Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for 5S_rRNA_15

Gene Name Gene ID Reads Annotation
5S_rRNA_15 5S_rRNA_15 9










Genes with expression patterns similar to 5S_rRNA_15

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. 5S_rRNA_15 5S_rRNA_15 9 6 - 1.000 - 1.000 1.000 1.000 - 1.000 1.000
2. skor1a ENSDARG00000069030 19 2 - 1.000 - - - 1.000 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
3. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1.938 - 1.000 - - - - - - 0.938 ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
4. si:ch211-210h11.7 si:ch211-210h11.7 32 1.906 - 0.921 - - - - - 0.985 -
5. CR855327.1 CR855327.1 6 1.904 - 0.921 - - - - - - 0.983
6. SLC37A4 SLC37A4 10 1.888 - 1.000 - - - 0.888 - - -
7. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.877 - 1.000 - - - 0.877 - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
8. tcf3a ENSDARG00000005915 12 1.873 - 0.917 - - - - - - 0.956 transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
9. CR936975.1 ENSDARG00000096862 22 1.857 - - - - - 0.868 - 0.989 -
10. BX539307.1 ENSDARG00000071588 2 1.855 - 1.000 - 0.855 - - - - -
11. si:ch211-259i2.2 si:ch211-259i2.2 45 1.855 - 1.000 - - - - - 0.855 -
12. JAKMIP1 ENSDARG00000076090 55 1.806 - - - - - 1.000 - 0.806 - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
13. si:ch211-128b10.4 si:ch211-128b10.4 3 1.806 - - - - 0.806 1.000 - - -
14. DENND1C DENND1C 1 1.806 - 1.000 - - 0.806 - - - -
15. calhm3 ENSDARG00000079602 4 1.795 - - - - 0.806 - - 0.989 - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
16. ACSL6 12 1.793 - - - - - 1.000 - - 0.793 acyl-CoA synthetase long-chain family member 6
17. CABZ01072853.1 CABZ01072853.1 35 1.787 - - - - 0.806 - - 0.981 -
18. bbs12 ENSDARG00000016112 38 1.773 - 0.921 - - - 0.852 - - - Bardet-Biedl syndrome 12 [Source:ZFIN;Acc:ZDB-GENE-070626-3]
19. NF1 NF1 62 1.736 - 0.847 - - - - - 0.889 -
20. Mar-08 Mar-08 52 1.716 - 0.754 - - - 0.962 - - -
21. npffl ENSDARG00000045016 34 1.709 - 1.000 - - - - - 0.709 - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
22. si:dkey-4c15.6 si:dkey-4c15.6 6 1.702 - 0.702 - - - 1.000 - - -
23. nsmfa ENSDARG00000060025 70 1.671 - 0.730 - - - 0.941 - - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
24. GEMIN6 ENSDARG00000105394 130 1.651 - 0.767 - - - - - 0.884 - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
25. trim3a ENSDARG00000063711 44 1.648 - 0.906 - - - 0.742 - - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
26. galnt14 ENSDARG00000023448 102 1.644 - 0.800 - - - 0.844 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
27. KCNJ10 KCNJ10 62 1.63 - - - 0.851 - 0.779 - - -
28. mybpc1 ENSDARG00000045560 26 1.627 - - - - 0.739 - - 0.888 - myosin binding protein C, slow type [Source:ZFIN;Acc:ZDB-GENE-041114-196]
29. stat3 ENSDARG00000022712 346 1.585 - - - 0.727 - 0.858 - - - signal transducer and activator of transcription 3 (acute-phase response factor) [Source:ZFIN;Acc:ZDB-GENE-980526-68]
30. CABZ01036951.1 CABZ01036951.1 71 1.574 - 0.754 - - - - - 0.820 -
31. mmrn2a ENSDARG00000076135 37 1.523 - 0.764 - 0.759 - - - - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
32. bhlha15 ENSDARG00000045166 67 1.505 - - - - - 0.731 - 0.774 - basic helix-loop-helix family, member a15 [Source:ZFIN;Acc:ZDB-GENE-070803-3]
33. znf366 ENSDARG00000040116 168 1.498 - - - - - 0.758 - 0.740 - zinc finger protein 366 [Source:ZFIN;Acc:ZDB-GENE-110408-46]
34. si:dkey-263m6.1 si:dkey-263m6.1 140 1.481 - 0.767 - - - 0.714 - - -
35. ZNF208 ZNF208 121 1.431 - 0.727 - - - 0.704 - - -
36. GPR35 GPR35 32 1.422 - 0.710 - - - 0.712 - - -
37. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
38. GPR114 GPR114 1 1 - - - - - 1.000 - - -
39. RIC3_1 ENSDARG00000105549 2 1 - - - - - 1.000 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
40. zgc:77112 ENSDARG00000015657 24 1 - - - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
41. ZNF337_16 ZNF337_16 22 1 - - - - - 1.000 - - -
42. BX323448.1 ENSDARG00000116236 10 1 - - - - - 1.000 - - -
43. crygm2d14 ENSDARG00000087301 66 1 - - - - - 1.000 - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
44. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
45. trim35-38 trim35-38 3 1 - 1.000 - - - - - - -
46. zgc:92249 14 1 - - - - - 1.000 - - - zgc:92249
47. si:ch211-207c7.6 si:ch211-207c7.6 23 1 - - - - - 1.000 - - -
48. nr1d4a ENSDARG00000031161 24 1 - - - - - 1.000 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
49. GABRA3 ENSDARG00000090883 5 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
50. npy4r ENSDARG00000043341, ENSDARG00000113787 1 1 - - - - - 1.000 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
51. si:dkeyp-33c10.5 11 1 - - - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
52. zgc:165582 ENSDARG00000074362 198 1 - - - - - 1.000 - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
53. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - 1.000 - - - - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
54. pygo1 ENSDARG00000098687 4 1 - - - - - 1.000 - - - pygopus family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-080204-62]
55. CABZ01034707.1 CABZ01034707.1 122 1 - 1.000 - - - - - - -
56. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
57. chrm2a ENSDARG00000098612 5 1 - - - - - 1.000 - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
58. BX248324.1 ENSDARG00000096489 3 1 - - - - - 1.000 - - -
59. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
60. TDRD6 ENSDARG00000070052 1 1 - - - - - 1.000 - - - tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
61. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
62. eif4e1b ENSDARG00000014565 12 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
63. FAM177A1 ENSDARG00000079636 19 1 - - - - - 1.000 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
64. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - 1.000 - - - - - - -
65. nmu ENSDARG00000043299 67 1 - - - - - 1.000 - - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
66. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
67. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
68. klc4_1 ENSDARG00000086985 22 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
69. FNBP1_1 FNBP1_1 3 1 - 1.000 - - - - - - -
70. ccdc79 2 1 - - - - 1.000 - - - - coiled-coil domain containing 79
71. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
72. mapk9 ENSDARG00000077364 38 1 - - - - - 1.000 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
73. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
74. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
75. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
76. CU571315.2 ENSDARG00000101956 15 1 - 1.000 - - - - - - -
77. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
78. RBBP6_1 RBBP6_1 1 1 - - - - 1.000 - - - -
79. trim9 ENSDARG00000039123 53 1 - - - - - 1.000 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
80. prepl ENSDARG00000017853, ENSDARG00000114415 4 1 - - - - - 1.000 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
81. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
82. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
83. ncf1 ENSDARG00000033735 83 1 - 1.000 - - - - - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
84. barhl1b ENSDARG00000019013, ENSDARG00000113145 101 1 - - - - - 1.000 - - - BarH-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-060118-2]
85. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
86. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
87. pcdh2g8 2 1 - - - - 1.000 - - - - protocadherin 2 gamma 8
88. serpinb1l2 ENSDARG00000070396 37 1 - - - - - - - - 1.000 serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
89. HIST1H4J HIST1H4J 31 1 - - - - - 1.000 - - -
90. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
91. FBLN7 ENSDARG00000089519 4 1 - - - - - 1.000 - - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
92. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - 1.000 - - -
93. nceh1b nceh1b 22 1 - 1.000 - - - - - - -
94. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
95. tnk2b ENSDARG00000104409 1 1 - - - - - 1.000 - - - tyrosine kinase, non-receptor, 2b [Source:ZFIN;Acc:ZDB-GENE-110411-165]
96. si:dkey-28d5.13 ENSDARG00000077260 3 1 - 1.000 - - - - - - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
97. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - 1.000 - - - leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
98. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
99. spi1b ENSDARG00000000767 88 1 - 1.000 - - - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
100. ncanb ENSDARG00000005783 22 1 - - - - - 1.000 - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]

There are 969 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA