - - - - - 1.000 - - -
93. DEF6 DEF6 19 1 - - - - - 1.000 - - -
94. si:dkey-4e4.1 ENSDARG00000096026, ENSDARG00000109251 48 1 - - - - - 1.000 - - - si:dkey-4e4.1 [Source:ZFIN;Acc:ZDB-GENE-110914-73]
95. rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 1 - - - - - 1.000 - - - ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]
96. CCL19 CCL19 6 1 - - - - - 1.000 - - -
97. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - - - - - 1.000 - - -
98. cnr1 ENSDARG00000009020 33 1 - - - - - 1.000 - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
99. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
100. zgc:174704 10 1 - - - - - 1.000 - - - zgc:174704, transcript variant X2

There are 474 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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