Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Atg4c

Gene Name Gene ID Reads Annotation
Atg4c ENSMUSG00000028550 266 autophagy related 4C, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2651854]







Genes with expression patterns similar to Atg4c

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Atg4c ENSMUSG00000028550 266 6 1.000 1.000 1.000 1.000 1.000 1.000 autophagy related 4C, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2651854]
2. Fam189a2 ENSMUSG00000071604 71 1.647 0.829 - 0.818 - - - family with sequence similarity 189, member A2 [Source:MGI Symbol;Acc:MGI:2685813]
3. Tmem170 ENSMUSG00000031953 67 1.642 0.848 - 0.794 - - - transmembrane protein 170 [Source:MGI Symbol;Acc:MGI:106426]
4. Mapk13 ENSMUSG00000004864 123 0.908 0.908 - - - - - mitogen-activated protein kinase 13 [Source:MGI Symbol;Acc:MGI:1346864]
5. Gm12704 ENSMUSG00000081030 53 0.889 - - 0.889 - - - predicted gene 12704 [Source:MGI Symbol;Acc:MGI:3650671]
6. Hps6 ENSMUSG00000074811 74 0.856 0.856 - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:MGI Symbol;Acc:MGI:2181763]
7. Snora75 ENSMUSG00000064837 33 0.856 0.856 - - - - - small nucleolar RNA, H/ACA box 75 [Source:MGI Symbol;Acc:MGI:3819511]
8. Abcc9 ENSMUSG00000030249 487 0.855 - - 0.855 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:MGI Symbol;Acc:MGI:1352630]
9. Cpne4 ENSMUSG00000032564 37 0.854 0.854 - - - - - copine IV [Source:MGI Symbol;Acc:MGI:1921270]
10. Vti1a ENSMUSG00000024983 189 0.853 0.853 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:MGI Symbol;Acc:MGI:1855699]
11. Gm9967 ENSMUSG00000055323 7 0.851 0.851 - - - - - predicted gene 9967 [Source:MGI Symbol;Acc:MGI:3704300]
12. Gm6378 ENSMUSG00000062962 7 0.851 0.851 - - - - - predicted pseudogene 6378 [Source:MGI Symbol;Acc:MGI:3647253]
13. Tmem215 ENSMUSG00000046593 29 0.851 0.851 - - - - - transmembrane protein 215 [Source:MGI Symbol;Acc:MGI:2444167]
14. Gm11392 ENSMUSG00000097931 7 0.851 0.851 - - - - - predicted gene 11392 [Source:MGI Symbol;Acc:MGI:3649835]
15. Tlr1 ENSMUSG00000044827 9 0.851 0.851 - - - - - toll-like receptor 1 [Source:MGI Symbol;Acc:MGI:1341295]
16. Gm13657 ENSMUSG00000086813 15 0.851 0.851 - - - - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
17. Sec22c ENSMUSG00000061536 764 0.849 0.849 - - - - - SEC22 homolog C, vesicle trafficking protein [Source:MGI Symbol;Acc:MGI:2447871]
18. Gm14813 ENSMUSG00000082549 69 0.848 0.848 - - - - - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
19. Ficd ENSMUSG00000053334 130 0.847 0.847 - - - - - FIC domain containing [Source:MGI Symbol;Acc:MGI:1098550]
20. Snx11 ENSMUSG00000020876 41 0.846 0.846 - - - - - sorting nexin 11 [Source:MGI Symbol;Acc:MGI:1921729]
21. A730071L15Rik ENSMUSG00000096923 22 0.843 0.843 - - - - - RIKEN cDNA A730071L15Rik gene [Source:MGI Symbol;Acc:MGI:3642498]
22. Zfp12 ENSMUSG00000029587 706 0.842 - - 0.842 - - - zinc finger protein 12 [Source:MGI Symbol;Acc:MGI:99157]
23. Sh3tc2 ENSMUSG00000045629 69 0.84 - - 0.840 - - - SH3 domain and tetratricopeptide repeats 2 [Source:MGI Symbol;Acc:MGI:2444417]
24. Tmem223 87 0.84 0.840 - - - - - transmembrane protein 223
25. 1700019G17Rik 1700019G17Rik 54 0.84 0.840 - - - - -
26. Prdm10 ENSMUSG00000042496 118 0.839 0.839 - - - - - PR domain containing 10 [Source:MGI Symbol;Acc:MGI:2682952]
27. Gm10719 ENSMUSG00000095547 349 0.836 - - 0.836 - - - predicted gene 10719 [Source:MGI Symbol;Acc:MGI:3641690]
28. Gm10604 ENSMUSG00000073995 10 0.835 - - 0.835 - - - predicted gene 10604 [Source:MGI Symbol;Acc:MGI:3642593]
29. Creb3l3 ENSMUSG00000035041 46 0.835 - - 0.835 - - - cAMP responsive element binding protein 3-like 3 [Source:MGI Symbol;Acc:MGI:2384786]
30. Atp6ap1l ENSMUSG00000078958 12 0.835 - - 0.835 - - - ATPase, H+ transporting, lysosomal accessory protein 1-like [Source:MGI Symbol;Acc:MGI:3648665]
31. Gm26600 ENSMUSG00000097226 9 0.835 - - 0.835 - - - predicted gene, 26600 [Source:MGI Symbol;Acc:MGI:5477094]
32. Vgll1 ENSMUSG00000031131 10 0.833 0.833 - - - - - vestigial like family member 1 [Source:MGI Symbol;Acc:MGI:2655768]
33. Gm13302 ENSMUSG00000084010 20 0.833 - - 0.833 - - - predicted gene 13302 [Source:MGI Symbol;Acc:MGI:3705777]
34. Uap1l1 ENSMUSG00000026956 97 0.831 0.831 - - - - - UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 [Source:MGI Symbol;Acc:MGI:2443318]
35. Gm6222 ENSMUSG00000083019 145 0.829 0.829 - - - - - predicted pseudogene 6222 [Source:MGI Symbol;Acc:MGI:3648722]
36. Itga5 ENSMUSG00000000555 28 0.828 0.828 - - - - - integrin alpha 5 (fibronectin receptor alpha) [Source:MGI Symbol;Acc:MGI:96604]
37. Gdf2 ENSMUSG00000072625 45 0.828 - - 0.828 - - - growth differentiation factor 2 [Source:MGI Symbol;Acc:MGI:1321394]
38. 2510046G10Rik ENSMUSG00000066175 41 0.828 - - 0.828 - - - RIKEN cDNA 2510046G10 gene [Source:MGI Symbol;Acc:MGI:3698051]
39. Enpp1 ENSMUSG00000037370 109 0.828 0.828 - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:97370]
40. E430024P14Rik ENSMUSG00000090069 38 0.827 0.827 - - - - - RIKEN cDNA E430024P14 gene [Source:MGI Symbol;Acc:MGI:2445079]
41. Gm7008 ENSMUSG00000035983 55 0.826 - - 0.826 - - - predicted gene 7008 [Source:MGI Symbol;Acc:MGI:3647211]
42. Rbm46 ENSMUSG00000033882 99 0.825 - - 0.825 - - - RNA binding motif protein 46 [Source:MGI Symbol;Acc:MGI:3645057]
43. Gon4l ENSMUSG00000054199 31 0.824 - - 0.824 - - - gon-4-like (C.elegans) [Source:MGI Symbol;Acc:MGI:1917579]
44. Asb9 ENSMUSG00000031384 22 0.824 - - 0.824 - - - ankyrin repeat and SOCS box-containing 9 [Source:MGI Symbol;Acc:MGI:1916549]
45. Zmym6 ENSMUSG00000042408 218 0.82 - - 0.820 - - - zinc finger, MYM-type 6 [Source:MGI Symbol;Acc:MGI:106505]
46. Gm12668 ENSMUSG00000085817 60 0.82 - - 0.820 - - - predicted gene 12668 [Source:MGI Symbol;Acc:MGI:3651936]
47. Rora ENSMUSG00000032238 241 0.82 0.820 - - - - - RAR-related orphan receptor alpha [Source:MGI Symbol;Acc:MGI:104661]
48. Klhl3 ENSMUSG00000014164 43 0.819 0.819 - - - - - kelch-like 3 [Source:MGI Symbol;Acc:MGI:2445185]
49. Snx25 ENSMUSG00000038291 212 0.818 - - 0.818 - - - sorting nexin 25 [Source:MGI Symbol;Acc:MGI:2142610]
50. BC049762 ENSMUSG00000045942 41 0.817 - - 0.817 - - - cDNA sequence BC049762 [Source:MGI Symbol;Acc:MGI:3039622]
51. Map3k6 ENSMUSG00000028862 50 0.815 0.815 - - - - - mitogen-activated protein kinase kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1855691]
52. Hist1h2ai ENSMUSG00000071516 101 0.815 0.815 - - - - - histone cluster 1, H2ai [Source:MGI Symbol;Acc:MGI:2448457]
53. Optn ENSMUSG00000026672 36 0.815 - - 0.815 - - - optineurin [Source:MGI Symbol;Acc:MGI:1918898]
54. Ogn ENSMUSG00000021390 93 0.814 - - - - 0.814 - osteoglycin [Source:MGI Symbol;Acc:MGI:109278]
55. Pam16 ENSMUSG00000014301 14 0.814 - - 0.814 - - - presequence translocase-asssociated motor 16 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913699]
56. Oma1 ENSMUSG00000035069 489 0.813 - - 0.813 - - - OMA1 zinc metallopeptidase [Source:MGI Symbol;Acc:MGI:1914263]
57. A630001G21Rik ENSMUSG00000052760 86 0.813 - - 0.813 - - - RIKEN cDNA A630001G21 gene [Source:MGI Symbol;Acc:MGI:2443131]
58. Slc5a4b ENSMUSG00000020226 35 0.812 0.812 - - - - - solute carrier family 5 (neutral amino acid transporters, system A), member 4b [Source:MGI Symbol;Acc:MGI:1890478]
59. Abcg4 ENSMUSG00000032131 186 0.812 - - 0.812 - - - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
60. AI462493 AI462493 1120 0.81 - - 0.810 - - -
61. Tax1bp3 ENSMUSG00000040158 23 0.809 0.809 - - - - - Tax1 (human T cell leukemia virus type I) binding protein 3 [Source:MGI Symbol;Acc:MGI:1923531]
62. Gm13473 ENSMUSG00000083776 114 0.809 - - 0.809 - - - predicted gene 13473 [Source:MGI Symbol;Acc:MGI:3652338]
63. Cacng2 ENSMUSG00000019146 84 0.808 - - 0.808 - - - calcium channel, voltage-dependent, gamma subunit 2 [Source:MGI Symbol;Acc:MGI:1316660]
64. Prickle3 ENSMUSG00000031145 310 0.808 - - 0.808 - - - prickle planar cell polarity protein 3 [Source:MGI Symbol;Acc:MGI:1859635]
65. Kcnj15 ENSMUSG00000062609 31 0.808 - - 0.808 - - - potassium inwardly-rectifying channel, subfamily J, member 15 [Source:MGI Symbol;Acc:MGI:1310000]
66. Mgll ENSMUSG00000033174 157 0.807 0.807 - - - - - monoglyceride lipase [Source:MGI Symbol;Acc:MGI:1346042]
67. Rpl30-ps3 ENSMUSG00000080873 111 0.807 - - 0.807 - - - ribosomal protein L30, pseudogene 3 [Source:MGI Symbol;Acc:MGI:1321401]
68. Wdr24 ENSMUSG00000025737 577 0.806 - - 0.806 - - - WD repeat domain 24 [Source:MGI Symbol;Acc:MGI:2446285]
69. Gm24576 ENSMUSG00000093249 66 0.806 0.806 - - - - - predicted gene, 24576 [Source:MGI Symbol;Acc:MGI:5454353]
70. Capn5 ENSMUSG00000035547 387 0.805 0.805 - - - - - calpain 5 [Source:MGI Symbol;Acc:MGI:1100859]
71. 1110020A21Rik ENSMUSG00000097047 49 0.805 0.805 - - - - - RIKEN cDNA 1110020A21 gene [Source:MGI Symbol;Acc:MGI:1915781]
72. Prkca ENSMUSG00000050965 425 0.804 - - 0.804 - - - protein kinase C, alpha [Source:MGI Symbol;Acc:MGI:97595]
73. Tmem63a ENSMUSG00000026519 90 0.802 0.802 - - - - - transmembrane protein 63a [Source:MGI Symbol;Acc:MGI:2384789]
74. Gm26590 ENSMUSG00000097533 53 0.8 0.800 - - - - - predicted gene, 26590 [Source:MGI Symbol;Acc:MGI:5477084]
75. Ankrd29 ENSMUSG00000057766 352 0.798 - - 0.798 - - - ankyrin repeat domain 29 [Source:MGI Symbol;Acc:MGI:2687055]
76. Fgf18 ENSMUSG00000057967 46 0.797 0.797 - - - - - fibroblast growth factor 18 [Source:MGI Symbol;Acc:MGI:1277980]
77. Rgcc ENSMUSG00000022018 307 0.797 - - 0.797 - - - regulator of cell cycle [Source:MGI Symbol;Acc:MGI:1913464]
78. Chchd6 ENSMUSG00000030086 835 0.797 - - 0.797 - - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:MGI Symbol;Acc:MGI:1913348]
79. Gm10226 ENSMUSG00000067929 43 0.796 0.796 - - - - - predicted gene 10226 [Source:MGI Symbol;Acc:MGI:3704470]
80. Acer3 ENSMUSG00000030760 598 0.795 0.795 - - - - - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
81. Txndc5 ENSMUSG00000038991 2597 0.795 - - 0.795 - - - thioredoxin domain containing 5 [Source:MGI Symbol;Acc:MGI:2145316]
82. Dyrk1b ENSMUSG00000002409 201 0.794 0.794 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b [Source:MGI Symbol;Acc:MGI:1330302]
83. Maats1 ENSMUSG00000022805 60 0.793 0.793 - - - - - MYCBP-associated, testis expressed 1 [Source:MGI Symbol;Acc:MGI:2443598]
84. Sptlc1 ENSMUSG00000021468 2614 0.792 0.792 - - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:MGI Symbol;Acc:MGI:1099431]
85. Rps11-ps3 ENSMUSG00000081715 74 0.792 - - 0.792 - - - ribosomal protein S11, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3649802]
86. Asz1 ENSMUSG00000010796 17 0.792 0.792 - - - - - ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:MGI Symbol;Acc:MGI:1921318]
87. Tln2 ENSMUSG00000052698 938 0.791 0.791 - - - - - talin 2 [Source:MGI Symbol;Acc:MGI:1917799]
88. Dpagt1 ENSMUSG00000032123 1234 0.791 - - 0.791 - - - dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) [Source:MGI Symbol;Acc:MGI:1196396]
89. Ap1s3 ENSMUSG00000054702 166 0.79 0.790 - - - - - adaptor-related protein complex AP-1, sigma 3 [Source:MGI Symbol;Acc:MGI:1891304]
90. Gm13423 ENSMUSG00000081648 80 0.79 - - 0.790 - - - predicted gene 13423 [Source:MGI Symbol;Acc:MGI:3650165]
91. Chpf2 ENSMUSG00000038181 62 0.79 0.790 - - - - - chondroitin polymerizing factor 2 [Source:MGI Symbol;Acc:MGI:1917522]
92. Tead4 ENSMUSG00000030353 186 0.789 - - 0.789 - - - TEA domain family member 4 [Source:MGI Symbol;Acc:MGI:106907]
93. Vps11 ENSMUSG00000032127 317 0.788 0.788 - - - - - VPS11, CORVET/HOPS core subunit [Source:MGI Symbol;Acc:MGI:1918982]
94. Fam228a ENSMUSG00000079177 14 0.787 0.787 - - - - - family with sequence similarity 228, member A [Source:MGI Symbol;Acc:MGI:1922105]
95. Zcchc14 ENSMUSG00000061410 1142 0.787 - - 0.787 - - - zinc finger, CCHC domain containing 14 [Source:MGI Symbol;Acc:MGI:2159407]
96. Fxyd5 ENSMUSG00000009687 116 0.786 - - 0.786 - - - FXYD domain-containing ion transport regulator 5 [Source:MGI Symbol;Acc:MGI:1201785]
97. Gm7452 ENSMUSG00000107310 296 0.785 0.785 - - - - - predicted pseudogene 7452 [Source:MGI Symbol;Acc:MGI:3645151]
98. Scarf1 ENSMUSG00000038188 128 0.785 - - 0.785 - - - scavenger receptor class F, member 1 [Source:MGI Symbol;Acc:MGI:2449455]
99. Fam211b Fam211b 102 0.783 - - 0.783 - - -
100. Csnk1g3 ENSMUSG00000073563 4431 0.782 - - 0.782 - - - casein kinase 1, gamma 3 [Source:MGI Symbol;Acc:MGI:1917675]

There are 127 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA