Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC01117

Gene Name Gene ID Reads Annotation
LINC01117 ENSG00000224577 9 long intergenic non-protein coding RNA 1117 [Source:HGNC Symbol;Acc:HGNC:49260]



Genes with expression patterns similar to LINC01117

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC01117 ENSG00000224577 9 2 1.000 1.000 long intergenic non-protein coding RNA 1117 [Source:HGNC Symbol;Acc:HGNC:49260]
2. SLC23A3 ENSG00000213901 10 1 1.000 - solute carrier family 23 member 3 [Source:HGNC Symbol;Acc:HGNC:20601]
3. OGFRP1 ENSG00000182057 3 0.875 0.875 - opioid growth factor receptor pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50511]
4. CERKL ENSG00000188452 4 0.875 0.875 - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
5. VN1R1 ENSG00000178201 6 0.875 0.875 - vomeronasal 1 receptor 1 [Source:HGNC Symbol;Acc:HGNC:13548]
6. SNORA51 ENSG00000271798 3 0.875 0.875 - small nucleolar RNA, H/ACA box 51 [Source:HGNC Symbol;Acc:HGNC:32644]
7. FAM47A ENSG00000185448 3 0.875 0.875 - family with sequence similarity 47 member A [Source:HGNC Symbol;Acc:HGNC:29962]
8. SLA2 ENSG00000101082 7 0.875 0.875 - Src like adaptor 2 [Source:HGNC Symbol;Acc:HGNC:17329]
9. MUSK ENSG00000030304 4 0.875 0.875 - muscle associated receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:7525]
10. TRPM3 ENSG00000083067 10 0.875 0.875 - transient receptor potential cation channel subfamily M member 3 [Source:HGNC Symbol;Acc:HGNC:17992]
11. SYCP1 ENSG00000198765 11 0.875 0.875 - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
12. DMP1 ENSG00000152592 4 0.875 0.875 - dentin matrix acidic phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:2932]
13. DPEP3 ENSG00000141096 28 0.875 0.875 - dipeptidase 3 [Source:HGNC Symbol;Acc:HGNC:23029]
14. THEMIS ENSG00000172673, ENSG00000275122 3 0.851 - 0.851 thymocyte selection associated [Source:HGNC Symbol;Acc:HGNC:21569]
15. CYP4F12 ENSG00000186204 1 0.851 - 0.851 cytochrome P450 family 4 subfamily F member 12 [Source:HGNC Symbol;Acc:HGNC:18857]
16. PWRN4 ENSG00000260232 1 0.851 - 0.851 Prader-Willi region non-protein coding RNA 4 [Source:HGNC Symbol;Acc:HGNC:49130]
17. LINC01322 ENSG00000244128 1 0.851 - 0.851 long intergenic non-protein coding RNA 1322 [Source:HGNC Symbol;Acc:HGNC:50528]
18. PGLYRP4 ENSG00000163218 3 0.851 - 0.851 peptidoglycan recognition protein 4 [Source:HGNC Symbol;Acc:HGNC:30015]
19. HTR3C ENSG00000178084 4 0.851 - 0.851 5-hydroxytryptamine receptor 3C [Source:HGNC Symbol;Acc:HGNC:24003]
20. LOC102723373 2 0.851 - 0.851 uncharacterized LOC102723373
21. ST8SIA6 ENSG00000148488 1 0.851 - 0.851 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:23317]
22. PAGE2 ENSG00000234068 1 0.851 - 0.851 PAGE family member 2 [Source:HGNC Symbol;Acc:HGNC:31804]
23. CFAP44-AS1 ENSG00000243849 2 0.851 - 0.851 CFAP44 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41113]
24. LOC101928540 1 0.851 - 0.851 uncharacterized LOC101928540
25. LOC101928565 1 0.848 - 0.848 uncharacterized LOC101928565
26. PLEKHN1 ENSG00000187583 5 0.837 - 0.837 pleckstrin homology domain containing N1 [Source:HGNC Symbol;Acc:HGNC:25284]
27. FOXN3-AS2 ENSG00000259073 7 0.837 - 0.837 FOXN3 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:30119]
28. CASC16 ENSG00000249231 4 0.837 - 0.837 cancer susceptibility 16 [Source:HGNC Symbol;Acc:HGNC:48608]
29. HCG4 ENSG00000176998, ENSG00000224564, ENSG00000225346, ENSG00000226379, ENSG00000228706, ENSG00000235317, ENSG00000236225, ENSG00000237905 3 0.837 - 0.837 HLA complex group 4 [Source:HGNC Symbol;Acc:HGNC:21241]
30. PCDHGA6 ENSG00000253731 1 0.836 - 0.836 protocadherin gamma subfamily A, 6 [Source:HGNC Symbol;Acc:HGNC:8704]
31. CNTN4-AS1 ENSG00000237990 11 0.835 0.835 - CNTN4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39985]
32. SPRR1B ENSG00000169469 3 0.835 - 0.835 small proline rich protein 1B [Source:HGNC Symbol;Acc:HGNC:11260]
33. LINC01197 ENSG00000248441 9 0.819 - 0.819 long intergenic non-protein coding RNA 1197 [Source:HGNC Symbol;Acc:HGNC:49597]
34. LOC283045 5 0.811 - 0.811 uncharacterized LOC283045
35. LOC101929608 9 0.797 0.797 - uncharacterized LOC101929608
36. LOC286370 LOC286370 2 0.795 - 0.795
37. TOMM20L ENSG00000196860 7 0.794 0.794 - translocase of outer mitochondrial membrane 20 like [Source:HGNC Symbol;Acc:HGNC:33752]
38. AATBC ENSG00000215458 8 0.789 - 0.789 apoptosis associated transcript in bladder cancer [Source:HGNC Symbol;Acc:HGNC:51526]
39. LY86-AS1 ENSG00000216863 25 0.784 - 0.784 LY86 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26593]
40. LINC00906 ENSG00000267339 8 0.78 0.780 - long intergenic non-protein coding RNA 906 [Source:HGNC Symbol;Acc:HGNC:27121]
41. HCG14 ENSG00000224157, ENSG00000227559, ENSG00000230004, ENSG00000234411, ENSG00000236835, ENSG00000237010 31 0.775 0.775 - HLA complex group 14 [Source:HGNC Symbol;Acc:HGNC:18323]
42. AQP9 ENSG00000103569 3 0.767 - 0.767 aquaporin 9 [Source:HGNC Symbol;Acc:HGNC:643]
43. GPC5-AS1 ENSG00000235984 9 0.764 - 0.764 GPC5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39886]
44. TNFSF8 ENSG00000106952 23 0.763 - 0.763 TNF superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11938]
45. MIP ENSG00000135517 5 0.763 - 0.763 major intrinsic protein of lens fiber [Source:HGNC Symbol;Acc:HGNC:7103]
46. KRT27 ENSG00000171446 4 0.758 0.758 - keratin 27 [Source:HGNC Symbol;Acc:HGNC:30841]
47. PVRL3-AS1 7 0.753 0.753 - PVRL3 antisense RNA 1
48. ERICH6 ENSG00000163645 6 0.745 0.745 - glutamate rich 6 [Source:HGNC Symbol;Acc:HGNC:28602]
49. LOC101927636 24 0.744 - 0.744 uncharacterized LOC101927636
50. LOC100505530 2 0.741 - 0.741 uncharacterized LOC100505530
51. SIGLEC14 ENSG00000254415 42 0.735 - 0.735 sialic acid binding Ig like lectin 14 [Source:HGNC Symbol;Acc:HGNC:32926]
52. LRMP ENSG00000118308 14 0.733 0.733 - lymphoid restricted membrane protein [Source:HGNC Symbol;Acc:HGNC:6690]
53. MSH4 ENSG00000057468 11 0.731 0.731 - mutS homolog 4 [Source:HGNC Symbol;Acc:HGNC:7327]
54. MATK ENSG00000007264 2 0.721 - 0.721 megakaryocyte-associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6906]
55. TP53AIP1 ENSG00000120471 23 0.711 - 0.711 tumor protein p53 regulated apoptosis inducing protein 1 [Source:HGNC Symbol;Acc:HGNC:29984]
56. LOC101927178 77 0.709 - 0.709 uncharacterized LOC101927178
57. OTOS ENSG00000178602 6 0.709 - 0.709 otospiralin [Source:HGNC Symbol;Acc:HGNC:22644]
58. BCAR4 ENSG00000262117 6 0.708 - 0.708 breast cancer anti-estrogen resistance 4 [Source:HGNC Symbol;Acc:HGNC:22170]
59. GABARAPL3 ENSG00000238244 2 0.708 - 0.708 GABA type A receptor associated protein like 3 pseudogene [Source:HGNC Symbol;Acc:HGNC:4069]
60. RTCA-AS1 ENSG00000224616 9 0.707 0.707 - RTCA antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50573]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA