Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Human data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMN1

Gene Name Gene ID Reads Annotation
SMN1 ENSG00000172062, ENSG00000275349 4 survival of motor neuron 1, telomeric [Source:HGNC Symbol;Acc:HGNC:11117]



Genes with expression patterns similar to SMN1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SMN1 ENSG00000172062, ENSG00000275349 4 2 1.000 1.000 survival of motor neuron 1, telomeric [Source:HGNC Symbol;Acc:HGNC:11117]
2. PVRIG ENSG00000213413 7 1.863 0.941 0.922 PVR related immunoglobulin domain containing [Source:HGNC Symbol;Acc:HGNC:32190]
3. LOC153684 5 1 1.000 - uncharacterized LOC153684
4. ANKRD36BP2 ENSG00000230006 4 1 1.000 - ankyrin repeat domain 36B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:33607]
5. LINC01016 ENSG00000249346 3 1 1.000 - long intergenic non-protein coding RNA 1016 [Source:HGNC Symbol;Acc:HGNC:48991]
6. CRH ENSG00000147571 2 1 1.000 - corticotropin releasing hormone [Source:HGNC Symbol;Acc:HGNC:2355]
7. ELANE ENSG00000197561, ENSG00000277571 2 1 1.000 - elastase, neutrophil expressed [Source:HGNC Symbol;Acc:HGNC:3309]
8. GALNT5 ENSG00000136542 5 1 1.000 - polypeptide N-acetylgalactosaminyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4127]
9. C2CD4D ENSG00000225556 2 1 1.000 - C2 calcium dependent domain containing 4D [Source:HGNC Symbol;Acc:HGNC:37210]
10. LOC100507073 2 1 1.000 - uncharacterized LOC100507073
11. LINC01304 ENSG00000237401 2 1 1.000 - long intergenic non-protein coding RNA 1304 [Source:HGNC Symbol;Acc:HGNC:50472]
12. RSPH6A ENSG00000104941 2 1 1.000 - radial spoke head 6 homolog A [Source:HGNC Symbol;Acc:HGNC:14241]
13. MIR202HG ENSG00000166917 6 1 1.000 - MIR202 host gene [Source:HGNC Symbol;Acc:HGNC:49402]
14. OTC ENSG00000036473 13 1 1.000 - ornithine carbamoyltransferase [Source:HGNC Symbol;Acc:HGNC:8512]
15. LOC100506076 2 1 1.000 - uncharacterized LOC100506076, transcript variant 1
16. TTC23L ENSG00000205838 2 1 1.000 - tetratricopeptide repeat domain 23 like [Source:HGNC Symbol;Acc:HGNC:26355]
17. MAPT-IT1 ENSG00000279685, ENSG00000281284, ENSG00000282620 12 1 1.000 - MAPT intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:43741]
18. CD19 ENSG00000177455 22 1 1.000 - CD19 molecule [Source:HGNC Symbol;Acc:HGNC:1633]
19. PI4KAP1 ENSG00000274602 4 1 1.000 - phosphatidylinositol 4-kinase alpha pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:33576]
20. LINC00269 ENSG00000215162 3 1 1.000 - long intergenic non-protein coding RNA 269 [Source:HGNC Symbol;Acc:HGNC:26586]
21. AMTN ENSG00000187689 4 1 1.000 - amelotin [Source:HGNC Symbol;Acc:HGNC:33188]
22. HIST1H2BO ENSG00000274641 9 1 1.000 - histone cluster 1 H2B family member o [Source:HGNC Symbol;Acc:HGNC:4758]
23. LINC00941 ENSG00000235884, ENSG00000285517 3 1 1.000 - long intergenic non-protein coding RNA 941 [Source:NCBI gene;Acc:100287314]
24. PILRB ENSG00000121716 4 1 1.000 - paired immunoglobin-like type 2 receptor beta [Source:HGNC Symbol;Acc:HGNC:18297]
25. GPRC5D ENSG00000111291 2 1 1.000 - G protein-coupled receptor class C group 5 member D [Source:HGNC Symbol;Acc:HGNC:13310]
26. MIR3976HG ENSG00000261738 2 1 1.000 - MIR3976 host gene [Source:HGNC Symbol;Acc:HGNC:51104]
27. SLAMF8 ENSG00000158714 2 1 1.000 - SLAM family member 8 [Source:HGNC Symbol;Acc:HGNC:21391]
28. MLXIPL ENSG00000009950 11 1 1.000 - MLX interacting protein like [Source:HGNC Symbol;Acc:HGNC:12744]
29. DLGAP3 ENSG00000116544 9 1 1.000 - DLG associated protein 3 [Source:HGNC Symbol;Acc:HGNC:30368]
30. CYP4Z1 ENSG00000186160 9 0.971 0.971 - cytochrome P450 family 4 subfamily Z member 1 [Source:HGNC Symbol;Acc:HGNC:20583]
31. LINC00911 ENSG00000259107 1 0.922 - 0.922 long intergenic non-protein coding RNA 911 [Source:HGNC Symbol;Acc:HGNC:48596]
32. SNTN ENSG00000188817 3 0.922 - 0.922 sentan, cilia apical structure protein [Source:HGNC Symbol;Acc:HGNC:33706]
33. FOXR1 ENSG00000176302, ENSG00000281277 1 0.922 - 0.922 forkhead box R1 [Source:HGNC Symbol;Acc:HGNC:29980]
34. INMT-FAM188B 1 0.922 - 0.922 INMT-FAM188B readthrough (NMD candidate)
35. PSG11 ENSG00000243130 1 0.922 - 0.922 pregnancy specific beta-1-glycoprotein 11 [Source:HGNC Symbol;Acc:HGNC:9516]
36. AADACL3 ENSG00000188984 2 0.922 - 0.922 arylacetamide deacetylase like 3 [Source:HGNC Symbol;Acc:HGNC:32037]
37. RGPD8 ENSG00000169629 1 0.922 - 0.922 RANBP2-like and GRIP domain containing 8 [Source:HGNC Symbol;Acc:HGNC:9849]
38. OMG ENSG00000126861 1 0.922 - 0.922 oligodendrocyte myelin glycoprotein [Source:HGNC Symbol;Acc:HGNC:8135]
39. LINC01229 ENSG00000260876 6 0.913 0.913 - long intergenic non-protein coding RNA 1229 [Source:HGNC Symbol;Acc:HGNC:49682]
40. PRTN3 ENSG00000196415, ENSG00000277804 24 0.906 0.906 - proteinase 3 [Source:HGNC Symbol;Acc:HGNC:9495]
41. ADGRG5 ENSG00000159618 23 0.887 0.887 - adhesion G protein-coupled receptor G5 [Source:HGNC Symbol;Acc:HGNC:19010]
42. DMRT1 ENSG00000137090 16 0.88 0.880 - doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
43. INTS4P2 ENSG00000273024 5 0.86 0.860 - integrator complex subunit 4 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:22351]
44. C8B ENSG00000021852 6 0.856 - 0.856 complement C8 beta chain [Source:HGNC Symbol;Acc:HGNC:1353]
45. PLEK2 ENSG00000100558 40 0.84 0.840 - pleckstrin 2 [Source:HGNC Symbol;Acc:HGNC:19238]
46. SMIM6 ENSG00000259120 3 0.835 - 0.835 small integral membrane protein 6 [Source:HGNC Symbol;Acc:HGNC:40032]
47. C7orf66 ENSG00000205174 2 0.823 - 0.823 chromosome 7 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:33712]
48. LRIT2 ENSG00000204033 6 0.821 0.821 - leucine rich repeat, Ig-like and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:23443]
49. C1orf204 18 0.816 0.816 - chromosome 1 open reading frame 204
50. FLJ38576 ENSG00000279943 11 0.814 0.814 - uncharacterized LOC651430 [Source:NCBI gene;Acc:651430]
51. TEX26 ENSG00000175664 7 0.804 0.804 - testis expressed 26 [Source:HGNC Symbol;Acc:HGNC:28622]
52. SPATA41 ENSG00000189419 21 0.804 0.804 - spermatogenesis associated 41 [Source:HGNC Symbol;Acc:HGNC:48613]
53. PCDHGA11 ENSG00000253873 4 0.804 0.804 - protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:HGNC:8698]
54. ERV3-1 ENSG00000213462 25 0.802 0.802 - endogenous retrovirus group 3 member 1, envelope [Source:HGNC Symbol;Acc:HGNC:3454]
55. C5orf66 ENSG00000224186 9 0.79 0.790 - chromosome 5 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:48332]
56. CD38 ENSG00000004468 8 0.784 0.784 - CD38 molecule [Source:HGNC Symbol;Acc:HGNC:1667]
57. LOC414300 2 0.772 - 0.772 uncharacterized LOC414300
58. CCDC110 ENSG00000168491 19 0.769 0.769 - coiled-coil domain containing 110 [Source:HGNC Symbol;Acc:HGNC:28504]
59. AGAP7P ENSG00000264204 1 0.768 - 0.768 ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene [Source:HGNC Symbol;Acc:HGNC:23465]
60. ADAM20P1 ENSG00000259158 6 0.76 0.760 - ADAM metallopeptidase domain 20 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:20102]
61. VNN1 ENSG00000112299 9 0.741 0.741 - vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]
62. LINC00211 ENSG00000237803 11 0.741 0.741 - long intergenic non-protein coding RNA 211 [Source:HGNC Symbol;Acc:HGNC:37459]
63. LINC01424 ENSG00000236519 19 0.735 0.735 - long intergenic non-protein coding RNA 1424 [Source:HGNC Symbol;Acc:HGNC:40558]
64. LOC102723927 9 0.733 0.733 - uncharacterized LOC102723927
65. DOCK9-AS1 ENSG00000229918 3 0.733 0.733 - DOCK9 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40672]
66. MRGPRF ENSG00000172935 68 0.715 0.715 - MAS related GPR family member F [Source:HGNC Symbol;Acc:HGNC:24828]
67. CD79A ENSG00000105369 11 0.715 0.715 - CD79a molecule [Source:HGNC Symbol;Acc:HGNC:1698]
68. NCRNA00250 ENSG00000253433 6 0.704 - 0.704 non-protein coding RNA 250 [Source:NCBI gene;Acc:552853]
69. NOMO2 ENSG00000185164 2 0.702 - 0.702 NODAL modulator 2 [Source:HGNC Symbol;Acc:HGNC:22652]
70. HIST1H3B ENSG00000274267 24 0.701 0.701 - histone cluster 1 H3 family member b [Source:HGNC Symbol;Acc:HGNC:4776]
71. RHBDL1 ENSG00000103269 4 0.701 0.701 - rhomboid like 1 [Source:HGNC Symbol;Acc:HGNC:10007]
72. CARD6 ENSG00000132357 27 0.701 0.701 - caspase recruitment domain family member 6 [Source:HGNC Symbol;Acc:HGNC:16394]
73. TESPA1 ENSG00000135426 8 0.701 0.701 - thymocyte expressed, positive selection associated 1 [Source:HGNC Symbol;Acc:HGNC:29109]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA