Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HLA-F

Gene Name Gene ID Reads Annotation
HLA-F ENSG00000137403, ENSG00000204642, ENSG00000206509, ENSG00000229698, ENSG00000234487, ENSG00000235220, ENSG00000237508 1 major histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:HGNC:4963]



Genes with expression patterns similar to HLA-F

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. GPX6 ENSG00000198704, ENSG00000281185 3 2 1.000 1.000 glutathione peroxidase 6 [Source:NCBI gene;Acc:257202]
2. HLA-F ENSG00000137403, ENSG00000204642, ENSG00000206509, ENSG00000229698, ENSG00000234487, ENSG00000235220, ENSG00000237508 1 2 1.000 1.000 major histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:HGNC:4963]
3. NEU4 ENSG00000204099, ENSG00000277926 7 1 - 1.000 neuraminidase 4 [Source:HGNC Symbol;Acc:HGNC:21328]
4. PRPF40B ENSG00000110844 10 1 1.000 - pre-mRNA processing factor 40 homolog B [Source:HGNC Symbol;Acc:HGNC:25031]
5. LINC01532 ENSG00000267014 0 1 - 1.000 long intergenic non-protein coding RNA 1532 [Source:HGNC Symbol;Acc:HGNC:51272]
6. LINC00264 0 1 - 1.000 long intergenic non-protein coding RNA 264
7. EHD4-AS1 ENSG00000259883 3 1 - 1.000 EHD4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51418]
8. OR5K3 ENSG00000206536 2 1 1.000 - olfactory receptor family 5 subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:31290]
9. ARHGAP26-AS1 ENSG00000226272 0 1 - 1.000 ARHGAP26 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40792]
10. LOC101927244 2 1 - 1.000 uncharacterized LOC101927244
11. LOC100130872 2 1 - 1.000 uncharacterized LOC100130872
12. SFTA2 ENSG00000196260, ENSG00000206465, ENSG00000224246, ENSG00000225454, ENSG00000230072, ENSG00000237814 6 1 1.000 - surfactant associated 2 [Source:HGNC Symbol;Acc:HGNC:18386]
13. BSND ENSG00000162399 0 1 - 1.000 barttin CLCNK type accessory beta subunit [Source:HGNC Symbol;Acc:HGNC:16512]
14. PDF ENSG00000258429 0 1 - 1.000 peptide deformylase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:30012]
15. LOC100131626 0 1 - 1.000 uncharacterized LOC100131626, transcript variant 2
16. SLCO1B1 ENSG00000134538 1 1 - 1.000 solute carrier organic anion transporter family member 1B1 [Source:HGNC Symbol;Acc:HGNC:10959]
17. OR6C68 ENSG00000205327 3 1 - 1.000 olfactory receptor family 6 subfamily C member 68 [Source:HGNC Symbol;Acc:HGNC:31297]
18. MS4A3 ENSG00000149516 9 1 1.000 - membrane spanning 4-domains A3 [Source:HGNC Symbol;Acc:HGNC:7317]
19. HELT ENSG00000187821 0 1 - 1.000 helt bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:33783]
20. LOC102724550 LOC102724550 0 1 - 1.000
21. TMEM26-AS1 ENSG00000237233 2 1 1.000 - TMEM26 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51209]
22. HTN3 ENSG00000205649, ENSG00000282967 0 1 - 1.000 histatin 3 [Source:HGNC Symbol;Acc:HGNC:5284]
23. TEX11 ENSG00000120498 65 1 1.000 - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
24. LINC01539 ENSG00000267712 0 1 - 1.000 long intergenic non-protein coding RNA 1539 [Source:HGNC Symbol;Acc:HGNC:51307]
25. CHAT ENSG00000070748 1 1 1.000 - choline O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:1912]
26. CTAGE11P ENSG00000214249 8 1 1.000 - CTAGE family member 11, pseudogene [Source:HGNC Symbol;Acc:HGNC:37293]
27. FLJ34503 ENSG00000175967 4 1 1.000 - uncharacterized FLJ34503 [Source:NCBI gene;Acc:285759]
28. LINC01233 ENSG00000269364 4 1 1.000 - long intergenic non-protein coding RNA 1233 [Source:HGNC Symbol;Acc:HGNC:49756]
29. TMC1 ENSG00000165091 1 1 1.000 - transmembrane channel like 1 [Source:HGNC Symbol;Acc:HGNC:16513]
30. CYP17A1 ENSG00000148795 1 1 - 1.000 cytochrome P450 family 17 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2593]
31. SDR16C5 ENSG00000170786 8 1 - 1.000 short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
32. GML ENSG00000104499 0 1 - 1.000 glycosylphosphatidylinositol anchored molecule like [Source:HGNC Symbol;Acc:HGNC:4375]
33. INHBC ENSG00000175189 2 1 1.000 - inhibin subunit beta C [Source:HGNC Symbol;Acc:HGNC:6068]
34. LOC101927003 LOC101927003 0 1 - 1.000
35. PROC ENSG00000115718 4 1 1.000 - protein C, inactivator of coagulation factors Va and VIIIa [Source:HGNC Symbol;Acc:HGNC:9451]
36. LOC339260 0 1 - 1.000 uncharacterized LOC339260
37. C10orf120 ENSG00000183559 2 1 1.000 - chromosome 10 open reading frame 120 [Source:HGNC Symbol;Acc:HGNC:25707]
38. OR2AG2 ENSG00000188124 1 1 - 1.000 olfactory receptor family 2 subfamily AG member 2 [Source:HGNC Symbol;Acc:HGNC:15143]
39. CECR7 ENSG00000237438 3 1 1.000 - cat eye syndrome chromosome region, candidate 7 [Source:HGNC Symbol;Acc:HGNC:1845]
40. LINC00974 ENSG00000226629 1 1 - 1.000 long intergenic non-protein coding RNA 974 [Source:HGNC Symbol;Acc:HGNC:27105]
41. LOC101927082 1 1 1.000 - uncharacterized LOC101927082
42. LOC101928270 0 1 - 1.000 uncharacterized LOC101928270
43. FOXA3 ENSG00000170608 24 1 1.000 - forkhead box A3 [Source:HGNC Symbol;Acc:HGNC:5023]
44. SLC9A2 ENSG00000115616 6 1 - 1.000 solute carrier family 9 member A2 [Source:HGNC Symbol;Acc:HGNC:11072]
45. SLC28A3 ENSG00000197506 2 1 - 1.000 solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
46. LOC645949 2 1 1.000 - uncharacterized LOC645949
47. FAM183CP 1 1 - 1.000 family with sequence similarity 183 member C, pseudogene
48. Dec-01 Dec-01 0 1 - 1.000
49. TTC16 ENSG00000167094 1 1 1.000 - tetratricopeptide repeat domain 16 [Source:HGNC Symbol;Acc:HGNC:26536]
50. STAG3L5P-PVRIG2P-PILRB ENSG00000272752 6 1 1.000 - STAG3L5P-PVRIG2P-PILRB readthrough [Source:HGNC Symbol;Acc:HGNC:48898]
51. LINC01537 ENSG00000227467 5 1 1.000 - long intergenic non-protein coding RNA 1537 [Source:HGNC Symbol;Acc:HGNC:51301]
52. FAM212B-AS1 0 1 - 1.000 FAM212B antisense RNA 1, transcript variant 2
53. PTPRVP ENSG00000243323 1 1 1.000 - protein tyrosine phosphatase, receptor type V, pseudogene [Source:HGNC Symbol;Acc:HGNC:13421]
54. PDZK1P2 PDZK1P2 2 1 - 1.000
55. ERICH5 ENSG00000177459 22 1 1.000 - glutamate rich 5 [Source:HGNC Symbol;Acc:HGNC:26823]
56. MMP24 ENSG00000125966 0 1 - 1.000 matrix metallopeptidase 24 [Source:HGNC Symbol;Acc:HGNC:7172]
57. TCL6 ENSG00000187621 1 1 1.000 - T cell leukemia/lymphoma 6 [Source:HGNC Symbol;Acc:HGNC:13463]
58. SEMG2 ENSG00000124157 2 1 - 1.000 semenogelin 2 [Source:HGNC Symbol;Acc:HGNC:10743]
59. TSPAN1 ENSG00000117472 7 1 - 1.000 tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]
60. CXCR3 ENSG00000186810 3 1 - 1.000 C-X-C motif chemokine receptor 3 [Source:HGNC Symbol;Acc:HGNC:4540]
61. APOBEC3B ENSG00000179750 10 1 1.000 - apolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]
62. CNPY1 ENSG00000146910 2 1 1.000 - canopy FGF signaling regulator 1 [Source:HGNC Symbol;Acc:HGNC:27786]
63. FOXD4L6 ENSG00000273514 0 1 - 1.000 forkhead box D4 like 6 [Source:HGNC Symbol;Acc:HGNC:31986]
64. ACP5 ENSG00000102575 16 1 1.000 - acid phosphatase 5, tartrate resistant [Source:HGNC Symbol;Acc:HGNC:124]
65. C12orf54 ENSG00000177627 2 1 1.000 - chromosome 12 open reading frame 54 [Source:HGNC Symbol;Acc:HGNC:28553]
66. CASP1 ENSG00000137752 8 1 1.000 - caspase 1 [Source:HGNC Symbol;Acc:HGNC:1499]
67. CAPN13 ENSG00000162949 0 1 - 1.000 calpain 13 [Source:HGNC Symbol;Acc:HGNC:16663]
68. DLG1-AS1 ENSG00000227375 0 1 - 1.000 DLG1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44154]
69. TMED6 ENSG00000157315 9 1 1.000 - transmembrane p24 trafficking protein 6 [Source:HGNC Symbol;Acc:HGNC:28331]
70. ANKRD20A11P ENSG00000215559 1 1 1.000 - ankyrin repeat domain 20 family member A11, pseudogene [Source:HGNC Symbol;Acc:HGNC:42024]
71. LYPD2 ENSG00000197353 2 1 - 1.000 LY6/PLAUR domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25215]
72. LINC00612 ENSG00000214851 2 1 1.000 - long intergenic non-protein coding RNA 612 [Source:HGNC Symbol;Acc:HGNC:28621]
73. IL1RL1 ENSG00000115602 17 1 1.000 - interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]
74. ARRDC5 ENSG00000205784 2 1 - 1.000 arrestin domain containing 5 [Source:HGNC Symbol;Acc:HGNC:31407]
75. GNRHR ENSG00000109163 3 1 - 1.000 gonadotropin releasing hormone receptor [Source:HGNC Symbol;Acc:HGNC:4421]
76. SLC5A1 ENSG00000100170 0 1 - 1.000 solute carrier family 5 member 1 [Source:HGNC Symbol;Acc:HGNC:11036]
77. NME8 ENSG00000086288 3 1 1.000 - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
78. HEATR4 ENSG00000187105 2 1 - 1.000 HEAT repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:16761]
79. GSTA7P ENSG00000237674 3 1 - 1.000 glutathione S-transferase alpha 7, pseudogene [Source:HGNC Symbol;Acc:HGNC:4631]
80. SLC22A2 ENSG00000112499 1 1 - 1.000 solute carrier family 22 member 2 [Source:HGNC Symbol;Acc:HGNC:10966]
81. PLA2G5 ENSG00000127472 2 1 1.000 - phospholipase A2 group V [Source:HGNC Symbol;Acc:HGNC:9038]
82. LSAMP-AS1 ENSG00000240922 2 1 1.000 - LSAMP antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40350]
83. RELL2 ENSG00000164620 0 1 - 1.000 RELT like 2 [Source:HGNC Symbol;Acc:HGNC:26902]
84. SERHL ENSG00000172250 0 1 - 1.000 serine hydrolase-like (pseudogene) [Source:HGNC Symbol;Acc:HGNC:14408]
85. TMEM207 ENSG00000198398 3 1 1.000 - transmembrane protein 207 [Source:HGNC Symbol;Acc:HGNC:33705]
86. LOC101927020 2 1 - 1.000 uncharacterized LOC101927020
87. ST6GALNAC1 ENSG00000070526 15 1 1.000 - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23614]
88. IL21-AS1 ENSG00000227145 0 1 - 1.000 IL21 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40299]
89. TCHHL1 ENSG00000182898 8 0.993 - 0.993 trichohyalin like 1 [Source:HGNC Symbol;Acc:HGNC:31796]
90. DAZL ENSG00000092345 3 0.968 - 0.968 deleted in azoospermia like [Source:HGNC Symbol;Acc:HGNC:2685]
91. ZPBP ENSG00000042813 2 0.967 - 0.967 zona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]
92. OVOL1 ENSG00000172818 23 0.963 - 0.963 ovo like transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:8525]
93. LRRIQ3 ENSG00000162620 7 0.943 0.943 - leucine rich repeats and IQ motif containing 3 [Source:HGNC Symbol;Acc:HGNC:28318]
94. TGM1 ENSG00000092295, ENSG00000285348 16 0.941 - 0.941 transglutaminase 1 [Source:HGNC Symbol;Acc:HGNC:11777]
95. ANKS4B ENSG00000175311, ENSG00000284290 5 0.941 - 0.941 ankyrin repeat and sterile alpha motif domain containing 4B [Source:HGNC Symbol;Acc:HGNC:26795]
96. LINC01489 ENSG00000255727 0 0.941 - 0.941 long intergenic non-protein coding RNA 1489 [Source:HGNC Symbol;Acc:HGNC:51145]
97. TNP1 ENSG00000118245 0 0.941 - 0.941 transition protein 1 [Source:HGNC Symbol;Acc:HGNC:11951]
98. SLC25A31 ENSG00000151475 1 0.884 - 0.884 solute carrier family 25 member 31 [Source:HGNC Symbol;Acc:HGNC:25319]
99. EGFLAM-AS2 ENSG00000248572 1 0.882 - 0.882 EGFLAM antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:41168]
100. C2orf16 ENSG00000221843 4 0.878 - 0.878 chromosome 2 open reading frame 16 [Source:HGNC Symbol;Acc:HGNC:25275]

There are 34 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA